RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 TSNAXQ99598 290 aaKnown RBP15.98■□□□□ 0.15
HDAC4-209ENST00000487617 SLC35D1Q9NTN3 355 aa15.98■□□□□ 0.15
HDAC4-209ENST00000487617 SDHAF2Q9NX18 166 aa15.98■□□□□ 0.15
HDAC4-209ENST00000487617 ETV7Q9Y603 341 aa15.98■□□□□ 0.15
HDAC4-209ENST00000487617 FCN1O00602 326 aa15.97■□□□□ 0.15
HDAC4-209ENST00000487617 NDPQ00604 133 aa15.97■□□□□ 0.15
HDAC4-209ENST00000487617 PSG5Q15238 335 aa15.97■□□□□ 0.15
HDAC4-209ENST00000487617 DEFB136Q30KP8 78 aa15.97■□□□□ 0.15
HDAC4-209ENST00000487617 ZNF260Q3ZCT1 412 aa15.97■□□□□ 0.15
HDAC4-209ENST00000487617 H1FOOQ8IZA3 346 aaPredicted RBP15.97■□□□□ 0.15
HDAC4-209ENST00000487617 ABHD5Q8WTS1 349 aa15.97■□□□□ 0.15
HDAC4-209ENST00000487617 FLYWCH2Q96CP2 140 aaKnown RBP15.97■□□□□ 0.15
HDAC4-209ENST00000487617 CLCC1Q96S66 551 aa15.97■□□□□ 0.15
HDAC4-209ENST00000487617 DCSTAMPQ9H295 470 aa15.97■□□□□ 0.15
HDAC4-209ENST00000487617 AURKAIP1Q9NWT8 199 aaPredicted RBP15.97■□□□□ 0.15
HDAC4-209ENST00000487617 SPDEFO95238 335 aa15.96■□□□□ 0.15
HDAC4-209ENST00000487617 RAB25P57735 213 aa15.96■□□□□ 0.15
HDAC4-209ENST00000487617 ECSCRQ19T08 205 aa15.96■□□□□ 0.15
HDAC4-209ENST00000487617 C4orf3Q8WVX3 66 aa15.96■□□□□ 0.15
HDAC4-209ENST00000487617 SLC25A38Q96DW6 304 aa15.96■□□□□ 0.15
HDAC4-209ENST00000487617 C5orf30Q96GV9 206 aa15.96■□□□□ 0.15
HDAC4-209ENST00000487617 KLK15Q9H2R5 256 aa15.96■□□□□ 0.15
HDAC4-209ENST00000487617 FBXO7Q9Y3I1 522 aa15.96■□□□□ 0.15
HDAC4-209ENST00000487617 A3GALT2U3KPV4 340 aa15.96■□□□□ 0.15
HDAC4-209ENST00000487617 AIREO43918 545 aa15.95■□□□□ 0.14
HDAC4-209ENST00000487617 CTXN2P0C2S0 81 aa15.95■□□□□ 0.14
HDAC4-209ENST00000487617 MINDY2Q8NBR6 621 aa15.95■□□□□ 0.14
HDAC4-209ENST00000487617 MRAPQ8TCY5 172 aa15.95■□□□□ 0.14
HDAC4-209ENST00000487617 MCRIP2Q9BUT9 160 aaKnown RBP15.95■□□□□ 0.14
HDAC4-209ENST00000487617 GPR61Q9BZJ8 451 aa15.95■□□□□ 0.14
HDAC4-209ENST00000487617 TRAV18A0A075B6X5 111 aa15.94■□□□□ 0.14
HDAC4-209ENST00000487617 J3QRK9 145 aa15.94■□□□□ 0.14
HDAC4-209ENST00000487617 SLC25A17O43808 307 aa15.94■□□□□ 0.14
HDAC4-209ENST00000487617 SSX5O60225 188 aa15.94■□□□□ 0.14
HDAC4-209ENST00000487617 IGLV1-40P01703 118 aa15.94■□□□□ 0.14
HDAC4-209ENST00000487617 TGFBR1P36897 503 aa15.94■□□□□ 0.14
HDAC4-209ENST00000487617 CRIP2P52943 208 aaPredicted RBP15.94■□□□□ 0.14
HDAC4-209ENST00000487617 CBX3Q13185 183 aa15.94■□□□□ 0.14
HDAC4-209ENST00000487617 MYOZ3Q8TDC0 251 aa15.94■□□□□ 0.14
HDAC4-209ENST00000487617 YIPF6Q96EC8 236 aa15.94■□□□□ 0.14
HDAC4-209ENST00000487617 FOXA2Q9Y261 457 aaPredicted RBP15.94■□□□□ 0.14
HDAC4-209ENST00000487617 A0A1W2PN81 502 aa15.93■□□□□ 0.14
HDAC4-209ENST00000487617 CA2P00918 260 aa15.93■□□□□ 0.14
HDAC4-209ENST00000487617 EGR2P11161 476 aaPredicted RBP15.93■□□□□ 0.14
HDAC4-209ENST00000487617 HOXD3P31249 432 aaPredicted RBP15.93■□□□□ 0.14
HDAC4-209ENST00000487617 CHRNA7P36544 502 aa15.93■□□□□ 0.14
HDAC4-209ENST00000487617 TAGLNQ01995 201 aaKnown RBP15.93■□□□□ 0.14
HDAC4-209ENST00000487617 TMEM267Q0VDI3 215 aaPredicted RBP15.93■□□□□ 0.14
HDAC4-209ENST00000487617 RTL8BQ17RB0 113 aa15.93■□□□□ 0.14
HDAC4-209ENST00000487617 C19orf54Q5BKX5 351 aa15.93■□□□□ 0.14
HDAC4-209ENST00000487617 CNIH2Q6PI25 160 aa15.93■□□□□ 0.14
HDAC4-209ENST00000487617 ZNF562Q6V9R5 426 aa15.93■□□□□ 0.14
HDAC4-209ENST00000487617 PPP1R27Q86WC6 154 aa15.93■□□□□ 0.14
HDAC4-209ENST00000487617 ZNF491Q8N8L2 437 aa15.93■□□□□ 0.14
HDAC4-209ENST00000487617 BVESQ8NE79 360 aa15.93■□□□□ 0.14
HDAC4-209ENST00000487617 DPF1Q92782 380 aa15.93■□□□□ 0.14
HDAC4-209ENST00000487617 UBE2E2Q96LR5 201 aa15.93■□□□□ 0.14
HDAC4-209ENST00000487617 FAM103A1Q9BTL3 118 aaKnown RBP15.93■□□□□ 0.14
HDAC4-209ENST00000487617 TPSG1Q9NRR2 321 aa15.93■□□□□ 0.14
HDAC4-209ENST00000487617 NUBP2Q9Y5Y2 271 aa15.93■□□□□ 0.14
HDAC4-209ENST00000487617 A0A0A6YYH2 397 aa15.92■□□□□ 0.14
HDAC4-209ENST00000487617 A6NJ64 397 aa15.92■□□□□ 0.14
HDAC4-209ENST00000487617 TMEM127O75204 238 aa15.92■□□□□ 0.14
HDAC4-209ENST00000487617 NFYAP23511 347 aaPredicted RBP15.92■□□□□ 0.14
HDAC4-209ENST00000487617 LGALS7P47929 136 aa15.92■□□□□ 0.14
HDAC4-209ENST00000487617 RAB9AP51151 201 aa15.92■□□□□ 0.14
HDAC4-209ENST00000487617 LUMP51884 338 aaPredicted RBP15.92■□□□□ 0.14
HDAC4-209ENST00000487617 LSM3P62310 102 aaKnown RBP15.92■□□□□ 0.14
HDAC4-209ENST00000487617 KIAA0141Q14154 515 aaPredicted RBP15.92■□□□□ 0.14
HDAC4-209ENST00000487617 TCTEX1D1Q8N7M0 179 aa15.92■□□□□ 0.14
HDAC4-209ENST00000487617 ADTRPQ96IZ2 230 aa15.92■□□□□ 0.14
HDAC4-209ENST00000487617 HARBI1Q96MB7 349 aa15.92■□□□□ 0.14
HDAC4-209ENST00000487617 GNB4Q9HAV0 340 aa15.92■□□□□ 0.14
HDAC4-209ENST00000487617 DIABLOQ9NR28 239 aa15.92■□□□□ 0.14
HDAC4-209ENST00000487617 ANXA10Q9UJ72 324 aa15.92■□□□□ 0.14
HDAC4-209ENST00000487617 SPATA2Q9UM82 520 aa15.92■□□□□ 0.14
HDAC4-209ENST00000487617 VSIG4Q9Y279 399 aa15.92■□□□□ 0.14
HDAC4-209ENST00000487617 OR2W1Q9Y3N9 320 aa15.92■□□□□ 0.14
HDAC4-209ENST00000487617 SOX15O60248 233 aa15.91■□□□□ 0.14
HDAC4-209ENST00000487617 IGLV2-23P01705 113 aa15.91■□□□□ 0.14
HDAC4-209ENST00000487617 RRASP10301 218 aa15.91■□□□□ 0.14
HDAC4-209ENST00000487617 DUTP33316 252 aaKnown RBP15.91■□□□□ 0.14
HDAC4-209ENST00000487617 UNQ5815/PRO19632Q6UWF5 114 aa15.91■□□□□ 0.14
HDAC4-209ENST00000487617 CROCCP3Q8IVE0 287 aa15.91■□□□□ 0.14
HDAC4-209ENST00000487617 ARPC1AQ92747 370 aa15.91■□□□□ 0.14
HDAC4-209ENST00000487617 OR5B12Q96R08 314 aa15.91■□□□□ 0.14
HDAC4-209ENST00000487617 SHOXO15266 292 aa15.9■□□□□ 0.14
HDAC4-209ENST00000487617 RPS19P39019 145 aaKnown RBP15.9■□□□□ 0.14
HDAC4-209ENST00000487617 KRTAP10-11P60412 298 aa15.9■□□□□ 0.14
HDAC4-209ENST00000487617 FXYD3Q14802 87 aa15.9■□□□□ 0.14
HDAC4-209ENST00000487617 AKIRIN2Q53H80 203 aa15.9■□□□□ 0.14
HDAC4-209ENST00000487617 TMEM177Q53S58 311 aa15.9■□□□□ 0.14
HDAC4-209ENST00000487617 ACTBL2Q562R1 376 aa15.9■□□□□ 0.14
HDAC4-209ENST00000487617 ZNF645Q8N7E2 425 aa15.9■□□□□ 0.14
HDAC4-209ENST00000487617 LFNGQ8NES3 379 aa15.9■□□□□ 0.14
HDAC4-209ENST00000487617 OR11H1Q8NG94 326 aa15.9■□□□□ 0.14
HDAC4-209ENST00000487617 OR5M8Q8NGP6 311 aa15.9■□□□□ 0.14
HDAC4-209ENST00000487617 GRPEL2Q8TAA5 225 aa15.9■□□□□ 0.14
HDAC4-209ENST00000487617 CASTOR1Q8WTX7 329 aa15.9■□□□□ 0.14
HDAC4-209ENST00000487617 CNIH1O95406 144 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms