RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 NDUFA3O95167 84 aa9.85□□□□□ -0.83
PTCD1-205ENST00000485746 RRASP10301 218 aa9.85□□□□□ -0.83
PTCD1-205ENST00000485746 RPL23AP62750 156 aaKnown RBP9.85□□□□□ -0.83
PTCD1-205ENST00000485746 MZT2AQ6P582 158 aa9.85□□□□□ -0.83
PTCD1-205ENST00000485746 GVQW1Q8N7I0 195 aa9.85□□□□□ -0.83
PTCD1-205ENST00000485746 BVESQ8NE79 360 aa9.85□□□□□ -0.83
PTCD1-205ENST00000485746 KLHL30-AS1Q8NEE0 82 aa9.85□□□□□ -0.83
PTCD1-205ENST00000485746 ADTRPQ96IZ2 230 aa9.85□□□□□ -0.83
PTCD1-205ENST00000485746 DCUN1D5Q9BTE7 237 aa9.85□□□□□ -0.83
PTCD1-205ENST00000485746 NECAP2Q9NVZ3 263 aa9.85□□□□□ -0.83
PTCD1-205ENST00000485746 OR2W1Q9Y3N9 320 aa9.85□□□□□ -0.83
PTCD1-205ENST00000485746 A3GALT2U3KPV4 340 aa9.85□□□□□ -0.83
PTCD1-205ENST00000485746 IGHV7-81A0A0B4J1V7 117 aa9.84□□□□□ -0.83
PTCD1-205ENST00000485746 FAM25AB3EWG3 89 aa9.84□□□□□ -0.83
PTCD1-205ENST00000485746 FAM25CB3EWG5 89 aa9.84□□□□□ -0.83
PTCD1-205ENST00000485746 FAM25GB3EWG6 89 aa9.84□□□□□ -0.83
PTCD1-205ENST00000485746 SHOXO15266 292 aa9.84□□□□□ -0.83
PTCD1-205ENST00000485746 ATP6V0E1O15342 81 aa9.84□□□□□ -0.83
PTCD1-205ENST00000485746 PROP1O75360 226 aa9.84□□□□□ -0.83
PTCD1-205ENST00000485746 ELANEP08246 267 aa9.84□□□□□ -0.83
PTCD1-205ENST00000485746 PTHLHP12272 177 aa9.84□□□□□ -0.83
PTCD1-205ENST00000485746 TMEM267Q0VDI3 215 aaPredicted RBP9.84□□□□□ -0.83
PTCD1-205ENST00000485746 FOXE3Q13461 319 aa9.84□□□□□ -0.83
PTCD1-205ENST00000485746 PSG5Q15238 335 aa9.84□□□□□ -0.83
PTCD1-205ENST00000485746 ECSCRQ19T08 205 aa9.84□□□□□ -0.83
PTCD1-205ENST00000485746 ZNF660Q6AZW8 331 aaPredicted RBP9.84□□□□□ -0.83
PTCD1-205ENST00000485746 HOGA1Q86XE5 327 aa9.84□□□□□ -0.83
PTCD1-205ENST00000485746 ANKRD13BQ86YJ7 626 aa9.84□□□□□ -0.83
PTCD1-205ENST00000485746 ACOT12Q8WYK0 555 aa9.84□□□□□ -0.83
PTCD1-205ENST00000485746 MRPS7Q9Y2R9 242 aaKnown RBP9.84□□□□□ -0.83
PTCD1-205ENST00000485746 TRAV41A0A0B4J266 112 aa9.83□□□□□ -0.84
PTCD1-205ENST00000485746 G3V4G9 280 aa9.83□□□□□ -0.84
PTCD1-205ENST00000485746 FCN1O00602 326 aa9.83□□□□□ -0.84
PTCD1-205ENST00000485746 SLC25A17O43808 307 aa9.83□□□□□ -0.84
PTCD1-205ENST00000485746 SPDEFO95238 335 aa9.83□□□□□ -0.84
PTCD1-205ENST00000485746 CNIH1O95406 144 aa9.83□□□□□ -0.84
PTCD1-205ENST00000485746 IGKV1-16P04430 117 aa9.83□□□□□ -0.84
PTCD1-205ENST00000485746 IGF1P05019 195 aa9.83□□□□□ -0.84
PTCD1-205ENST00000485746 RPLP1P05386 114 aaKnown RBP9.83□□□□□ -0.84
PTCD1-205ENST00000485746 FCGR2CP31995 323 aa9.83□□□□□ -0.84
PTCD1-205ENST00000485746 LGALS7P47929 136 aa9.83□□□□□ -0.84
PTCD1-205ENST00000485746 TAS2R20P59543 309 aa9.83□□□□□ -0.84
PTCD1-205ENST00000485746 GNB1P62873 340 aa9.83□□□□□ -0.84
PTCD1-205ENST00000485746 LCNL1Q6ZST4 164 aa9.83□□□□□ -0.84
PTCD1-205ENST00000485746 C8orf86Q6ZUL3 223 aa9.83□□□□□ -0.84
PTCD1-205ENST00000485746 ZNF695Q8IW36 515 aa9.83□□□□□ -0.84
PTCD1-205ENST00000485746 ZNF645Q8N7E2 425 aa9.83□□□□□ -0.84
PTCD1-205ENST00000485746 AP3S1Q92572 193 aa9.83□□□□□ -0.84
PTCD1-205ENST00000485746 HARBI1Q96MB7 349 aa9.83□□□□□ -0.84
PTCD1-205ENST00000485746 NAA50Q9GZZ1 169 aaKnown RBP9.83□□□□□ -0.84
PTCD1-205ENST00000485746 PRELID3BQ9Y3B1 194 aa9.83□□□□□ -0.84
PTCD1-205ENST00000485746 G3V318 75 aa9.82□□□□□ -0.84
PTCD1-205ENST00000485746 NOL3O60936 208 aaKnown RBP9.82□□□□□ -0.84
PTCD1-205ENST00000485746 CRYZL1O95825 349 aa9.82□□□□□ -0.84
PTCD1-205ENST00000485746 CA2P00918 260 aa9.82□□□□□ -0.84
PTCD1-205ENST00000485746 HLA-DQB1P01920 261 aa9.82□□□□□ -0.84
PTCD1-205ENST00000485746 CD40LGP29965 261 aa9.82□□□□□ -0.84
PTCD1-205ENST00000485746 DUTP33316 252 aaKnown RBP9.82□□□□□ -0.84
PTCD1-205ENST00000485746 PRSS3P35030 304 aa9.82□□□□□ -0.84
PTCD1-205ENST00000485746 RAB25P57735 213 aa9.82□□□□□ -0.84
PTCD1-205ENST00000485746 CX3CL1P78423 397 aa9.82□□□□□ -0.84
PTCD1-205ENST00000485746 VMA21Q3ZAQ7 101 aa9.82□□□□□ -0.84
PTCD1-205ENST00000485746 C18orf65Q6ZTR6 163 aa9.82□□□□□ -0.84
PTCD1-205ENST00000485746 PPP1R27Q86WC6 154 aa9.82□□□□□ -0.84
PTCD1-205ENST00000485746 SECTM1Q8WVN6 248 aa9.82□□□□□ -0.84
PTCD1-205ENST00000485746 C5orf30Q96GV9 206 aa9.82□□□□□ -0.84
PTCD1-205ENST00000485746 A0A1W2PN81 502 aa9.81□□□□□ -0.84
PTCD1-205ENST00000485746 HPGDSO60760 199 aa9.81□□□□□ -0.84
PTCD1-205ENST00000485746 FCGR3BO75015 233 aa9.81□□□□□ -0.84
PTCD1-205ENST00000485746 GABARAPO95166 117 aa9.81□□□□□ -0.84
PTCD1-205ENST00000485746 IGHG4P01861 327 aa9.81□□□□□ -0.84
PTCD1-205ENST00000485746 APOA1P02647 267 aa9.81□□□□□ -0.84
PTCD1-205ENST00000485746 EIF4EP06730 217 aaKnown RBP9.81□□□□□ -0.84
PTCD1-205ENST00000485746 ZNF182P17025 639 aaPredicted RBP9.81□□□□□ -0.84
PTCD1-205ENST00000485746 AADACP22760 399 aa9.81□□□□□ -0.84
PTCD1-205ENST00000485746 SLC6A1P30531 599 aa9.81□□□□□ -0.84
PTCD1-205ENST00000485746 CHRNA7P36544 502 aa9.81□□□□□ -0.84
PTCD1-205ENST00000485746 MYCNOSP40205 109 aa9.81□□□□□ -0.84
PTCD1-205ENST00000485746 FXYD4P59646 89 aa9.81□□□□□ -0.84
PTCD1-205ENST00000485746 HERV-K104P61576 105 aa9.81□□□□□ -0.84
PTCD1-205ENST00000485746 FXYD3Q14802 87 aa9.81□□□□□ -0.84
PTCD1-205ENST00000485746 CDK10Q15131 360 aa9.81□□□□□ -0.84
PTCD1-205ENST00000485746 OXLD1Q5BKU9 147 aa9.81□□□□□ -0.84
PTCD1-205ENST00000485746 UNQ5815/PRO19632Q6UWF5 114 aa9.81□□□□□ -0.84
PTCD1-205ENST00000485746 ZNF562Q6V9R5 426 aa9.81□□□□□ -0.84
PTCD1-205ENST00000485746 KCTD9Q7L273 389 aa9.81□□□□□ -0.84
PTCD1-205ENST00000485746 CLVS1Q8IUQ0 354 aaPredicted RBP9.81□□□□□ -0.84
PTCD1-205ENST00000485746 OR5AP2Q8NGF4 316 aa9.81□□□□□ -0.84
PTCD1-205ENST00000485746 GRPEL2Q8TAA5 225 aa9.81□□□□□ -0.84
PTCD1-205ENST00000485746 TCTEX1D2Q8WW35 142 aa9.81□□□□□ -0.84
PTCD1-205ENST00000485746 CMTM3Q96MX0 182 aa9.81□□□□□ -0.84
PTCD1-205ENST00000485746 SLC5A7Q9GZV3 580 aa9.81□□□□□ -0.84
PTCD1-205ENST00000485746 EHFQ9NZC4 300 aa9.81□□□□□ -0.84
PTCD1-205ENST00000485746 RBMX2Q9Y388 322 aaKnown RBP9.81□□□□□ -0.84
PTCD1-205ENST00000485746 IGKV1D-13A0A0B4J2D9 117 aa9.8□□□□□ -0.84
PTCD1-205ENST00000485746 PMP2P02689 132 aa9.8□□□□□ -0.84
PTCD1-205ENST00000485746 IGKV1-13P0DP09 117 aa9.8□□□□□ -0.84
PTCD1-205ENST00000485746 IGLL1P15814 213 aa9.8□□□□□ -0.84
PTCD1-205ENST00000485746 CDX1P47902 265 aaPredicted RBP9.8□□□□□ -0.84
PTCD1-205ENST00000485746 ALDH3B2P48448 385 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms