RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 ABCB10Q9NRK6 738 aa5.16□□□□□ -1.58
NCL-209ENST00000484328 SLC2A9Q9NRM0 540 aa5.16□□□□□ -1.58
NCL-209ENST00000484328 MCUBQ9NWR8 336 aa5.16□□□□□ -1.58
NCL-209ENST00000484328 RNF150Q9ULK6 438 aa5.16□□□□□ -1.58
NCL-209ENST00000484328 GPR132Q9UNW8 380 aa5.16□□□□□ -1.58
NCL-209ENST00000484328 TCF19Q9Y242 345 aa5.16□□□□□ -1.58
NCL-209ENST00000484328 FAM96BQ9Y3D0 163 aa5.16□□□□□ -1.58
NCL-209ENST00000484328 POMT1Q9Y6A1 747 aa5.16□□□□□ -1.58
NCL-209ENST00000484328 A0A0A6YYJ9 748 aa5.15□□□□□ -1.59
NCL-209ENST00000484328 DNAJC9-AS1A6NH13 148 aa5.15□□□□□ -1.59
NCL-209ENST00000484328 CENPXA8MT69 81 aa5.15□□□□□ -1.59
NCL-209ENST00000484328 H3BUX3 64 aa5.15□□□□□ -1.59
NCL-209ENST00000484328 RBFOX2O43251 390 aaKnown RBP eCLIP5.15□□□□□ -1.59
NCL-209ENST00000484328 HOXA3O43365 443 aaPredicted RBP5.15□□□□□ -1.59
NCL-209ENST00000484328 PGLYRP1O75594 196 aaPredicted RBP5.15□□□□□ -1.59
NCL-209ENST00000484328 IGHV4-59P01825 116 aa5.15□□□□□ -1.59
NCL-209ENST00000484328 RLN1P04808 185 aa5.15□□□□□ -1.59
NCL-209ENST00000484328 SNRNP70P08621 437 aaKnown RBP5.15□□□□□ -1.59
NCL-209ENST00000484328 BRS3P32247 399 aa5.15□□□□□ -1.59
NCL-209ENST00000484328 MC5RP33032 325 aa5.15□□□□□ -1.59
NCL-209ENST00000484328 RAB13P51153 203 aa5.15□□□□□ -1.59
NCL-209ENST00000484328 CCR6P51684 374 aa5.15□□□□□ -1.59
NCL-209ENST00000484328 BRWD1-AS2P59051 145 aa5.15□□□□□ -1.59
NCL-209ENST00000484328 LINC00205P59089 165 aa5.15□□□□□ -1.59
NCL-209ENST00000484328 TAGLNQ01995 201 aaKnown RBP5.15□□□□□ -1.59
NCL-209ENST00000484328 DHRS7BQ6IAN0 325 aaPredicted RBP5.15□□□□□ -1.59
NCL-209ENST00000484328 LIAT1Q6ZQX7 453 aa5.15□□□□□ -1.59
NCL-209ENST00000484328 THNSL2Q86YJ6 484 aa5.15□□□□□ -1.59
NCL-209ENST00000484328 PDPNQ86YL7 162 aa5.15□□□□□ -1.59
NCL-209ENST00000484328 CMTM1Q8IZ96 169 aa5.15□□□□□ -1.59
NCL-209ENST00000484328 DRAXINQ8NBI3 349 aaPredicted RBP5.15□□□□□ -1.59
NCL-209ENST00000484328 OR5R1Q8NH85 324 aa5.15□□□□□ -1.59
NCL-209ENST00000484328 ZFAND1Q8TCF1 268 aa5.15□□□□□ -1.59
NCL-209ENST00000484328 TMEM230Q96A57 120 aa5.15□□□□□ -1.59
NCL-209ENST00000484328 SSX3Q99909 188 aa5.15□□□□□ -1.59
NCL-209ENST00000484328 RTBDNQ9BSG5 229 aaPredicted RBP5.15□□□□□ -1.59
NCL-209ENST00000484328 FAM212BQ9NTI7 297 aaPredicted RBP5.15□□□□□ -1.59
NCL-209ENST00000484328 VPREB3Q9UKI3 123 aa5.15□□□□□ -1.59
NCL-209ENST00000484328 VSIG4Q9Y279 399 aa5.15□□□□□ -1.59
NCL-209ENST00000484328 WASHC3Q9Y3C0 194 aa5.15□□□□□ -1.59
NCL-209ENST00000484328 RBM7Q9Y580 266 aaKnown RBP5.15□□□□□ -1.59
NCL-209ENST00000484328 CUBNO60494 3623 aa5.15□□□□□ -1.59
NCL-209ENST00000484328 NIPBLQ6KC79 2804 aaeCLIP5.15□□□□□ -1.59
NCL-209ENST00000484328 LINC00854A0A1B0GVQ3 168 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 A6NDX4 124 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 CRYM-AS1A6NIL9 109 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 RNF212BA8MTL3 300 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 H0Y980 276 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 TNFSF12O43508 249 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 CHST1O43916 411 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 B3GALNT1O75752 331 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 OR2F2O95006 317 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 NDUFA3O95167 84 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 SPDEFO95238 335 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 PTTG1O95997 202 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 MOSP00540 346 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 IGKV1D-33P01593 117 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 IGKV1-33P01594 117 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 APOA2P02652 100 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 IGKV1-16P04430 117 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 RNASE1P07998 156 aaKnown RBP5.14□□□□□ -1.59
NCL-209ENST00000484328 RRASP10301 218 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 PI3P19957 117 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 F2RP25116 425 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 KIR2DS2P43631 304 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 MECP2P51608 486 aaKnown RBP5.14□□□□□ -1.59
NCL-209ENST00000484328 PIGPP57054 158 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 DEFA1P59665 94 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 DEFA3P59666 94 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 RPL15P61313 204 aaKnown RBP5.14□□□□□ -1.59
NCL-209ENST00000484328 SUPT4H1P63272 117 aaKnown RBP5.14□□□□□ -1.59
NCL-209ENST00000484328 CATR1Q13166 79 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 DCTN2Q13561 401 aaKnown RBP5.14□□□□□ -1.59
NCL-209ENST00000484328 SLC9A3R2Q15599 337 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 PHLDA2Q53GA4 152 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 TMEM177Q53S58 311 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 MZT2BQ6NZ67 158 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 CCBE1Q6UXH8 406 aaPredicted RBP5.14□□□□□ -1.59
NCL-209ENST00000484328 GLDNQ6ZMI3 551 aaPredicted RBP5.14□□□□□ -1.59
NCL-209ENST00000484328 C16orf82Q7Z2V1 217 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 MOB3BQ86TA1 216 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 TBC1D26Q86UD7 250 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 LURAP1LQ8IV03 231 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 TCTEX1D1Q8N7M0 179 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 OR8H1Q8NGG4 311 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 OR2T10Q8NGZ9 312 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 ZNF418Q8TF45 676 aaPredicted RBP5.14□□□□□ -1.59
NCL-209ENST00000484328 ZDHHC16Q969W1 377 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 EAF1Q96JC9 268 aaPredicted RBP5.14□□□□□ -1.59
NCL-209ENST00000484328 SCGB3A2Q96PL1 93 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 GPHA2Q96T91 129 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 CHIAQ9BZP6 476 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 C20orf85Q9H1P6 137 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 DPAGT1Q9H3H5 408 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 LIN7CQ9NUP9 197 aaKnown RBP5.14□□□□□ -1.59
NCL-209ENST00000484328 COPZ2Q9P299 210 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 PITPNC1Q9UKF7 332 aa5.14□□□□□ -1.59
NCL-209ENST00000484328 C14orf166Q9Y224 244 aaKnown RBP5.14□□□□□ -1.59
NCL-209ENST00000484328 SETD2Q9BYW2 2564 aaPredicted RBP5.14□□□□□ -1.59
NCL-209ENST00000484328 ZFHX3Q15911 3703 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms