RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 RDH8Q9NYR8 311 aa5.48□□□□□ -1.53
VPS50-218ENST00000485994 OR1A1Q9P1Q5 309 aa5.48□□□□□ -1.53
VPS50-218ENST00000485994 KIAA1456Q9P272 454 aa5.48□□□□□ -1.53
VPS50-218ENST00000485994 LINC00527Q9UJ94 153 aa5.48□□□□□ -1.53
VPS50-218ENST00000485994 WASHC3Q9Y3C0 194 aa5.48□□□□□ -1.53
VPS50-218ENST00000485994 A0A087WXM4 84 aa5.47□□□□□ -1.53
VPS50-218ENST00000485994 A0A1W2PRX2 142 aa5.47□□□□□ -1.53
VPS50-218ENST00000485994 I3L521 148 aa5.47□□□□□ -1.53
VPS50-218ENST00000485994 SPDEFO95238 335 aa5.47□□□□□ -1.53
VPS50-218ENST00000485994 BRI3O95415 125 aa5.47□□□□□ -1.53
VPS50-218ENST00000485994 RPLP1P05386 114 aaKnown RBP5.47□□□□□ -1.53
VPS50-218ENST00000485994 TFAP2AP05549 437 aa5.47□□□□□ -1.53
VPS50-218ENST00000485994 SMIM18P0DKX4 95 aa5.47□□□□□ -1.53
VPS50-218ENST00000485994 RRASP10301 218 aa5.47□□□□□ -1.53
VPS50-218ENST00000485994 EGR2P11161 476 aaPredicted RBP5.47□□□□□ -1.53
VPS50-218ENST00000485994 SLC2A2P11168 524 aaPredicted RBP5.47□□□□□ -1.53
VPS50-218ENST00000485994 IGLL1P15814 213 aa5.47□□□□□ -1.53
VPS50-218ENST00000485994 GNB3P16520 340 aa5.47□□□□□ -1.53
VPS50-218ENST00000485994 CNTFRP26992 372 aa5.47□□□□□ -1.53
VPS50-218ENST00000485994 SDC2P34741 201 aa5.47□□□□□ -1.53
VPS50-218ENST00000485994 TALDO1P37837 337 aa5.47□□□□□ -1.53
VPS50-218ENST00000485994 RAB9AP51151 201 aa5.47□□□□□ -1.53
VPS50-218ENST00000485994 CX3CL1P78423 397 aa5.47□□□□□ -1.53
VPS50-218ENST00000485994 TIMM50Q3ZCQ8 353 aa5.47□□□□□ -1.53
VPS50-218ENST00000485994 IGSF11Q5DX21 431 aa5.47□□□□□ -1.53
VPS50-218ENST00000485994 FOXB2Q5VYV0 432 aa5.47□□□□□ -1.53
VPS50-218ENST00000485994 SFXN4Q6P4A7 337 aa5.47□□□□□ -1.53
VPS50-218ENST00000485994 C1QL4Q86Z23 238 aa5.47□□□□□ -1.53
VPS50-218ENST00000485994 ZNF491Q8N8L2 437 aa5.47□□□□□ -1.53
VPS50-218ENST00000485994 ZNF383Q8NA42 475 aa5.47□□□□□ -1.53
VPS50-218ENST00000485994 OR8U1Q8NH10 309 aa5.47□□□□□ -1.53
VPS50-218ENST00000485994 SETD6Q8TBK2 473 aa5.47□□□□□ -1.53
VPS50-218ENST00000485994 C4orf3Q8WVX3 66 aa5.47□□□□□ -1.53
VPS50-218ENST00000485994 FLYWCH2Q96CP2 140 aaKnown RBP5.47□□□□□ -1.53
VPS50-218ENST00000485994 TSNAXQ99598 290 aaKnown RBP5.47□□□□□ -1.53
VPS50-218ENST00000485994 PARP12Q9H0J9 701 aaKnown RBP5.47□□□□□ -1.53
VPS50-218ENST00000485994 ATG5Q9H1Y0 275 aa5.47□□□□□ -1.53
VPS50-218ENST00000485994 OR51E2Q9H255 320 aa5.47□□□□□ -1.53
VPS50-218ENST00000485994 RNF150Q9ULK6 438 aa5.47□□□□□ -1.53
VPS50-218ENST00000485994 SPATA2Q9UM82 520 aa5.47□□□□□ -1.53
VPS50-218ENST00000485994 TRAV41A0A0B4J266 112 aa5.46□□□□□ -1.54
VPS50-218ENST00000485994 CCL24O00175 119 aa5.46□□□□□ -1.54
VPS50-218ENST00000485994 ARPC1BO15143 372 aaKnown RBP5.46□□□□□ -1.54
VPS50-218ENST00000485994 BET1O15155 118 aa5.46□□□□□ -1.54
VPS50-218ENST00000485994 TNFAIP8O95379 198 aa5.46□□□□□ -1.54
VPS50-218ENST00000485994 HLA-DQB1P01920 261 aa5.46□□□□□ -1.54
VPS50-218ENST00000485994 CRYGBP07316 175 aa5.46□□□□□ -1.54
VPS50-218ENST00000485994 OR8U9P0C7N5 309 aa5.46□□□□□ -1.54
VPS50-218ENST00000485994 CD36P16671 472 aa5.46□□□□□ -1.54
VPS50-218ENST00000485994 RPS16P62249 146 aaKnown RBP5.46□□□□□ -1.54
VPS50-218ENST00000485994 FHL3Q13643 280 aa5.46□□□□□ -1.54
VPS50-218ENST00000485994 ARFRP1Q13795 201 aa5.46□□□□□ -1.54
VPS50-218ENST00000485994 PSG5Q15238 335 aa5.46□□□□□ -1.54
VPS50-218ENST00000485994 TMEM177Q53S58 311 aa5.46□□□□□ -1.54
VPS50-218ENST00000485994 PYHIN1Q6K0P9 492 aa5.46□□□□□ -1.54
VPS50-218ENST00000485994 CNIH2Q6PI25 160 aa5.46□□□□□ -1.54
VPS50-218ENST00000485994 TMEM65Q6PI78 240 aa5.46□□□□□ -1.54
VPS50-218ENST00000485994 FAM131AQ6UXB0 335 aa5.46□□□□□ -1.54
VPS50-218ENST00000485994 H1FOOQ8IZA3 346 aaPredicted RBP5.46□□□□□ -1.54
VPS50-218ENST00000485994 KLHL30-AS1Q8NEE0 82 aa5.46□□□□□ -1.54
VPS50-218ENST00000485994 TSPAN14Q8NG11 270 aa5.46□□□□□ -1.54
VPS50-218ENST00000485994 RAX2Q96IS3 184 aa5.46□□□□□ -1.54
VPS50-218ENST00000485994 ADTRPQ96IZ2 230 aa5.46□□□□□ -1.54
VPS50-218ENST00000485994 FBXL15Q9H469 300 aa5.46□□□□□ -1.54
VPS50-218ENST00000485994 SDHAF2Q9NX18 166 aa5.46□□□□□ -1.54
VPS50-218ENST00000485994 DAPK2Q9UIK4 370 aa5.46□□□□□ -1.54
VPS50-218ENST00000485994 VSIG4Q9Y279 399 aa5.46□□□□□ -1.54
VPS50-218ENST00000485994 ETV7Q9Y603 341 aa5.46□□□□□ -1.54
VPS50-218ENST00000485994 A0A0B4J203 849 aa5.45□□□□□ -1.54
VPS50-218ENST00000485994 G3V318 75 aa5.45□□□□□ -1.54
VPS50-218ENST00000485994 H3BUA1 57 aa5.45□□□□□ -1.54
VPS50-218ENST00000485994 H7C2Y5 167 aa5.45□□□□□ -1.54
VPS50-218ENST00000485994 FCN1O00602 326 aa5.45□□□□□ -1.54
VPS50-218ENST00000485994 ATP6V0E1O15342 81 aa5.45□□□□□ -1.54
VPS50-218ENST00000485994 RAMP3O60896 148 aa5.45□□□□□ -1.54
VPS50-218ENST00000485994 TUSC2O75896 110 aa5.45□□□□□ -1.54
VPS50-218ENST00000485994 IGLV2-23P01705 113 aa5.45□□□□□ -1.54
VPS50-218ENST00000485994 APOA2P02652 100 aa5.45□□□□□ -1.54
VPS50-218ENST00000485994 IGKV1-16P04430 117 aa5.45□□□□□ -1.54
VPS50-218ENST00000485994 DUTP33316 252 aaKnown RBP5.45□□□□□ -1.54
VPS50-218ENST00000485994 INSL3P51460 131 aa5.45□□□□□ -1.54
VPS50-218ENST00000485994 MSMO1Q15800 293 aa5.45□□□□□ -1.54
VPS50-218ENST00000485994 GLDNQ6ZMI3 551 aaPredicted RBP5.45□□□□□ -1.54
VPS50-218ENST00000485994 LCNL1Q6ZST4 164 aa5.45□□□□□ -1.54
VPS50-218ENST00000485994 C18orf65Q6ZTR6 163 aa5.45□□□□□ -1.54
VPS50-218ENST00000485994 PPP1R27Q86WC6 154 aa5.45□□□□□ -1.54
VPS50-218ENST00000485994 TEX45Q8NA69 505 aa5.45□□□□□ -1.54
VPS50-218ENST00000485994 OR5M8Q8NGP6 311 aa5.45□□□□□ -1.54
VPS50-218ENST00000485994 DDB2Q92466 427 aa5.45□□□□□ -1.54
VPS50-218ENST00000485994 YIPF6Q96EC8 236 aa5.45□□□□□ -1.54
VPS50-218ENST00000485994 CMTM3Q96MX0 182 aa5.45□□□□□ -1.54
VPS50-218ENST00000485994 GINS4Q9BRT9 223 aa5.45□□□□□ -1.54
VPS50-218ENST00000485994 SLA2Q9H6Q3 261 aa5.45□□□□□ -1.54
VPS50-218ENST00000485994 DIABLOQ9NR28 239 aa5.45□□□□□ -1.54
VPS50-218ENST00000485994 SLC35D1Q9NTN3 355 aa5.45□□□□□ -1.54
VPS50-218ENST00000485994 AURKAIP1Q9NWT8 199 aaPredicted RBP5.45□□□□□ -1.54
VPS50-218ENST00000485994 RHBDL2Q9NX52 303 aa5.45□□□□□ -1.54
VPS50-218ENST00000485994 ZNF230Q9UIE0 474 aaPredicted RBP5.45□□□□□ -1.54
VPS50-218ENST00000485994 ELF5Q9UKW6 265 aaPredicted RBP5.45□□□□□ -1.54
VPS50-218ENST00000485994 OR2W1Q9Y3N9 320 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms