RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 OR8H1Q8NGG4 311 aa12.58□□□□□ -0.4
C9orf3-219ENST00000488186 TAF15Q92804 592 aaKnown RBP eCLIP12.58□□□□□ -0.4
C9orf3-219ENST00000488186 TINAGL1Q9GZM7 467 aaPredicted RBP12.58□□□□□ -0.4
C9orf3-219ENST00000488186 CCL28Q9NRJ3 127 aa12.58□□□□□ -0.4
C9orf3-219ENST00000488186 SLC35D1Q9NTN3 355 aa12.58□□□□□ -0.4
C9orf3-219ENST00000488186 RBMX2Q9Y388 322 aaKnown RBP12.58□□□□□ -0.4
C9orf3-219ENST00000488186 PRELID3BQ9Y3B1 194 aa12.58□□□□□ -0.4
C9orf3-219ENST00000488186 DISC1C4P0D8 188 aa12.57□□□□□ -0.4
C9orf3-219ENST00000488186 H0YJW9 148 aa12.57□□□□□ -0.4
C9orf3-219ENST00000488186 PROP1O75360 226 aa12.57□□□□□ -0.4
C9orf3-219ENST00000488186 PEX14O75381 377 aa12.57□□□□□ -0.4
C9orf3-219ENST00000488186 NDUFA7O95182 113 aa12.57□□□□□ -0.4
C9orf3-219ENST00000488186 AMY2AP04746 511 aa12.57□□□□□ -0.4
C9orf3-219ENST00000488186 AKAIN1P0CW23 69 aa12.57□□□□□ -0.4
C9orf3-219ENST00000488186 RRASP10301 218 aa12.57□□□□□ -0.4
C9orf3-219ENST00000488186 S100GP29377 79 aa12.57□□□□□ -0.4
C9orf3-219ENST00000488186 ETV6P41212 452 aa12.57□□□□□ -0.4
C9orf3-219ENST00000488186 AP3S2P59780 193 aa12.57□□□□□ -0.4
C9orf3-219ENST00000488186 RPS16P62249 146 aaKnown RBP12.57□□□□□ -0.4
C9orf3-219ENST00000488186 RTL8BQ17RB0 113 aa12.57□□□□□ -0.4
C9orf3-219ENST00000488186 C12orf54Q6X4T0 127 aa12.57□□□□□ -0.4
C9orf3-219ENST00000488186 Q6ZSV7 163 aa12.57□□□□□ -0.4
C9orf3-219ENST00000488186 ZNF383Q8NA42 475 aa12.57□□□□□ -0.4
C9orf3-219ENST00000488186 OR5AN1Q8NGI8 311 aa12.57□□□□□ -0.4
C9orf3-219ENST00000488186 OR2T6Q8NHC8 308 aa12.57□□□□□ -0.4
C9orf3-219ENST00000488186 MOB3AQ96BX8 217 aa12.57□□□□□ -0.4
C9orf3-219ENST00000488186 RASL11BQ9BPW5 248 aa12.57□□□□□ -0.4
C9orf3-219ENST00000488186 RANBP3Q9H6Z4 567 aaPredicted RBP12.57□□□□□ -0.4
C9orf3-219ENST00000488186 KIAA1456Q9P272 454 aa12.57□□□□□ -0.4
C9orf3-219ENST00000488186 V9GYH0 126 aa12.57□□□□□ -0.4
C9orf3-219ENST00000488186 A0A1B0GUS0 222 aa12.56□□□□□ -0.4
C9orf3-219ENST00000488186 LINC00205P59089 165 aa12.56□□□□□ -0.4
C9orf3-219ENST00000488186 MMDQ15546 238 aa12.56□□□□□ -0.4
C9orf3-219ENST00000488186 MSMO1Q15800 293 aa12.56□□□□□ -0.4
C9orf3-219ENST00000488186 SCGB2B2Q4G0G5 96 aa12.56□□□□□ -0.4
C9orf3-219ENST00000488186 ABCA11PQ4W5N1 156 aa12.56□□□□□ -0.4
C9orf3-219ENST00000488186 PDPNQ86YL7 162 aa12.56□□□□□ -0.4
C9orf3-219ENST00000488186 CMTM1Q8IZ96 169 aa12.56□□□□□ -0.4
C9orf3-219ENST00000488186 TOMM5Q8N4H5 51 aa12.56□□□□□ -0.4
C9orf3-219ENST00000488186 ARRDC1Q8N5I2 433 aa12.56□□□□□ -0.4
C9orf3-219ENST00000488186 TCTEX1D2Q8WW35 142 aa12.56□□□□□ -0.4
C9orf3-219ENST00000488186 FLYWCH2Q96CP2 140 aaKnown RBP12.56□□□□□ -0.4
C9orf3-219ENST00000488186 HSD17B10Q99714 261 aaKnown RBP12.56□□□□□ -0.4
C9orf3-219ENST00000488186 PTTG2Q9NZH5 202 aa12.56□□□□□ -0.4
C9orf3-219ENST00000488186 FGF16O43320 207 aa12.55□□□□□ -0.4
C9orf3-219ENST00000488186 TNFSF12O43508 249 aa12.55□□□□□ -0.4
C9orf3-219ENST00000488186 TSPAN9O75954 239 aa12.55□□□□□ -0.4
C9orf3-219ENST00000488186 CD74P04233 296 aa12.55□□□□□ -0.4
C9orf3-219ENST00000488186 PGAM2P15259 253 aa12.55□□□□□ -0.4
C9orf3-219ENST00000488186 DUTP33316 252 aaKnown RBP12.55□□□□□ -0.4
C9orf3-219ENST00000488186 FAUP35544 74 aaKnown RBP12.55□□□□□ -0.4
C9orf3-219ENST00000488186 F2RL1P55085 397 aa12.55□□□□□ -0.4
C9orf3-219ENST00000488186 BLCAPP62952 87 aa12.55□□□□□ -0.4
C9orf3-219ENST00000488186 RELBQ01201 579 aa12.55□□□□□ -0.4
C9orf3-219ENST00000488186 ZNF45Q02386 682 aa12.55□□□□□ -0.4
C9orf3-219ENST00000488186 CATR1Q13166 79 aa12.55□□□□□ -0.4
C9orf3-219ENST00000488186 PLGLAQ15195 96 aa12.55□□□□□ -0.4
C9orf3-219ENST00000488186 FBLN7Q53RD9 439 aa12.55□□□□□ -0.4
C9orf3-219ENST00000488186 TRIQKQ629K1 86 aa12.55□□□□□ -0.4
C9orf3-219ENST00000488186 ZNF57Q68EA5 555 aaPredicted RBP12.55□□□□□ -0.4
C9orf3-219ENST00000488186 ZNF660Q6AZW8 331 aaPredicted RBP12.55□□□□□ -0.4
C9orf3-219ENST00000488186 ZNF66Q6ZN08 573 aa12.55□□□□□ -0.4
C9orf3-219ENST00000488186 KCTD9Q7L273 389 aa12.55□□□□□ -0.4
C9orf3-219ENST00000488186 MFSD4AQ8N468 514 aa12.55□□□□□ -0.4
C9orf3-219ENST00000488186 GDPD1Q8N9F7 314 aa12.55□□□□□ -0.4
C9orf3-219ENST00000488186 BVESQ8NE79 360 aa12.55□□□□□ -0.4
C9orf3-219ENST00000488186 RNF5Q99942 180 aa12.55□□□□□ -0.4
C9orf3-219ENST00000488186 C16orf95Q9H693 158 aa12.55□□□□□ -0.4
C9orf3-219ENST00000488186 MCUBQ9NWR8 336 aa12.55□□□□□ -0.4
C9orf3-219ENST00000488186 DNHD1Q96M86 4753 aa12.54□□□□□ -0.4
C9orf3-219ENST00000488186 ANKRD20A5PA0PJZ0 165 aa12.54□□□□□ -0.4
C9orf3-219ENST00000488186 CLPSL1A2RUU4 121 aa12.54□□□□□ -0.4
C9orf3-219ENST00000488186 NBR2O15453 112 aa12.54□□□□□ -0.4
C9orf3-219ENST00000488186 FCGR3BO75015 233 aa12.54□□□□□ -0.4
C9orf3-219ENST00000488186 MDKP21741 143 aaPredicted RBP12.54□□□□□ -0.4
C9orf3-219ENST00000488186 ZNF79Q15937 498 aa12.54□□□□□ -0.4
C9orf3-219ENST00000488186 C11orf88Q6PI97 169 aa12.54□□□□□ -0.4
C9orf3-219ENST00000488186 ZNF818PQ6ZRF7 136 aa12.54□□□□□ -0.4
C9orf3-219ENST00000488186 SLC38A6Q8IZM9 456 aa12.54□□□□□ -0.4
C9orf3-219ENST00000488186 Q8N6K4 173 aa12.54□□□□□ -0.4
C9orf3-219ENST00000488186 POC5Q8NA72 575 aa12.54□□□□□ -0.4
C9orf3-219ENST00000488186 OR4D10Q8NGI6 311 aa12.54□□□□□ -0.4
C9orf3-219ENST00000488186 TERB2Q8NHR7 220 aa12.54□□□□□ -0.4
C9orf3-219ENST00000488186 RBMXL1Q96E39 390 aaKnown RBP12.54□□□□□ -0.4
C9orf3-219ENST00000488186 C5orf30Q96GV9 206 aa12.54□□□□□ -0.4
C9orf3-219ENST00000488186 TSNAXQ99598 290 aaKnown RBP12.54□□□□□ -0.4
C9orf3-219ENST00000488186 SRRQ9GZT4 340 aa12.54□□□□□ -0.4
C9orf3-219ENST00000488186 RNF114Q9Y508 228 aa12.54□□□□□ -0.4
C9orf3-219ENST00000488186 MMP24Q9Y5R2 645 aa12.54□□□□□ -0.4
C9orf3-219ENST00000488186 TENM1Q9UKZ4 2725 aa12.53□□□□□ -0.4
C9orf3-219ENST00000488186 LINC00473A8K010 186 aa12.53□□□□□ -0.4
C9orf3-219ENST00000488186 HAX1O00165 279 aa12.53□□□□□ -0.4
C9orf3-219ENST00000488186 GPR31O00270 319 aa12.53□□□□□ -0.4
C9orf3-219ENST00000488186 SHOXO15266 292 aa12.53□□□□□ -0.4
C9orf3-219ENST00000488186 IGLV2-14P01704 120 aa12.53□□□□□ -0.4
C9orf3-219ENST00000488186 GNRHRP30968 328 aa12.53□□□□□ -0.4
C9orf3-219ENST00000488186 VDAC2P45880 294 aaPredicted RBP12.53□□□□□ -0.4
C9orf3-219ENST00000488186 AWAT1Q58HT5 328 aa12.53□□□□□ -0.4
C9orf3-219ENST00000488186 OR2B11Q5JQS5 317 aa12.53□□□□□ -0.4
C9orf3-219ENST00000488186 AADACL3Q5VUY0 350 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms