RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 SNAPC4Q5SXM2 1469 aa2.16□□□□□ -2.06
XRN1-213ENST00000489241 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
XRN1-213ENST00000489241 A0A1W2PNM2 257 aa2.16□□□□□ -2.06
XRN1-213ENST00000489241 C19orf71A6NCJ1 209 aa2.16□□□□□ -2.06
XRN1-213ENST00000489241 C17orf98A8MV24 154 aa2.16□□□□□ -2.06
XRN1-213ENST00000489241 KCNK1O00180 336 aa2.16□□□□□ -2.06
XRN1-213ENST00000489241 CDS2O95674 445 aa2.16□□□□□ -2.06
XRN1-213ENST00000489241 IFNA16P05015 189 aa2.16□□□□□ -2.06
XRN1-213ENST00000489241 HLA-DQB2P05538 268 aa2.16□□□□□ -2.06
XRN1-213ENST00000489241 CCL1P22362 96 aa2.16□□□□□ -2.06
XRN1-213ENST00000489241 NPPCP23582 126 aa2.16□□□□□ -2.06
XRN1-213ENST00000489241 CRYBB3P26998 211 aa2.16□□□□□ -2.06
XRN1-213ENST00000489241 TAS2R45P59539 299 aa2.16□□□□□ -2.06
XRN1-213ENST00000489241 RAB5BP61020 215 aa2.16□□□□□ -2.06
XRN1-213ENST00000489241 PRDX4Q13162 271 aa2.16□□□□□ -2.06
XRN1-213ENST00000489241 OR2F1Q13607 317 aa2.16□□□□□ -2.06
XRN1-213ENST00000489241 HTR4Q13639 388 aa2.16□□□□□ -2.06
XRN1-213ENST00000489241 TMEM31Q5JXX7 168 aa2.16□□□□□ -2.06
XRN1-213ENST00000489241 RASL11AQ6T310 242 aa2.16□□□□□ -2.06
XRN1-213ENST00000489241 ZNF550Q7Z398 422 aa2.16□□□□□ -2.06
XRN1-213ENST00000489241 CALHM3Q86XJ0 350 aa2.16□□□□□ -2.06
XRN1-213ENST00000489241 LRRC34Q8IZ02 419 aa2.16□□□□□ -2.06
XRN1-213ENST00000489241 OR2D3Q8NGH3 330 aa2.16□□□□□ -2.06
XRN1-213ENST00000489241 OR10A6Q8NH74 314 aa2.16□□□□□ -2.06
XRN1-213ENST00000489241 CCDC42Q96M95 316 aa2.16□□□□□ -2.06
XRN1-213ENST00000489241 OR51I2Q9H344 312 aa2.16□□□□□ -2.06
XRN1-213ENST00000489241 SMDT1Q9H4I9 107 aa2.16□□□□□ -2.06
XRN1-213ENST00000489241 HEY1Q9Y5J3 304 aa2.16□□□□□ -2.06
XRN1-213ENST00000489241 PRR14LQ5THK1 2151 aa2.15□□□□□ -2.07
XRN1-213ENST00000489241 IGLV10-54A0A075B6I4 117 aa2.15□□□□□ -2.07
XRN1-213ENST00000489241 TGIF2-C20orf24A0A0A6YYL0 155 aa2.15□□□□□ -2.07
XRN1-213ENST00000489241 DHRS12A0PJE2 317 aa2.15□□□□□ -2.07
XRN1-213ENST00000489241 GOLGA6L19H0YKK7 550 aa2.15□□□□□ -2.07
XRN1-213ENST00000489241 SLC17A3O00476 420 aa2.15□□□□□ -2.07
XRN1-213ENST00000489241 LY6HO94772 140 aa2.15□□□□□ -2.07
XRN1-213ENST00000489241 SOD1P00441 154 aa2.15□□□□□ -2.07
XRN1-213ENST00000489241 SLC25A16P16260 332 aa2.15□□□□□ -2.07
XRN1-213ENST00000489241 MAP2K4P45985 399 aa2.15□□□□□ -2.07
XRN1-213ENST00000489241 FADDQ13158 208 aa2.15□□□□□ -2.07
XRN1-213ENST00000489241 UAP1Q16222 522 aaPredicted RBP2.15□□□□□ -2.07
XRN1-213ENST00000489241 PLPPR5Q32ZL2 321 aa2.15□□□□□ -2.07
XRN1-213ENST00000489241 KRTAP5-7Q6L8G8 165 aa2.15□□□□□ -2.07
XRN1-213ENST00000489241 HIST2H3AQ71DI3 136 aa2.15□□□□□ -2.07
XRN1-213ENST00000489241 OR2T27Q8NH04 317 aa2.15□□□□□ -2.07
XRN1-213ENST00000489241 OR4K13Q8NH42 304 aa2.15□□□□□ -2.07
XRN1-213ENST00000489241 FNDC9Q8TBE3 224 aa2.15□□□□□ -2.07
XRN1-213ENST00000489241 RNASE6Q93091 150 aaKnown RBP2.15□□□□□ -2.07
XRN1-213ENST00000489241 TMA16Q96EY4 203 aaKnown RBP2.15□□□□□ -2.07
XRN1-213ENST00000489241 DIRAS2Q96HU8 199 aa2.15□□□□□ -2.07
XRN1-213ENST00000489241 NKX6-2Q9C056 277 aaPredicted RBP2.15□□□□□ -2.07
XRN1-213ENST00000489241 SLC2A9Q9NRM0 540 aa2.15□□□□□ -2.07
XRN1-213ENST00000489241 MCTS1Q9ULC4 181 aaKnown RBP2.15□□□□□ -2.07
XRN1-213ENST00000489241 ANAPC10Q9UM13 185 aa2.15□□□□□ -2.07
XRN1-213ENST00000489241 SNX12Q9UMY4 172 aa2.15□□□□□ -2.07
XRN1-213ENST00000489241 CACNA1DQ01668 2161 aa2.15□□□□□ -2.07
XRN1-213ENST00000489241 A0A1W2PQL4 384 aaPredicted RBP2.14□□□□□ -2.07
XRN1-213ENST00000489241 OR6C6A6NF89 314 aa2.14□□□□□ -2.07
XRN1-213ENST00000489241 DISC1C4P0D8 188 aa2.14□□□□□ -2.07
XRN1-213ENST00000489241 TP53I11O14683 189 aa2.14□□□□□ -2.07
XRN1-213ENST00000489241 APOMO95445 188 aa2.14□□□□□ -2.07
XRN1-213ENST00000489241 CCL3P10147 92 aa2.14□□□□□ -2.07
XRN1-213ENST00000489241 UCHL3P15374 230 aa2.14□□□□□ -2.07
XRN1-213ENST00000489241 MARCKSL1P49006 195 aa2.14□□□□□ -2.07
XRN1-213ENST00000489241 LSM6P62312 80 aaKnown RBP2.14□□□□□ -2.07
XRN1-213ENST00000489241 CTAG1AP78358 180 aa2.14□□□□□ -2.07
XRN1-213ENST00000489241 BTN3A2P78410 334 aa2.14□□□□□ -2.07
XRN1-213ENST00000489241 MRPS15P82914 257 aaKnown RBP2.14□□□□□ -2.07
XRN1-213ENST00000489241 HIST3H3Q16695 136 aa2.14□□□□□ -2.07
XRN1-213ENST00000489241 TRAPPC5Q8IUR0 188 aa2.14□□□□□ -2.07
XRN1-213ENST00000489241 TMEM86BQ8N661 226 aa2.14□□□□□ -2.07
XRN1-213ENST00000489241 OR51D1Q8NGF3 324 aa2.14□□□□□ -2.07
XRN1-213ENST00000489241 CCL13Q99616 98 aa2.14□□□□□ -2.07
XRN1-213ENST00000489241 MGLLQ99685 303 aa2.14□□□□□ -2.07
XRN1-213ENST00000489241 OR51V1Q9H2C8 321 aa2.14□□□□□ -2.07
XRN1-213ENST00000489241 MRPL16Q9NX20 251 aaKnown RBP2.14□□□□□ -2.07
XRN1-213ENST00000489241 COQ4Q9Y3A0 265 aa2.14□□□□□ -2.07
XRN1-213ENST00000489241 LSM5Q9Y4Y9 91 aaKnown RBP2.14□□□□□ -2.07
XRN1-213ENST00000489241 ATAD5Q96QE3 1844 aa2.13□□□□□ -2.07
XRN1-213ENST00000489241 RPP14O95059 124 aaKnown RBP2.13□□□□□ -2.07
XRN1-213ENST00000489241 TNNC2P02585 160 aa2.13□□□□□ -2.07
XRN1-213ENST00000489241 TCRBP04435 133 aa2.13□□□□□ -2.07
XRN1-213ENST00000489241 CRHBPP24387 322 aa2.13□□□□□ -2.07
XRN1-213ENST00000489241 SERPINB10P48595 397 aa2.13□□□□□ -2.07
XRN1-213ENST00000489241 HOXC5Q00444 222 aa2.13□□□□□ -2.07
XRN1-213ENST00000489241 ZNF117Q03924 483 aa2.13□□□□□ -2.07
XRN1-213ENST00000489241 AESQ08117 197 aa2.13□□□□□ -2.07
XRN1-213ENST00000489241 BATFQ16520 125 aa2.13□□□□□ -2.07
XRN1-213ENST00000489241 AMTNQ6UX39 209 aa2.13□□□□□ -2.07
XRN1-213ENST00000489241 GPHB5Q86YW7 130 aa2.13□□□□□ -2.07
XRN1-213ENST00000489241 UMODL1-AS1Q8N2C9 162 aa2.13□□□□□ -2.07
XRN1-213ENST00000489241 DEFB125Q8N687 156 aa2.13□□□□□ -2.07
XRN1-213ENST00000489241 PACRGLQ8N7B6 248 aa2.13□□□□□ -2.07
XRN1-213ENST00000489241 DAND5Q8N907 189 aa2.13□□□□□ -2.07
XRN1-213ENST00000489241 GPR119Q8TDV5 335 aa2.13□□□□□ -2.07
XRN1-213ENST00000489241 GNPNAT1Q96EK6 184 aaPredicted RBP2.13□□□□□ -2.07
XRN1-213ENST00000489241 CAPZA3Q96KX2 299 aa2.13□□□□□ -2.07
XRN1-213ENST00000489241 FKBP14Q9NWM8 211 aa2.13□□□□□ -2.07
XRN1-213ENST00000489241 PXMP4Q9Y6I8 212 aa2.13□□□□□ -2.07
XRN1-213ENST00000489241 HSPE1-MOB4S4R3N1 261 aa2.13□□□□□ -2.07
XRN1-213ENST00000489241 NACADO15069 1562 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms