RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 CCR7P32248 378 aa1.86□□□□□ -2.11
SMC4-215ENST00000484799 CDKN2CP42773 168 aa1.86□□□□□ -2.11
SMC4-215ENST00000484799 OMPP47874 163 aa1.86□□□□□ -2.11
SMC4-215ENST00000484799 RAB5BP61020 215 aa1.86□□□□□ -2.11
SMC4-215ENST00000484799 NAA20P61599 178 aa1.86□□□□□ -2.11
SMC4-215ENST00000484799 RSU1Q15404 277 aa1.86□□□□□ -2.11
SMC4-215ENST00000484799 TAF9Q16594 264 aa1.86□□□□□ -2.11
SMC4-215ENST00000484799 NOXRED1Q6NXP6 359 aa1.86□□□□□ -2.11
SMC4-215ENST00000484799 SCXQ7RTU7 201 aa1.86□□□□□ -2.11
SMC4-215ENST00000484799 GID4Q8IVV7 300 aa1.86□□□□□ -2.11
SMC4-215ENST00000484799 BAP18Q8IXM2 172 aa1.86□□□□□ -2.11
SMC4-215ENST00000484799 OR1M1Q8NGA1 313 aa1.86□□□□□ -2.11
SMC4-215ENST00000484799 OR10A6Q8NH74 314 aa1.86□□□□□ -2.11
SMC4-215ENST00000484799 ASB17Q8WXJ9 295 aa1.86□□□□□ -2.11
SMC4-215ENST00000484799 OR8B2Q96RD0 313 aa1.86□□□□□ -2.11
SMC4-215ENST00000484799 MGLLQ99685 303 aa1.86□□□□□ -2.11
SMC4-215ENST00000484799 TMEM109Q9BVC6 243 aa1.86□□□□□ -2.11
SMC4-215ENST00000484799 PARD6GQ9BYG4 376 aaPredicted RBP1.86□□□□□ -2.11
SMC4-215ENST00000484799 TAS2R9Q9NYW1 312 aa1.86□□□□□ -2.11
SMC4-215ENST00000484799 SNX12Q9UMY4 172 aa1.86□□□□□ -2.11
SMC4-215ENST00000484799 LTBP4Q8N2S1 1624 aa1.86□□□□□ -2.11
SMC4-215ENST00000484799 ZNF638Q14966 1978 aaKnown RBP1.86□□□□□ -2.11
SMC4-215ENST00000484799 EVC2Q86UK5 1308 aa1.86□□□□□ -2.11
SMC4-215ENST00000484799 KIF15Q9NS87 1388 aa1.85□□□□□ -2.11
SMC4-215ENST00000484799 NACADO15069 1562 aa1.85□□□□□ -2.11
SMC4-215ENST00000484799 CACNA1DQ01668 2161 aa1.85□□□□□ -2.11
SMC4-215ENST00000484799 A0A1B0GW54 56 aa1.85□□□□□ -2.11
SMC4-215ENST00000484799 NDUFB2O95178 105 aa1.85□□□□□ -2.11
SMC4-215ENST00000484799 APOMO95445 188 aa1.85□□□□□ -2.11
SMC4-215ENST00000484799 IFNA16P05015 189 aa1.85□□□□□ -2.11
SMC4-215ENST00000484799 CRYGDP07320 174 aa1.85□□□□□ -2.11
SMC4-215ENST00000484799 SLC25A16P16260 332 aa1.85□□□□□ -2.11
SMC4-215ENST00000484799 ZNF7P17097 686 aaPredicted RBP1.85□□□□□ -2.11
SMC4-215ENST00000484799 COL8A2P25067 703 aa1.85□□□□□ -2.11
SMC4-215ENST00000484799 LPAR6P43657 344 aa1.85□□□□□ -2.11
SMC4-215ENST00000484799 MARCKSL1P49006 195 aa1.85□□□□□ -2.11
SMC4-215ENST00000484799 SULT1A1P50225 295 aa1.85□□□□□ -2.11
SMC4-215ENST00000484799 DAPP51397 102 aa1.85□□□□□ -2.11
SMC4-215ENST00000484799 CTBP2P56545 445 aa1.85□□□□□ -2.11
SMC4-215ENST00000484799 TSPEAR-AS2P59090 65 aa1.85□□□□□ -2.11
SMC4-215ENST00000484799 MRPS15P82914 257 aaKnown RBP1.85□□□□□ -2.11
SMC4-215ENST00000484799 FADDQ13158 208 aa1.85□□□□□ -2.11
SMC4-215ENST00000484799 JOSD1Q15040 202 aaPredicted RBP1.85□□□□□ -2.11
SMC4-215ENST00000484799 TMEM176BQ3YBM2 270 aaPredicted RBP1.85□□□□□ -2.11
SMC4-215ENST00000484799 SYPL2Q5VXT5 272 aa1.85□□□□□ -2.11
SMC4-215ENST00000484799 OR10K2Q6IF99 312 aa1.85□□□□□ -2.11
SMC4-215ENST00000484799 SPOPLQ6IQ16 392 aa1.85□□□□□ -2.11
SMC4-215ENST00000484799 WDR59Q6PJI9 974 aa1.85□□□□□ -2.11
SMC4-215ENST00000484799 RASL11AQ6T310 242 aa1.85□□□□□ -2.11
SMC4-215ENST00000484799 SBSNQ6UWP8 590 aa1.85□□□□□ -2.11
SMC4-215ENST00000484799 HIST2H3AQ71DI3 136 aa1.85□□□□□ -2.11
SMC4-215ENST00000484799 OR11H1Q8NG94 326 aa1.85□□□□□ -2.11
SMC4-215ENST00000484799 IMP4Q96G21 291 aaKnown RBP1.85□□□□□ -2.11
SMC4-215ENST00000484799 C11orf1Q9H5F2 150 aa1.85□□□□□ -2.11
SMC4-215ENST00000484799 PLCH2O75038 1416 aa1.84□□□□□ -2.11
SMC4-215ENST00000484799 LOC102725191A0A1B0GVB3 256 aa1.84□□□□□ -2.11
SMC4-215ENST00000484799 A0A1W2PNN7 141 aa1.84□□□□□ -2.11
SMC4-215ENST00000484799 OR6C6A6NF89 314 aa1.84□□□□□ -2.11
SMC4-215ENST00000484799 UBFD1O14562 309 aaKnown RBP1.84□□□□□ -2.11
SMC4-215ENST00000484799 HLA-DQB2P05538 268 aa1.84□□□□□ -2.11
SMC4-215ENST00000484799 ESDP10768 282 aa1.84□□□□□ -2.11
SMC4-215ENST00000484799 ZNF22P17026 224 aaPredicted RBP1.84□□□□□ -2.11
SMC4-215ENST00000484799 TCL1AP56279 114 aa1.84□□□□□ -2.11
SMC4-215ENST00000484799 ZNF117Q03924 483 aa1.84□□□□□ -2.11
SMC4-215ENST00000484799 OR2F1Q13607 317 aa1.84□□□□□ -2.11
SMC4-215ENST00000484799 AKIRIN2Q53H80 203 aa1.84□□□□□ -2.11
SMC4-215ENST00000484799 AMTNQ6UX39 209 aa1.84□□□□□ -2.11
SMC4-215ENST00000484799 ZNF550Q7Z398 422 aa1.84□□□□□ -2.11
SMC4-215ENST00000484799 LRRC34Q8IZ02 419 aa1.84□□□□□ -2.11
SMC4-215ENST00000484799 DIRAS2Q96HU8 199 aa1.84□□□□□ -2.11
SMC4-215ENST00000484799 CCDC42Q96M95 316 aa1.84□□□□□ -2.11
SMC4-215ENST00000484799 LRRC19Q9H756 370 aa1.84□□□□□ -2.11
SMC4-215ENST00000484799 MRPL16Q9NX20 251 aaKnown RBP1.84□□□□□ -2.11
SMC4-215ENST00000484799 ZNF391Q9UJN7 358 aa1.84□□□□□ -2.11
SMC4-215ENST00000484799 KLK5Q9Y337 293 aaPredicted RBP1.84□□□□□ -2.11
SMC4-215ENST00000484799 HEY1Q9Y5J3 304 aa1.84□□□□□ -2.11
SMC4-215ENST00000484799 COL18A1P39060 1754 aa1.84□□□□□ -2.12
SMC4-215ENST00000484799 CRB1P82279 1406 aa1.83□□□□□ -2.12
SMC4-215ENST00000484799 ADAMTSL1Q8N6G6 1762 aa1.83□□□□□ -2.12
SMC4-215ENST00000484799 ZSWIM8A7E2V4 1837 aa1.83□□□□□ -2.12
SMC4-215ENST00000484799 IGHV3-73A0A0B4J1V6 119 aa1.83□□□□□ -2.12
SMC4-215ENST00000484799 IGHV1-69-2A0A0G2JMI3 117 aa1.83□□□□□ -2.12
SMC4-215ENST00000484799 TMEM210A6NLX4 147 aa1.83□□□□□ -2.12
SMC4-215ENST00000484799 G3V3Q6 166 aa1.83□□□□□ -2.12
SMC4-215ENST00000484799 OR5G3P0C626 314 aa1.83□□□□□ -2.12
SMC4-215ENST00000484799 CRHBPP24387 322 aa1.83□□□□□ -2.12
SMC4-215ENST00000484799 FKBP1AP62942 108 aaKnown RBP1.83□□□□□ -2.12
SMC4-215ENST00000484799 HTR4Q13639 388 aa1.83□□□□□ -2.12
SMC4-215ENST00000484799 TRAPPC5Q8IUR0 188 aa1.83□□□□□ -2.12
SMC4-215ENST00000484799 C1orf174Q8IYL3 243 aa1.83□□□□□ -2.12
SMC4-215ENST00000484799 LMX1AQ8TE12 382 aa1.83□□□□□ -2.12
SMC4-215ENST00000484799 C12orf43Q96C57 262 aaKnown RBP1.83□□□□□ -2.12
SMC4-215ENST00000484799 CHMP6Q96FZ7 201 aa1.83□□□□□ -2.12
SMC4-215ENST00000484799 CCL13Q99616 98 aa1.83□□□□□ -2.12
SMC4-215ENST00000484799 TMEM222Q9H0R3 208 aa1.83□□□□□ -2.12
SMC4-215ENST00000484799 OR51V1Q9H2C8 321 aa1.83□□□□□ -2.12
SMC4-215ENST00000484799 OR51I1Q9H343 314 aa1.83□□□□□ -2.12
SMC4-215ENST00000484799 XPNPEP1Q9NQW7 623 aa1.83□□□□□ -2.12
SMC4-215ENST00000484799 TXNL4BQ9NX01 149 aaKnown RBP1.83□□□□□ -2.12
SMC4-215ENST00000484799 AK3Q9UIJ7 227 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms