RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 METTL1Q9UBP6 276 aaKnown RBP14.34□□□□□ -0.11
PRPF40A-209ENST00000486100 ZMAT5Q9UDW3 170 aaKnown RBP14.34□□□□□ -0.11
PRPF40A-209ENST00000486100 FBXO7Q9Y3I1 522 aa14.34□□□□□ -0.11
PRPF40A-209ENST00000486100 WI2-2373I1.2A0A1W2PRP0 233 aa14.33□□□□□ -0.12
PRPF40A-209ENST00000486100 I3L521 148 aa14.33□□□□□ -0.12
PRPF40A-209ENST00000486100 SPDEFO95238 335 aa14.33□□□□□ -0.12
PRPF40A-209ENST00000486100 EGR2P11161 476 aaPredicted RBP14.33□□□□□ -0.12
PRPF40A-209ENST00000486100 RUNX1Q01196 453 aa14.33□□□□□ -0.12
PRPF40A-209ENST00000486100 FHL3Q13643 280 aa14.33□□□□□ -0.12
PRPF40A-209ENST00000486100 ECSCRQ19T08 205 aa14.33□□□□□ -0.12
PRPF40A-209ENST00000486100 TCTEX1D1Q8N7M0 179 aa14.33□□□□□ -0.12
PRPF40A-209ENST00000486100 OR11H1Q8NG94 326 aa14.33□□□□□ -0.12
PRPF40A-209ENST00000486100 CLCC1Q96S66 551 aa14.33□□□□□ -0.12
PRPF40A-209ENST00000486100 OR2D2Q9H210 308 aa14.33□□□□□ -0.12
PRPF40A-209ENST00000486100 GNB4Q9HAV0 340 aa14.33□□□□□ -0.12
PRPF40A-209ENST00000486100 SDHAF2Q9NX18 166 aa14.33□□□□□ -0.12
PRPF40A-209ENST00000486100 DAPK2Q9UIK4 370 aa14.33□□□□□ -0.12
PRPF40A-209ENST00000486100 ELF5Q9UKW6 265 aaPredicted RBP14.33□□□□□ -0.12
PRPF40A-209ENST00000486100 DTYMKP23919 212 aa14.32□□□□□ -0.12
PRPF40A-209ENST00000486100 DEFB121Q5J5C9 76 aa14.32□□□□□ -0.12
PRPF40A-209ENST00000486100 SFXN4Q6P4A7 337 aa14.32□□□□□ -0.12
PRPF40A-209ENST00000486100 GINS4Q9BRT9 223 aa14.32□□□□□ -0.12
PRPF40A-209ENST00000486100 SLC35D1Q9NTN3 355 aa14.32□□□□□ -0.12
PRPF40A-209ENST00000486100 FOXA2Q9Y261 457 aaPredicted RBP14.32□□□□□ -0.12
PRPF40A-209ENST00000486100 RBM7Q9Y580 266 aaKnown RBP14.32□□□□□ -0.12
PRPF40A-209ENST00000486100 IGKV1D-8A0A087WSZ0 117 aa14.31□□□□□ -0.12
PRPF40A-209ENST00000486100 A0A1W2PN81 502 aa14.31□□□□□ -0.12
PRPF40A-209ENST00000486100 SOX15O60248 233 aa14.31□□□□□ -0.12
PRPF40A-209ENST00000486100 SCGNO76038 276 aa14.31□□□□□ -0.12
PRPF40A-209ENST00000486100 SNRPBP14678 240 aaKnown RBP14.31□□□□□ -0.12
PRPF40A-209ENST00000486100 SDC2P34741 201 aa14.31□□□□□ -0.12
PRPF40A-209ENST00000486100 CHRNA7P36544 502 aa14.31□□□□□ -0.12
PRPF40A-209ENST00000486100 LGALS7P47929 136 aa14.31□□□□□ -0.12
PRPF40A-209ENST00000486100 TAGLNQ01995 201 aaKnown RBP14.31□□□□□ -0.12
PRPF40A-209ENST00000486100 AKIRIN2Q53H80 203 aa14.31□□□□□ -0.12
PRPF40A-209ENST00000486100 HACD4Q5VWC8 232 aa14.31□□□□□ -0.12
PRPF40A-209ENST00000486100 PPP1R27Q86WC6 154 aa14.31□□□□□ -0.12
PRPF40A-209ENST00000486100 OR1N2Q8NGR9 330 aa14.31□□□□□ -0.12
PRPF40A-209ENST00000486100 ABHD5Q8WTS1 349 aa14.31□□□□□ -0.12
PRPF40A-209ENST00000486100 DCSTAMPQ9H295 470 aa14.31□□□□□ -0.12
PRPF40A-209ENST00000486100 A3GALT2U3KPV4 340 aa14.31□□□□□ -0.12
PRPF40A-209ENST00000486100 CA2P00918 260 aa14.3□□□□□ -0.12
PRPF40A-209ENST00000486100 DGCR2P98153 550 aa14.3□□□□□ -0.12
PRPF40A-209ENST00000486100 PITPNAQ00169 270 aa14.3□□□□□ -0.12
PRPF40A-209ENST00000486100 KCTD21Q4G0X4 260 aa14.3□□□□□ -0.12
PRPF40A-209ENST00000486100 C9orf66Q5T8R8 295 aa14.3□□□□□ -0.12
PRPF40A-209ENST00000486100 H1FOOQ8IZA3 346 aaPredicted RBP14.3□□□□□ -0.12
PRPF40A-209ENST00000486100 OR5B12Q96R08 314 aa14.3□□□□□ -0.12
PRPF40A-209ENST00000486100 FAM103A1Q9BTL3 118 aaKnown RBP14.3□□□□□ -0.12
PRPF40A-209ENST00000486100 ST6GALNAC5Q9BVH7 336 aa14.3□□□□□ -0.12
PRPF40A-209ENST00000486100 SLC25A17O43808 307 aa14.29□□□□□ -0.12
PRPF40A-209ENST00000486100 RAMP3O60896 148 aa14.29□□□□□ -0.12
PRPF40A-209ENST00000486100 CTXN2P0C2S0 81 aa14.29□□□□□ -0.12
PRPF40A-209ENST00000486100 CLEC2LP0C7M8 214 aa14.29□□□□□ -0.12
PRPF40A-209ENST00000486100 OR8U8P0C7N1 319 aa14.29□□□□□ -0.12
PRPF40A-209ENST00000486100 CD36P16671 472 aa14.29□□□□□ -0.12
PRPF40A-209ENST00000486100 MXD1Q05195 221 aa14.29□□□□□ -0.12
PRPF40A-209ENST00000486100 ZNF616Q08AN1 781 aa14.29□□□□□ -0.12
PRPF40A-209ENST00000486100 NEDD8Q15843 81 aa14.29□□□□□ -0.12
PRPF40A-209ENST00000486100 ZNF260Q3ZCT1 412 aa14.29□□□□□ -0.12
PRPF40A-209ENST00000486100 ACTBL2Q562R1 376 aa14.29□□□□□ -0.12
PRPF40A-209ENST00000486100 PYHIN1Q6K0P9 492 aa14.29□□□□□ -0.12
PRPF40A-209ENST00000486100 UNQ5815/PRO19632Q6UWF5 114 aa14.29□□□□□ -0.12
PRPF40A-209ENST00000486100 LFNGQ8NES3 379 aa14.29□□□□□ -0.12
PRPF40A-209ENST00000486100 LGALS14Q8TCE9 139 aa14.29□□□□□ -0.12
PRPF40A-209ENST00000486100 C5orf30Q96GV9 206 aa14.29□□□□□ -0.12
PRPF40A-209ENST00000486100 RNF167Q9H6Y7 350 aa14.29□□□□□ -0.12
PRPF40A-209ENST00000486100 LOC100506127A0A0U1RQW1 187 aa14.28□□□□□ -0.12
PRPF40A-209ENST00000486100 IGLV2-23P01705 113 aa14.28□□□□□ -0.12
PRPF40A-209ENST00000486100 CRYGBP07316 175 aa14.28□□□□□ -0.12
PRPF40A-209ENST00000486100 RRASP10301 218 aa14.28□□□□□ -0.12
PRPF40A-209ENST00000486100 LUMP51884 338 aaPredicted RBP14.28□□□□□ -0.12
PRPF40A-209ENST00000486100 SCAND1P57086 179 aa14.28□□□□□ -0.12
PRPF40A-209ENST00000486100 GNB1P62873 340 aa14.28□□□□□ -0.12
PRPF40A-209ENST00000486100 FXYD3Q14802 87 aa14.28□□□□□ -0.12
PRPF40A-209ENST00000486100 TMEM177Q53S58 311 aa14.28□□□□□ -0.12
PRPF40A-209ENST00000486100 BVESQ8NE79 360 aa14.28□□□□□ -0.12
PRPF40A-209ENST00000486100 ADTRPQ96IZ2 230 aa14.28□□□□□ -0.12
PRPF40A-209ENST00000486100 TPSG1Q9NRR2 321 aa14.28□□□□□ -0.12
PRPF40A-209ENST00000486100 TMEM235A6NFC5 223 aa14.27□□□□□ -0.13
PRPF40A-209ENST00000486100 SEC14L6B5MCN3 397 aa14.27□□□□□ -0.13
PRPF40A-209ENST00000486100 ARPC1BO15143 372 aaKnown RBP14.27□□□□□ -0.13
PRPF40A-209ENST00000486100 CD40LGP29965 261 aa14.27□□□□□ -0.13
PRPF40A-209ENST00000486100 DUTP33316 252 aaKnown RBP14.27□□□□□ -0.13
PRPF40A-209ENST00000486100 CBX3Q13185 183 aa14.27□□□□□ -0.13
PRPF40A-209ENST00000486100 RTL8BQ17RB0 113 aa14.27□□□□□ -0.13
PRPF40A-209ENST00000486100 ASPHD1Q5U4P2 390 aa14.27□□□□□ -0.13
PRPF40A-209ENST00000486100 CASTOR1Q8WTX7 329 aa14.27□□□□□ -0.13
PRPF40A-209ENST00000486100 NUDCD2Q8WVJ2 157 aa14.27□□□□□ -0.13
PRPF40A-209ENST00000486100 ARPC1AQ92747 370 aa14.27□□□□□ -0.13
PRPF40A-209ENST00000486100 HARBI1Q96MB7 349 aa14.27□□□□□ -0.13
PRPF40A-209ENST00000486100 RHBDL2Q9NX52 303 aa14.27□□□□□ -0.13
PRPF40A-209ENST00000486100 SCOCQ9UIL1 159 aa14.27□□□□□ -0.13
PRPF40A-209ENST00000486100 SRRM4A7MD48 611 aaKnown RBP14.26□□□□□ -0.13
PRPF40A-209ENST00000486100 SHOXO15266 292 aa14.26□□□□□ -0.13
PRPF40A-209ENST00000486100 GNG2P59768 71 aa14.26□□□□□ -0.13
PRPF40A-209ENST00000486100 IDNKQ5T6J7 187 aa14.26□□□□□ -0.13
PRPF40A-209ENST00000486100 CNIH2Q6PI25 160 aa14.26□□□□□ -0.13
PRPF40A-209ENST00000486100 OR5H6Q8NGV6 325 aa14.26□□□□□ -0.13
PRPF40A-209ENST00000486100 DDB2Q92466 427 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms