RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 IGKV1-6A0A0C4DH72 117 aa14.11□□□□□ -0.15
HDAC6-231ENST00000488905 CASQ2O14958 399 aaPredicted RBP14.11□□□□□ -0.15
HDAC6-231ENST00000488905 ZP3P21754 424 aa14.11□□□□□ -0.15
HDAC6-231ENST00000488905 SSBP2P81877 361 aaPredicted RBP14.11□□□□□ -0.15
HDAC6-231ENST00000488905 LIPKQ5VXJ0 399 aa14.11□□□□□ -0.15
HDAC6-231ENST00000488905 ANKRD13BQ86YJ7 626 aa14.11□□□□□ -0.15
HDAC6-231ENST00000488905 Q8N1Y9 231 aa14.11□□□□□ -0.15
HDAC6-231ENST00000488905 ARHGAP5-AS1Q96IT6 56 aa14.11□□□□□ -0.15
HDAC6-231ENST00000488905 CMSS1Q9BQ75 279 aaKnown RBP14.11□□□□□ -0.15
HDAC6-231ENST00000488905 RANGRFQ9HD47 186 aaPredicted RBP14.11□□□□□ -0.15
HDAC6-231ENST00000488905 RDH8Q9NYR8 311 aa14.11□□□□□ -0.15
HDAC6-231ENST00000488905 HYDINQ4G0P3 5121 aa14.1□□□□□ -0.15
HDAC6-231ENST00000488905 C13orf42A0A1B0GVH6 325 aa14.1□□□□□ -0.15
HDAC6-231ENST00000488905 PTGES3LE9PB15 166 aa14.1□□□□□ -0.15
HDAC6-231ENST00000488905 M0R1X1 148 aa14.1□□□□□ -0.15
HDAC6-231ENST00000488905 LDLRAD4O15165 306 aa14.1□□□□□ -0.15
HDAC6-231ENST00000488905 VEGFCP49767 419 aa14.1□□□□□ -0.15
HDAC6-231ENST00000488905 TMEM50BP56557 158 aa14.1□□□□□ -0.15
HDAC6-231ENST00000488905 RAB11BQ15907 218 aa14.1□□□□□ -0.15
HDAC6-231ENST00000488905 SGPP2Q8IWX5 399 aa14.1□□□□□ -0.15
HDAC6-231ENST00000488905 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.1□□□□□ -0.15
HDAC6-231ENST00000488905 TMEM203Q969S6 136 aa14.1□□□□□ -0.15
HDAC6-231ENST00000488905 PECRQ9BY49 303 aa14.1□□□□□ -0.15
HDAC6-231ENST00000488905 SLC35D1Q9NTN3 355 aa14.1□□□□□ -0.15
HDAC6-231ENST00000488905 A0A0G2JLM5 398 aa14.09□□□□□ -0.15
HDAC6-231ENST00000488905 A8MZ25 164 aa14.09□□□□□ -0.15
HDAC6-231ENST00000488905 IGLV2-23P01705 113 aa14.09□□□□□ -0.15
HDAC6-231ENST00000488905 MOGAT2Q3SYC2 334 aa14.09□□□□□ -0.15
HDAC6-231ENST00000488905 VCXQ9H320 206 aa14.09□□□□□ -0.15
HDAC6-231ENST00000488905 C19orf73Q9NVV2 129 aa14.09□□□□□ -0.15
HDAC6-231ENST00000488905 AK6Q9Y3D8 172 aaKnown RBP14.09□□□□□ -0.15
HDAC6-231ENST00000488905 ANKRD34BA5PLL1 514 aa14.08□□□□□ -0.16
HDAC6-231ENST00000488905 TRDCB7Z8K6 153 aa14.08□□□□□ -0.16
HDAC6-231ENST00000488905 CNIH1O95406 144 aa14.08□□□□□ -0.16
HDAC6-231ENST00000488905 RPS25P62851 125 aaKnown RBP14.08□□□□□ -0.16
HDAC6-231ENST00000488905 PJVKQ0ZLH3 352 aa14.08□□□□□ -0.16
HDAC6-231ENST00000488905 IRF3Q14653 427 aa14.08□□□□□ -0.16
HDAC6-231ENST00000488905 PLAC9Q5JTB6 97 aa14.08□□□□□ -0.16
HDAC6-231ENST00000488905 TMEM91Q6ZNR0 172 aa14.08□□□□□ -0.16
HDAC6-231ENST00000488905 OR5T1Q8NG75 326 aa14.08□□□□□ -0.16
HDAC6-231ENST00000488905 OR9G4Q8NGQ1 327 aa14.08□□□□□ -0.16
HDAC6-231ENST00000488905 ISOC1Q96CN7 298 aa14.08□□□□□ -0.16
HDAC6-231ENST00000488905 HARBI1Q96MB7 349 aa14.08□□□□□ -0.16
HDAC6-231ENST00000488905 OR2D2Q9H210 308 aa14.08□□□□□ -0.16
HDAC6-231ENST00000488905 LCE6AA0A183 80 aa14.07□□□□□ -0.16
HDAC6-231ENST00000488905 ARL6IP5O75915 188 aa14.07□□□□□ -0.16
HDAC6-231ENST00000488905 SERPINB10P48595 397 aa14.07□□□□□ -0.16
HDAC6-231ENST00000488905 CLDN12P56749 244 aa14.07□□□□□ -0.16
HDAC6-231ENST00000488905 DEFA5Q01523 94 aa14.07□□□□□ -0.16
HDAC6-231ENST00000488905 KLF5Q13887 457 aaPredicted RBP14.07□□□□□ -0.16
HDAC6-231ENST00000488905 ZFAND6Q6FIF0 208 aa14.07□□□□□ -0.16
HDAC6-231ENST00000488905 OR56B1Q8NGI3 324 aa14.07□□□□□ -0.16
HDAC6-231ENST00000488905 OR4A4PQ8NGN8 299 aa14.07□□□□□ -0.16
HDAC6-231ENST00000488905 TMEM68Q96MH6 324 aa14.07□□□□□ -0.16
HDAC6-231ENST00000488905 CABLES2Q9BTV7 478 aa14.07□□□□□ -0.16
HDAC6-231ENST00000488905 EDA2RQ9HAV5 297 aa14.07□□□□□ -0.16
HDAC6-231ENST00000488905 GAR1Q9NY12 217 aaKnown RBP14.07□□□□□ -0.16
HDAC6-231ENST00000488905 SCN3BQ9NY72 215 aa14.07□□□□□ -0.16
HDAC6-231ENST00000488905 BET1O15155 118 aa14.06□□□□□ -0.16
HDAC6-231ENST00000488905 FABP7O15540 132 aa14.06□□□□□ -0.16
HDAC6-231ENST00000488905 BRI3O95415 125 aa14.06□□□□□ -0.16
HDAC6-231ENST00000488905 CRYGBP07316 175 aa14.06□□□□□ -0.16
HDAC6-231ENST00000488905 LGALS7P47929 136 aa14.06□□□□□ -0.16
HDAC6-231ENST00000488905 SYNJ2BPP57105 145 aa14.06□□□□□ -0.16
HDAC6-231ENST00000488905 TPBGQ13641 420 aa14.06□□□□□ -0.16
HDAC6-231ENST00000488905 TRAM1Q15629 374 aa14.06□□□□□ -0.16
HDAC6-231ENST00000488905 FAM3DQ96BQ1 224 aa14.06□□□□□ -0.16
HDAC6-231ENST00000488905 TINAGL1Q9GZM7 467 aaPredicted RBP14.06□□□□□ -0.16
HDAC6-231ENST00000488905 SDHAF2Q9NX18 166 aa14.06□□□□□ -0.16
HDAC6-231ENST00000488905 BIRC6Q9NR09 4857 aa14.06□□□□□ -0.16
HDAC6-231ENST00000488905 H0Y980 276 aa14.05□□□□□ -0.16
HDAC6-231ENST00000488905 CD3GP09693 182 aa14.05□□□□□ -0.16
HDAC6-231ENST00000488905 HSMCR30P0CW71 290 aa14.05□□□□□ -0.16
HDAC6-231ENST00000488905 AADACP22760 399 aa14.05□□□□□ -0.16
HDAC6-231ENST00000488905 PSMA1P25786 263 aaKnown RBP14.05□□□□□ -0.16
HDAC6-231ENST00000488905 CALRP27797 417 aaKnown RBP14.05□□□□□ -0.16
HDAC6-231ENST00000488905 MRPS15P82914 257 aaKnown RBP14.05□□□□□ -0.16
HDAC6-231ENST00000488905 CBX3Q13185 183 aa14.05□□□□□ -0.16
HDAC6-231ENST00000488905 IL34Q6ZMJ4 242 aa14.05□□□□□ -0.16
HDAC6-231ENST00000488905 C5orf30Q96GV9 206 aa14.05□□□□□ -0.16
HDAC6-231ENST00000488905 SPATA25Q9BR10 227 aa14.05□□□□□ -0.16
HDAC6-231ENST00000488905 COA4Q9NYJ1 87 aa14.05□□□□□ -0.16
HDAC6-231ENST00000488905 SHOXO15266 292 aa14.04□□□□□ -0.16
HDAC6-231ENST00000488905 DENRO43583 198 aaKnown RBP14.04□□□□□ -0.16
HDAC6-231ENST00000488905 TRBV12-3P01733 135 aa14.04□□□□□ -0.16
HDAC6-231ENST00000488905 FCGR3AP08637 254 aa14.04□□□□□ -0.16
HDAC6-231ENST00000488905 PLA2G7Q13093 441 aa14.04□□□□□ -0.16
HDAC6-231ENST00000488905 DYRK1AQ13627 763 aa14.04□□□□□ -0.16
HDAC6-231ENST00000488905 TMEM177Q53S58 311 aa14.04□□□□□ -0.16
HDAC6-231ENST00000488905 IGSF11Q5DX21 431 aa14.04□□□□□ -0.16
HDAC6-231ENST00000488905 ZNF343Q6P1L6 599 aa14.04□□□□□ -0.16
HDAC6-231ENST00000488905 OR10J5Q8NHC4 309 aa14.04□□□□□ -0.16
HDAC6-231ENST00000488905 PEF1Q9UBV8 284 aaKnown RBP14.04□□□□□ -0.16
HDAC6-231ENST00000488905 ADAM30Q9UKF2 790 aa14.04□□□□□ -0.16
HDAC6-231ENST00000488905 KCNK7Q9Y2U2 307 aa14.04□□□□□ -0.16
HDAC6-231ENST00000488905 PLECQ15149 4684 aaKnown RBP14.04□□□□□ -0.16
HDAC6-231ENST00000488905 TRBV6-7A0A0A0MS04 114 aa14.03□□□□□ -0.16
HDAC6-231ENST00000488905 TMEM272A0A1B0GTI8 110 aa14.03□□□□□ -0.16
HDAC6-231ENST00000488905 DIRAS3O95661 229 aa14.03□□□□□ -0.16
HDAC6-231ENST00000488905 RANBP1P43487 201 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms