RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 MLLT11Q13015 90 aaPredicted RBP1.99□□□□□ -2.09
SMC4-218ENST00000486711 PPP1R1AQ13522 171 aa1.99□□□□□ -2.09
SMC4-218ENST00000486711 IQCF2Q8IXL9 164 aa1.99□□□□□ -2.09
SMC4-218ENST00000486711 C1orf174Q8IYL3 243 aa1.99□□□□□ -2.09
SMC4-218ENST00000486711 OR11H2Q8NH07 326 aa1.99□□□□□ -2.09
SMC4-218ENST00000486711 DNAJC30Q96LL9 226 aa1.99□□□□□ -2.09
SMC4-218ENST00000486711 MAP1LC3AQ9H492 121 aa1.99□□□□□ -2.09
SMC4-218ENST00000486711 POLR1DQ9Y2S0 133 aa1.99□□□□□ -2.09
SMC4-218ENST00000486711 SHANK3Q9BYB0 1731 aa1.99□□□□□ -2.09
SMC4-218ENST00000486711 FBN1P35555 2871 aaKnown RBP1.99□□□□□ -2.09
SMC4-218ENST00000486711 A0A1W2PQL4 384 aaPredicted RBP1.98□□□□□ -2.09
SMC4-218ENST00000486711 LRRN3E7EW58 273 aa1.98□□□□□ -2.09
SMC4-218ENST00000486711 H0Y980 276 aa1.98□□□□□ -2.09
SMC4-218ENST00000486711 IGHV1-69P01742 117 aa1.98□□□□□ -2.09
SMC4-218ENST00000486711 HLA-DQB2P05538 268 aa1.98□□□□□ -2.09
SMC4-218ENST00000486711 IL3P08700 152 aa1.98□□□□□ -2.09
SMC4-218ENST00000486711 CCL3P10147 92 aa1.98□□□□□ -2.09
SMC4-218ENST00000486711 SERPINB10P48595 397 aa1.98□□□□□ -2.09
SMC4-218ENST00000486711 JOSD1Q15040 202 aaPredicted RBP1.98□□□□□ -2.09
SMC4-218ENST00000486711 GLT6D1Q7Z4J2 308 aa1.98□□□□□ -2.09
SMC4-218ENST00000486711 TMEM156Q8N614 296 aa1.98□□□□□ -2.09
SMC4-218ENST00000486711 JOSD2Q8TAC2 188 aa1.98□□□□□ -2.09
SMC4-218ENST00000486711 EEF1AKMT1Q8WVE0 214 aa1.98□□□□□ -2.09
SMC4-218ENST00000486711 MRPS24Q96EL2 167 aaKnown RBP1.98□□□□□ -2.09
SMC4-218ENST00000486711 DKKL1Q9UK85 242 aa1.98□□□□□ -2.09
SMC4-218ENST00000486711 POLR3HQ9Y535 204 aaPredicted RBP1.98□□□□□ -2.09
SMC4-218ENST00000486711 ATAD5Q96QE3 1844 aa1.98□□□□□ -2.09
SMC4-218ENST00000486711 ABCC11Q96J66 1382 aa1.98□□□□□ -2.09
SMC4-218ENST00000486711 OR5K4A6NMS3 321 aa1.97□□□□□ -2.09
SMC4-218ENST00000486711 ZNF189O75820 626 aaPredicted RBP1.97□□□□□ -2.09
SMC4-218ENST00000486711 NDUFB2O95178 105 aa1.97□□□□□ -2.09
SMC4-218ENST00000486711 KRT7P08729 469 aa1.97□□□□□ -2.09
SMC4-218ENST00000486711 P0DMU3 169 aa1.97□□□□□ -2.09
SMC4-218ENST00000486711 FAM231AP0DMU4 169 aa1.97□□□□□ -2.09
SMC4-218ENST00000486711 FAM231CP0DMU5 169 aa1.97□□□□□ -2.09
SMC4-218ENST00000486711 CTBP2P56545 445 aa1.97□□□□□ -2.09
SMC4-218ENST00000486711 TAS2R30P59541 319 aa1.97□□□□□ -2.09
SMC4-218ENST00000486711 KRTAP12-3P60328 96 aa1.97□□□□□ -2.09
SMC4-218ENST00000486711 KRTAP12-4P60329 112 aa1.97□□□□□ -2.09
SMC4-218ENST00000486711 UAP1Q16222 522 aaPredicted RBP1.97□□□□□ -2.09
SMC4-218ENST00000486711 KRTAP6-3Q3LI67 103 aa1.97□□□□□ -2.09
SMC4-218ENST00000486711 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.97□□□□□ -2.09
SMC4-218ENST00000486711 LRRN1Q6UXK5 716 aa1.97□□□□□ -2.09
SMC4-218ENST00000486711 C2orf91Q6ZV80 131 aa1.97□□□□□ -2.09
SMC4-218ENST00000486711 COMMD7Q86VX2 200 aa1.97□□□□□ -2.09
SMC4-218ENST00000486711 UBL4BQ8N7F7 174 aa1.97□□□□□ -2.09
SMC4-218ENST00000486711 DAND5Q8N907 189 aa1.97□□□□□ -2.09
SMC4-218ENST00000486711 CNEP1R1Q8N9A8 125 aa1.97□□□□□ -2.09
SMC4-218ENST00000486711 OR4X1Q8NH49 305 aa1.97□□□□□ -2.09
SMC4-218ENST00000486711 RPS4Y2Q8TD47 263 aa1.97□□□□□ -2.09
SMC4-218ENST00000486711 FGF13Q92913 245 aa1.97□□□□□ -2.09
SMC4-218ENST00000486711 SLC35G5Q96KT7 338 aa1.97□□□□□ -2.09
SMC4-218ENST00000486711 TMEM106BQ9NUM4 274 aa1.97□□□□□ -2.09
SMC4-218ENST00000486711 FKBP14Q9NWM8 211 aa1.97□□□□□ -2.09
SMC4-218ENST00000486711 NDUFB11Q9NX14 153 aa1.97□□□□□ -2.09
SMC4-218ENST00000486711 BABAM2Q9NXR7 383 aa1.97□□□□□ -2.09
SMC4-218ENST00000486711 CHD2O14647 1828 aaKnown RBP1.96□□□□□ -2.1
SMC4-218ENST00000486711 ADAMTSL1Q8N6G6 1762 aa1.96□□□□□ -2.1
SMC4-218ENST00000486711 LCTP09848 1927 aa1.96□□□□□ -2.1
SMC4-218ENST00000486711 MUC21A0A0G2JKD1 596 aa1.96□□□□□ -2.1
SMC4-218ENST00000486711 MUC21A0A140T8X8 626 aa1.96□□□□□ -2.1
SMC4-218ENST00000486711 OR6C6A6NF89 314 aa1.96□□□□□ -2.1
SMC4-218ENST00000486711 HLA-DRAP01903 254 aa1.96□□□□□ -2.1
SMC4-218ENST00000486711 HINT1P49773 126 aaPredicted RBP1.96□□□□□ -2.1
SMC4-218ENST00000486711 PLPPR5Q32ZL2 321 aa1.96□□□□□ -2.1
SMC4-218ENST00000486711 FAM78BQ5VT40 261 aa1.96□□□□□ -2.1
SMC4-218ENST00000486711 LGALS9CQ6DKI2 356 aa1.96□□□□□ -2.1
SMC4-218ENST00000486711 RASSF6Q6ZTQ3 369 aa1.96□□□□□ -2.1
SMC4-218ENST00000486711 HIST2H3AQ71DI3 136 aa1.96□□□□□ -2.1
SMC4-218ENST00000486711 SLC35F6Q8N357 371 aa1.96□□□□□ -2.1
SMC4-218ENST00000486711 TESCQ96BS2 214 aa1.96□□□□□ -2.1
SMC4-218ENST00000486711 TMA16Q96EY4 203 aaKnown RBP1.96□□□□□ -2.1
SMC4-218ENST00000486711 ARL5BQ96KC2 179 aa1.96□□□□□ -2.1
SMC4-218ENST00000486711 TXNDC17Q9BRA2 123 aa1.96□□□□□ -2.1
SMC4-218ENST00000486711 PECRQ9BY49 303 aa1.96□□□□□ -2.1
SMC4-218ENST00000486711 TMEM222Q9H0R3 208 aa1.96□□□□□ -2.1
SMC4-218ENST00000486711 NOSIPQ9Y314 301 aaKnown RBP1.96□□□□□ -2.1
SMC4-218ENST00000486711 IGHV3-15A0A0B4J1V0 119 aa1.95□□□□□ -2.1
SMC4-218ENST00000486711 C11orf86A6NJI1 115 aa1.95□□□□□ -2.1
SMC4-218ENST00000486711 CXCR6O00574 342 aa1.95□□□□□ -2.1
SMC4-218ENST00000486711 TXNDC9O14530 226 aa1.95□□□□□ -2.1
SMC4-218ENST00000486711 GNRH2O43555 120 aa1.95□□□□□ -2.1
SMC4-218ENST00000486711 UCHL1P09936 223 aa1.95□□□□□ -2.1
SMC4-218ENST00000486711 MYL12AP19105 171 aa1.95□□□□□ -2.1
SMC4-218ENST00000486711 ALOX5APP20292 161 aa1.95□□□□□ -2.1
SMC4-218ENST00000486711 RPL12P30050 165 aaKnown RBP1.95□□□□□ -2.1
SMC4-218ENST00000486711 RPL27AP46776 148 aaKnown RBP1.95□□□□□ -2.1
SMC4-218ENST00000486711 GABRA2P47869 451 aa1.95□□□□□ -2.1
SMC4-218ENST00000486711 XCL1P47992 114 aa1.95□□□□□ -2.1
SMC4-218ENST00000486711 ZNF140P52738 457 aaPredicted RBP1.95□□□□□ -2.1
SMC4-218ENST00000486711 MAGOHP61326 146 aaKnown RBP1.95□□□□□ -2.1
SMC4-218ENST00000486711 TBPL1P62380 186 aa1.95□□□□□ -2.1
SMC4-218ENST00000486711 BATFQ16520 125 aa1.95□□□□□ -2.1
SMC4-218ENST00000486711 AGTRAPQ6RW13 159 aa1.95□□□□□ -2.1
SMC4-218ENST00000486711 TMEM161BQ8NDZ6 487 aa1.95□□□□□ -2.1
SMC4-218ENST00000486711 HAVCR2Q8TDQ0 301 aa1.95□□□□□ -2.1
SMC4-218ENST00000486711 SAMHD1Q9Y3Z3 626 aaKnown RBP1.95□□□□□ -2.1
SMC4-218ENST00000486711 ZNF638Q14966 1978 aaKnown RBP1.95□□□□□ -2.1
SMC4-218ENST00000486711 PLCH2O75038 1416 aa1.94□□□□□ -2.1
SMC4-218ENST00000486711 TMED7-TICAM2A0A0A6YYA0 188 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms