RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 OR2D2Q9H210 308 aa11.13□□□□□ -0.63
COL9A2-208ENST00000488463 AUNIPQ9H7T9 357 aa11.13□□□□□ -0.63
COL9A2-208ENST00000488463 ZNF221Q9UK13 617 aa11.13□□□□□ -0.63
COL9A2-208ENST00000488463 FBXO7Q9Y3I1 522 aa11.13□□□□□ -0.63
COL9A2-208ENST00000488463 TRAV18A0A075B6X5 111 aa11.12□□□□□ -0.63
COL9A2-208ENST00000488463 IGLV2-14P01704 120 aa11.12□□□□□ -0.63
COL9A2-208ENST00000488463 RPLP1P05386 114 aaKnown RBP11.12□□□□□ -0.63
COL9A2-208ENST00000488463 EGR2P11161 476 aaPredicted RBP11.12□□□□□ -0.63
COL9A2-208ENST00000488463 PTHLHP12272 177 aa11.12□□□□□ -0.63
COL9A2-208ENST00000488463 CRIP2P52943 208 aaPredicted RBP11.12□□□□□ -0.63
COL9A2-208ENST00000488463 FOXE3Q13461 319 aa11.12□□□□□ -0.63
COL9A2-208ENST00000488463 KIAA0141Q14154 515 aaPredicted RBP11.12□□□□□ -0.63
COL9A2-208ENST00000488463 LIN54Q6MZP7 749 aa11.12□□□□□ -0.63
COL9A2-208ENST00000488463 TEX38Q6PEX7 206 aa11.12□□□□□ -0.63
COL9A2-208ENST00000488463 LCNL1Q6ZST4 164 aa11.12□□□□□ -0.63
COL9A2-208ENST00000488463 MYOZ3Q8TDC0 251 aa11.12□□□□□ -0.63
COL9A2-208ENST00000488463 ACOT12Q8WYK0 555 aa11.12□□□□□ -0.63
COL9A2-208ENST00000488463 DDB2Q92466 427 aa11.12□□□□□ -0.63
COL9A2-208ENST00000488463 OR51J1Q9H342 316 aa11.12□□□□□ -0.63
COL9A2-208ENST00000488463 FBXL15Q9H469 300 aa11.12□□□□□ -0.63
COL9A2-208ENST00000488463 ANXA10Q9UJ72 324 aa11.12□□□□□ -0.63
COL9A2-208ENST00000488463 IGKV1D-13A0A0B4J2D9 117 aa11.11□□□□□ -0.63
COL9A2-208ENST00000488463 G3V318 75 aa11.11□□□□□ -0.63
COL9A2-208ENST00000488463 M0R1X1 148 aa11.11□□□□□ -0.63
COL9A2-208ENST00000488463 ATP6V0E1O15342 81 aa11.11□□□□□ -0.63
COL9A2-208ENST00000488463 TUSC2O75896 110 aa11.11□□□□□ -0.63
COL9A2-208ENST00000488463 IGLV2-23P01705 113 aa11.11□□□□□ -0.63
COL9A2-208ENST00000488463 HLA-DQB1P01920 261 aa11.11□□□□□ -0.63
COL9A2-208ENST00000488463 IGKV1-13P0DP09 117 aa11.11□□□□□ -0.63
COL9A2-208ENST00000488463 ZNF182P17025 639 aaPredicted RBP11.11□□□□□ -0.63
COL9A2-208ENST00000488463 PSMB8P28062 276 aa11.11□□□□□ -0.63
COL9A2-208ENST00000488463 GNG2P59768 71 aa11.11□□□□□ -0.63
COL9A2-208ENST00000488463 SLC35B1P78383 322 aa11.11□□□□□ -0.63
COL9A2-208ENST00000488463 SSBP2P81877 361 aaPredicted RBP11.11□□□□□ -0.63
COL9A2-208ENST00000488463 PSG5Q15238 335 aa11.11□□□□□ -0.63
COL9A2-208ENST00000488463 CNIH2Q6PI25 160 aa11.11□□□□□ -0.63
COL9A2-208ENST00000488463 GVQW1Q8N7I0 195 aa11.11□□□□□ -0.63
COL9A2-208ENST00000488463 KCTD12Q96CX2 325 aaKnown RBP11.11□□□□□ -0.63
COL9A2-208ENST00000488463 GINS4Q9BRT9 223 aa11.11□□□□□ -0.63
COL9A2-208ENST00000488463 RBM38Q9H0Z9 239 aaKnown RBP11.11□□□□□ -0.63
COL9A2-208ENST00000488463 ZFP57Q9NU63 452 aa11.11□□□□□ -0.63
COL9A2-208ENST00000488463 LINC00473A8K010 186 aa11.1□□□□□ -0.63
COL9A2-208ENST00000488463 H7C2Y5 167 aa11.1□□□□□ -0.63
COL9A2-208ENST00000488463 XRCC3O43542 346 aa11.1□□□□□ -0.63
COL9A2-208ENST00000488463 IGLV1-40P01703 118 aa11.1□□□□□ -0.63
COL9A2-208ENST00000488463 CRYGBP07316 175 aa11.1□□□□□ -0.63
COL9A2-208ENST00000488463 ELANEP08246 267 aa11.1□□□□□ -0.63
COL9A2-208ENST00000488463 CTXN2P0C2S0 81 aa11.1□□□□□ -0.63
COL9A2-208ENST00000488463 NFYAP23511 347 aaPredicted RBP11.1□□□□□ -0.63
COL9A2-208ENST00000488463 DUTP33316 252 aaKnown RBP11.1□□□□□ -0.63
COL9A2-208ENST00000488463 CX3CL1P78423 397 aa11.1□□□□□ -0.63
COL9A2-208ENST00000488463 EIF4EBP1Q13541 118 aaPredicted RBP11.1□□□□□ -0.63
COL9A2-208ENST00000488463 MRGPRG-AS1Q2M3A8 158 aa11.1□□□□□ -0.63
COL9A2-208ENST00000488463 OXLD1Q5BKU9 147 aa11.1□□□□□ -0.63
COL9A2-208ENST00000488463 HOGA1Q86XE5 327 aa11.1□□□□□ -0.63
COL9A2-208ENST00000488463 PDPNQ86YL7 162 aa11.1□□□□□ -0.63
COL9A2-208ENST00000488463 LINC00482Q8N8I6 264 aa11.1□□□□□ -0.63
COL9A2-208ENST00000488463 MINDY2Q8NBR6 621 aa11.1□□□□□ -0.63
COL9A2-208ENST00000488463 SNAPC3Q92966 411 aa11.1□□□□□ -0.63
COL9A2-208ENST00000488463 GON7Q9BXV9 100 aa11.1□□□□□ -0.63
COL9A2-208ENST00000488463 TPSG1Q9NRR2 321 aa11.1□□□□□ -0.63
COL9A2-208ENST00000488463 CCDC59Q9P031 241 aaKnown RBP11.1□□□□□ -0.63
COL9A2-208ENST00000488463 KIAA1456Q9P272 454 aa11.1□□□□□ -0.63
COL9A2-208ENST00000488463 OR2W1Q9Y3N9 320 aa11.1□□□□□ -0.63
COL9A2-208ENST00000488463 WSB1Q9Y6I7 421 aa11.1□□□□□ -0.63
COL9A2-208ENST00000488463 COL7A1Q02388 2944 aa11.1□□□□□ -0.63
COL9A2-208ENST00000488463 SRRM4A7MD48 611 aaKnown RBP11.09□□□□□ -0.63
COL9A2-208ENST00000488463 SOX15O60248 233 aa11.09□□□□□ -0.63
COL9A2-208ENST00000488463 SPDEFO95238 335 aa11.09□□□□□ -0.63
COL9A2-208ENST00000488463 PF4V1P10720 104 aa11.09□□□□□ -0.63
COL9A2-208ENST00000488463 THBS3P49746 956 aa11.09□□□□□ -0.63
COL9A2-208ENST00000488463 SPCS2Q15005 226 aa11.09□□□□□ -0.63
COL9A2-208ENST00000488463 TMEM177Q53S58 311 aa11.09□□□□□ -0.63
COL9A2-208ENST00000488463 KHDC1LQ5JSQ8 128 aa11.09□□□□□ -0.63
COL9A2-208ENST00000488463 UBE2NLQ5JXB2 153 aa11.09□□□□□ -0.63
COL9A2-208ENST00000488463 ZNF660Q6AZW8 331 aaPredicted RBP11.09□□□□□ -0.63
COL9A2-208ENST00000488463 C8orf86Q6ZUL3 223 aa11.09□□□□□ -0.63
COL9A2-208ENST00000488463 SAMD12Q8N8I0 201 aa11.09□□□□□ -0.63
COL9A2-208ENST00000488463 P2RX4Q99571 388 aa11.09□□□□□ -0.63
COL9A2-208ENST00000488463 KLK15Q9H2R5 256 aa11.09□□□□□ -0.63
COL9A2-208ENST00000488463 PARP11Q9NR21 331 aa11.09□□□□□ -0.63
COL9A2-208ENST00000488463 DIABLOQ9NR28 239 aa11.09□□□□□ -0.63
COL9A2-208ENST00000488463 SLC35D1Q9NTN3 355 aa11.09□□□□□ -0.63
COL9A2-208ENST00000488463 ADAM30Q9UKF2 790 aa11.09□□□□□ -0.63
COL9A2-208ENST00000488463 ANAPC10Q9UM13 185 aa11.09□□□□□ -0.63
COL9A2-208ENST00000488463 NUBP2Q9Y5Y2 271 aa11.09□□□□□ -0.63
COL9A2-208ENST00000488463 DNAH9Q9NYC9 4486 aa11.09□□□□□ -0.63
COL9A2-208ENST00000488463 APOA2P02652 100 aa11.08□□□□□ -0.64
COL9A2-208ENST00000488463 VDAC1P21796 283 aa11.08□□□□□ -0.64
COL9A2-208ENST00000488463 SLC6A1P30531 599 aa11.08□□□□□ -0.64
COL9A2-208ENST00000488463 S100A5P33763 92 aa11.08□□□□□ -0.64
COL9A2-208ENST00000488463 CDX1P47902 265 aaPredicted RBP11.08□□□□□ -0.64
COL9A2-208ENST00000488463 ZNF695Q8IW36 515 aa11.08□□□□□ -0.64
COL9A2-208ENST00000488463 MRPL41Q8IXM3 137 aaKnown RBP11.08□□□□□ -0.64
COL9A2-208ENST00000488463 ZNF645Q8N7E2 425 aa11.08□□□□□ -0.64
COL9A2-208ENST00000488463 BEST4Q8NFU0 473 aa11.08□□□□□ -0.64
COL9A2-208ENST00000488463 FLYWCH2Q96CP2 140 aaKnown RBP11.08□□□□□ -0.64
COL9A2-208ENST00000488463 RAX2Q96IS3 184 aa11.08□□□□□ -0.64
COL9A2-208ENST00000488463 TSNAXQ99598 290 aaKnown RBP11.08□□□□□ -0.64
COL9A2-208ENST00000488463 DCUN1D5Q9BTE7 237 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms