RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 LSM2Q9Y333 95 aaKnown RBP10.62□□□□□ -0.71
VARS-226ENST00000483275 C13orf42A0A1B0GVH6 325 aa10.61□□□□□ -0.71
VARS-226ENST00000483275 IZUMO1RA6ND01 250 aa10.61□□□□□ -0.71
VARS-226ENST00000483275 DENRO43583 198 aaKnown RBP10.61□□□□□ -0.71
VARS-226ENST00000483275 SCTP09683 121 aa10.61□□□□□ -0.71
VARS-226ENST00000483275 PSMA1P25786 263 aaKnown RBP10.61□□□□□ -0.71
VARS-226ENST00000483275 CEACAM6P40199 344 aa10.61□□□□□ -0.71
VARS-226ENST00000483275 GABARAPL2P60520 117 aa10.61□□□□□ -0.71
VARS-226ENST00000483275 QRFPP83859 136 aa10.61□□□□□ -0.71
VARS-226ENST00000483275 MLLT11Q13015 90 aaPredicted RBP10.61□□□□□ -0.71
VARS-226ENST00000483275 LIPKQ5VXJ0 399 aa10.61□□□□□ -0.71
VARS-226ENST00000483275 ZNF562Q6V9R5 426 aa10.61□□□□□ -0.71
VARS-226ENST00000483275 IL34Q6ZMJ4 242 aa10.61□□□□□ -0.71
VARS-226ENST00000483275 POC5Q8NA72 575 aa10.61□□□□□ -0.71
VARS-226ENST00000483275 PLEKHJ1Q9NW61 149 aa10.61□□□□□ -0.71
VARS-226ENST00000483275 GHRLQ9UBU3 117 aa10.61□□□□□ -0.71
VARS-226ENST00000483275 IGKV1-6A0A0C4DH72 117 aa10.6□□□□□ -0.71
VARS-226ENST00000483275 M0R1X1 148 aa10.6□□□□□ -0.71
VARS-226ENST00000483275 SLC22A1O15245 554 aa10.6□□□□□ -0.71
VARS-226ENST00000483275 MRPS14O60783 128 aaKnown RBP10.6□□□□□ -0.71
VARS-226ENST00000483275 RBMXL2O75526 392 aaKnown RBP10.6□□□□□ -0.71
VARS-226ENST00000483275 RBBP9O75884 186 aa10.6□□□□□ -0.71
VARS-226ENST00000483275 CNIH1O95406 144 aa10.6□□□□□ -0.71
VARS-226ENST00000483275 CD3GP09693 182 aa10.6□□□□□ -0.71
VARS-226ENST00000483275 UBBP0CG47 229 aa10.6□□□□□ -0.71
VARS-226ENST00000483275 MC5RP33032 325 aa10.6□□□□□ -0.71
VARS-226ENST00000483275 MAP2K4P45985 399 aa10.6□□□□□ -0.71
VARS-226ENST00000483275 TBCEQ15813 527 aaPredicted RBP10.6□□□□□ -0.71
VARS-226ENST00000483275 HSD17B12Q53GQ0 312 aa10.6□□□□□ -0.71
VARS-226ENST00000483275 C1orf100Q5SVJ3 147 aa10.6□□□□□ -0.71
VARS-226ENST00000483275 MOB1BQ7L9L4 216 aa10.6□□□□□ -0.71
VARS-226ENST00000483275 ZNF367Q7RTV3 350 aa10.6□□□□□ -0.71
VARS-226ENST00000483275 CEACAM19Q7Z692 300 aa10.6□□□□□ -0.71
VARS-226ENST00000483275 OR9G4Q8NGQ1 327 aa10.6□□□□□ -0.71
VARS-226ENST00000483275 MGLLQ99685 303 aa10.6□□□□□ -0.71
VARS-226ENST00000483275 SPATA25Q9BR10 227 aa10.6□□□□□ -0.71
VARS-226ENST00000483275 TM2D1Q9BX74 207 aa10.6□□□□□ -0.71
VARS-226ENST00000483275 YTHDF1Q9BYJ9 559 aaKnown RBP10.6□□□□□ -0.71
VARS-226ENST00000483275 LPAR5Q9H1C0 372 aa10.6□□□□□ -0.71
VARS-226ENST00000483275 SLA2Q9H6Q3 261 aa10.6□□□□□ -0.71
VARS-226ENST00000483275 LRRC42Q9Y546 428 aa10.6□□□□□ -0.71
VARS-226ENST00000483275 TMEM14DPA8MWL7 114 aa10.59□□□□□ -0.71
VARS-226ENST00000483275 ZP3P21754 424 aa10.59□□□□□ -0.71
VARS-226ENST00000483275 ZBTB25P24278 435 aa10.59□□□□□ -0.71
VARS-226ENST00000483275 CD40LGP29965 261 aa10.59□□□□□ -0.71
VARS-226ENST00000483275 DYRK1AQ13627 763 aa10.59□□□□□ -0.71
VARS-226ENST00000483275 TPBGQ13641 420 aa10.59□□□□□ -0.71
VARS-226ENST00000483275 KLF5Q13887 457 aaPredicted RBP10.59□□□□□ -0.71
VARS-226ENST00000483275 GLT8D1Q68CQ7 371 aa10.59□□□□□ -0.71
VARS-226ENST00000483275 KCNG3Q8TAE7 436 aa10.59□□□□□ -0.71
VARS-226ENST00000483275 TMEM203Q969S6 136 aa10.59□□□□□ -0.71
VARS-226ENST00000483275 C5orf30Q96GV9 206 aa10.59□□□□□ -0.71
VARS-226ENST00000483275 TSNAXQ99598 290 aaKnown RBP10.59□□□□□ -0.71
VARS-226ENST00000483275 GFI1Q99684 422 aa10.59□□□□□ -0.71
VARS-226ENST00000483275 WFDC10AQ9H1F0 79 aa10.59□□□□□ -0.71
VARS-226ENST00000483275 PLEKHA3Q9HB20 300 aa10.59□□□□□ -0.71
VARS-226ENST00000483275 RANGRFQ9HD47 186 aaPredicted RBP10.59□□□□□ -0.71
VARS-226ENST00000483275 ARL6IP5O75915 188 aa10.58□□□□□ -0.72
VARS-226ENST00000483275 IGLV2-23P01705 113 aa10.58□□□□□ -0.72
VARS-226ENST00000483275 APOA2P02652 100 aa10.58□□□□□ -0.72
VARS-226ENST00000483275 PLA2G7Q13093 441 aa10.58□□□□□ -0.72
VARS-226ENST00000483275 EDARADDQ8WWZ3 215 aa10.58□□□□□ -0.72
VARS-226ENST00000483275 PHYHIPQ92561 330 aa10.58□□□□□ -0.72
VARS-226ENST00000483275 ARHGAP5-AS1Q96IT6 56 aa10.58□□□□□ -0.72
VARS-226ENST00000483275 THAP7Q9BT49 309 aaPredicted RBP10.58□□□□□ -0.72
VARS-226ENST00000483275 TUBA4BQ9H853 241 aa10.58□□□□□ -0.72
VARS-226ENST00000483275 Q9N2K0 584 aa10.58□□□□□ -0.72
VARS-226ENST00000483275 C12orf4Q9NQ89 552 aa10.58□□□□□ -0.72
VARS-226ENST00000483275 SLC35D1Q9NTN3 355 aa10.58□□□□□ -0.72
VARS-226ENST00000483275 COA4Q9NYJ1 87 aa10.58□□□□□ -0.72
VARS-226ENST00000483275 RDH8Q9NYR8 311 aa10.58□□□□□ -0.72
VARS-226ENST00000483275 ZNF221Q9UK13 617 aa10.58□□□□□ -0.72
VARS-226ENST00000483275 SELENOKQ9Y6D0 94 aa10.58□□□□□ -0.72
VARS-226ENST00000483275 A8MZ25 164 aa10.57□□□□□ -0.72
VARS-226ENST00000483275 SPDEFO95238 335 aa10.57□□□□□ -0.72
VARS-226ENST00000483275 BPNT1O95861 308 aa10.57□□□□□ -0.72
VARS-226ENST00000483275 CSN3P07498 182 aa10.57□□□□□ -0.72
VARS-226ENST00000483275 SRMP19623 302 aa10.57□□□□□ -0.72
VARS-226ENST00000483275 EDN2P20800 178 aa10.57□□□□□ -0.72
VARS-226ENST00000483275 VEGFCP49767 419 aa10.57□□□□□ -0.72
VARS-226ENST00000483275 CLDN12P56749 244 aa10.57□□□□□ -0.72
VARS-226ENST00000483275 RPS25P62851 125 aaKnown RBP10.57□□□□□ -0.72
VARS-226ENST00000483275 IDO2Q6ZQW0 420 aa10.57□□□□□ -0.72
VARS-226ENST00000483275 PDPNQ86YL7 162 aa10.57□□□□□ -0.72
VARS-226ENST00000483275 BVESQ8NE79 360 aa10.57□□□□□ -0.72
VARS-226ENST00000483275 OR6M1Q8NGM8 313 aa10.57□□□□□ -0.72
VARS-226ENST00000483275 MAFIPQ8WZ33 124 aa10.57□□□□□ -0.72
VARS-226ENST00000483275 HARBI1Q96MB7 349 aa10.57□□□□□ -0.72
VARS-226ENST00000483275 OR2D2Q9H210 308 aa10.57□□□□□ -0.72
VARS-226ENST00000483275 ACOT13Q9NPJ3 140 aa10.57□□□□□ -0.72
VARS-226ENST00000483275 TRBV6-6A0A0A6YYG2 114 aa10.56□□□□□ -0.72
VARS-226ENST00000483275 FOXI3A8MTJ6 420 aaPredicted RBP10.56□□□□□ -0.72
VARS-226ENST00000483275 ITGB1BP1O14713 200 aa10.56□□□□□ -0.72
VARS-226ENST00000483275 BET1O15155 118 aa10.56□□□□□ -0.72
VARS-226ENST00000483275 PRH1P02810 166 aa10.56□□□□□ -0.72
VARS-226ENST00000483275 UCHL1P09936 223 aa10.56□□□□□ -0.72
VARS-226ENST00000483275 RANBP1P43487 201 aa10.56□□□□□ -0.72
VARS-226ENST00000483275 PLAC9Q5JTB6 97 aa10.56□□□□□ -0.72
VARS-226ENST00000483275 GTSCR1Q86UQ5 136 aa10.56□□□□□ -0.72
VARS-226ENST00000483275 FCGR1BQ92637 280 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms