RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 CFHR3Q02985 330 aa10.89□□□□□ -0.67
VARS-225ENST00000482996 SPCS2Q15005 226 aa10.89□□□□□ -0.67
VARS-225ENST00000482996 IDNKQ5T6J7 187 aa10.89□□□□□ -0.67
VARS-225ENST00000482996 HACD4Q5VWC8 232 aa10.89□□□□□ -0.67
VARS-225ENST00000482996 LINC00482Q8N8I6 264 aa10.89□□□□□ -0.67
VARS-225ENST00000482996 RNF152Q8N8N0 203 aa10.89□□□□□ -0.67
VARS-225ENST00000482996 DRAXINQ8NBI3 349 aaPredicted RBP10.89□□□□□ -0.67
VARS-225ENST00000482996 OR8U1Q8NH10 309 aa10.89□□□□□ -0.67
VARS-225ENST00000482996 GPR61Q9BZJ8 451 aa10.89□□□□□ -0.67
VARS-225ENST00000482996 OR2D2Q9H210 308 aa10.89□□□□□ -0.67
VARS-225ENST00000482996 FBXL15Q9H469 300 aa10.89□□□□□ -0.67
VARS-225ENST00000482996 RNF167Q9H6Y7 350 aa10.89□□□□□ -0.67
VARS-225ENST00000482996 NECAP2Q9NVZ3 263 aa10.89□□□□□ -0.67
VARS-225ENST00000482996 RHBDL2Q9NX52 303 aa10.89□□□□□ -0.67
VARS-225ENST00000482996 WSB1Q9Y6I7 421 aa10.89□□□□□ -0.67
VARS-225ENST00000482996 ATP6V0E1O15342 81 aa10.88□□□□□ -0.67
VARS-225ENST00000482996 PROP1O75360 226 aa10.88□□□□□ -0.67
VARS-225ENST00000482996 CTXN2P0C2S0 81 aa10.88□□□□□ -0.67
VARS-225ENST00000482996 CDX1P47902 265 aaPredicted RBP10.88□□□□□ -0.67
VARS-225ENST00000482996 RPS16P62249 146 aaKnown RBP10.88□□□□□ -0.67
VARS-225ENST00000482996 CBX3Q13185 183 aa10.88□□□□□ -0.67
VARS-225ENST00000482996 ZNF660Q6AZW8 331 aaPredicted RBP10.88□□□□□ -0.67
VARS-225ENST00000482996 TMEM65Q6PI78 240 aa10.88□□□□□ -0.67
VARS-225ENST00000482996 ETV3LQ6ZN32 361 aa10.88□□□□□ -0.67
VARS-225ENST00000482996 LCNL1Q6ZST4 164 aa10.88□□□□□ -0.67
VARS-225ENST00000482996 C18orf65Q6ZTR6 163 aa10.88□□□□□ -0.67
VARS-225ENST00000482996 PDPNQ86YL7 162 aa10.88□□□□□ -0.67
VARS-225ENST00000482996 CROCCP3Q8IVE0 287 aa10.88□□□□□ -0.67
VARS-225ENST00000482996 MRPL41Q8IXM3 137 aaKnown RBP10.88□□□□□ -0.67
VARS-225ENST00000482996 ZNF383Q8NA42 475 aa10.88□□□□□ -0.67
VARS-225ENST00000482996 AP3S1Q92572 193 aa10.88□□□□□ -0.67
VARS-225ENST00000482996 ST6GALNAC5Q9BVH7 336 aa10.88□□□□□ -0.67
VARS-225ENST00000482996 ELF5Q9UKW6 265 aaPredicted RBP10.88□□□□□ -0.67
VARS-225ENST00000482996 GAB2Q9UQC2 676 aa10.88□□□□□ -0.67
VARS-225ENST00000482996 DNAH3Q8TD57 4116 aa10.87□□□□□ -0.67
VARS-225ENST00000482996 TRAV41A0A0B4J266 112 aa10.87□□□□□ -0.67
VARS-225ENST00000482996 TMEM235A6NFC5 223 aa10.87□□□□□ -0.67
VARS-225ENST00000482996 TMEM127O75204 238 aa10.87□□□□□ -0.67
VARS-225ENST00000482996 SPDEFO95238 335 aa10.87□□□□□ -0.67
VARS-225ENST00000482996 ZNF182P17025 639 aaPredicted RBP10.87□□□□□ -0.67
VARS-225ENST00000482996 RORCP51449 518 aa10.87□□□□□ -0.67
VARS-225ENST00000482996 TAGLNQ01995 201 aaKnown RBP10.87□□□□□ -0.67
VARS-225ENST00000482996 ABHD5Q8WTS1 349 aa10.87□□□□□ -0.67
VARS-225ENST00000482996 NUDCD2Q8WVJ2 157 aa10.87□□□□□ -0.67
VARS-225ENST00000482996 FLYWCH2Q96CP2 140 aaKnown RBP10.87□□□□□ -0.67
VARS-225ENST00000482996 MCRIP2Q9BUT9 160 aaKnown RBP10.87□□□□□ -0.67
VARS-225ENST00000482996 SLC35D1Q9NTN3 355 aa10.87□□□□□ -0.67
VARS-225ENST00000482996 SDHAF2Q9NX18 166 aa10.87□□□□□ -0.67
VARS-225ENST00000482996 CCDC59Q9P031 241 aaKnown RBP10.87□□□□□ -0.67
VARS-225ENST00000482996 METTL1Q9UBP6 276 aaKnown RBP10.87□□□□□ -0.67
VARS-225ENST00000482996 IGKV1D-8A0A087WSZ0 117 aa10.86□□□□□ -0.67
VARS-225ENST00000482996 A0A0A6YYH2 397 aa10.86□□□□□ -0.67
VARS-225ENST00000482996 A6NJ64 397 aa10.86□□□□□ -0.67
VARS-225ENST00000482996 G3V318 75 aa10.86□□□□□ -0.67
VARS-225ENST00000482996 CCL24O00175 119 aa10.86□□□□□ -0.67
VARS-225ENST00000482996 PRB2P02812 416 aaPredicted RBP10.86□□□□□ -0.67
VARS-225ENST00000482996 IGKV1-16P04430 117 aa10.86□□□□□ -0.67
VARS-225ENST00000482996 PSMB8P28062 276 aa10.86□□□□□ -0.67
VARS-225ENST00000482996 PPIFP30405 207 aaKnown RBP10.86□□□□□ -0.67
VARS-225ENST00000482996 CX3CL1P78423 397 aa10.86□□□□□ -0.67
VARS-225ENST00000482996 TMEM267Q0VDI3 215 aaPredicted RBP10.86□□□□□ -0.67
VARS-225ENST00000482996 PSG5Q15238 335 aa10.86□□□□□ -0.67
VARS-225ENST00000482996 ECSCRQ19T08 205 aa10.86□□□□□ -0.67
VARS-225ENST00000482996 ZNF260Q3ZCT1 412 aa10.86□□□□□ -0.67
VARS-225ENST00000482996 H1FOOQ8IZA3 346 aaPredicted RBP10.86□□□□□ -0.67
VARS-225ENST00000482996 OR5H6Q8NGV6 325 aa10.86□□□□□ -0.67
VARS-225ENST00000482996 DPF1Q92782 380 aa10.86□□□□□ -0.67
VARS-225ENST00000482996 ADTRPQ96IZ2 230 aa10.86□□□□□ -0.67
VARS-225ENST00000482996 P2RX4Q99571 388 aa10.86□□□□□ -0.67
VARS-225ENST00000482996 TSC22D3Q99576 134 aa10.86□□□□□ -0.67
VARS-225ENST00000482996 TRAV18A0A075B6X5 111 aa10.85□□□□□ -0.67
VARS-225ENST00000482996 FCN1O00602 326 aa10.85□□□□□ -0.67
VARS-225ENST00000482996 RRASP10301 218 aa10.85□□□□□ -0.67
VARS-225ENST00000482996 S100A5P33763 92 aa10.85□□□□□ -0.67
VARS-225ENST00000482996 TGFBR1P36897 503 aa10.85□□□□□ -0.67
VARS-225ENST00000482996 LGALS7P47929 136 aa10.85□□□□□ -0.67
VARS-225ENST00000482996 RAB25P57735 213 aa10.85□□□□□ -0.67
VARS-225ENST00000482996 LINC00205P59089 165 aa10.85□□□□□ -0.67
VARS-225ENST00000482996 NDPQ00604 133 aa10.85□□□□□ -0.67
VARS-225ENST00000482996 RTL8BQ17RB0 113 aa10.85□□□□□ -0.67
VARS-225ENST00000482996 CNIH2Q6PI25 160 aa10.85□□□□□ -0.67
VARS-225ENST00000482996 TCTEX1D1Q8N7M0 179 aa10.85□□□□□ -0.67
VARS-225ENST00000482996 MCFD2Q8NI22 146 aa10.85□□□□□ -0.67
VARS-225ENST00000482996 DYNC2LI1Q8TCX1 351 aa10.85□□□□□ -0.67
VARS-225ENST00000482996 C4orf3Q8WVX3 66 aa10.85□□□□□ -0.67
VARS-225ENST00000482996 SLC25A38Q96DW6 304 aa10.85□□□□□ -0.67
VARS-225ENST00000482996 RAX2Q96IS3 184 aa10.85□□□□□ -0.67
VARS-225ENST00000482996 CLCC1Q96S66 551 aa10.85□□□□□ -0.67
VARS-225ENST00000482996 DIABLOQ9NR28 239 aa10.85□□□□□ -0.67
VARS-225ENST00000482996 SPATA2Q9UM82 520 aa10.85□□□□□ -0.67
VARS-225ENST00000482996 FOXA2Q9Y261 457 aaPredicted RBP10.85□□□□□ -0.67
VARS-225ENST00000482996 A3GALT2U3KPV4 340 aa10.85□□□□□ -0.67
VARS-225ENST00000482996 SLC25A17O43808 307 aa10.84□□□□□ -0.67
VARS-225ENST00000482996 SLC22A5O76082 557 aa10.84□□□□□ -0.67
VARS-225ENST00000482996 IGLV1-40P01703 118 aa10.84□□□□□ -0.67
VARS-225ENST00000482996 LUMP51884 338 aaPredicted RBP10.84□□□□□ -0.67
VARS-225ENST00000482996 CRIP2P52943 208 aaPredicted RBP10.84□□□□□ -0.67
VARS-225ENST00000482996 DEFB136Q30KP8 78 aa10.84□□□□□ -0.67
VARS-225ENST00000482996 MZT2AQ6P582 158 aa10.84□□□□□ -0.67
VARS-225ENST00000482996 ZNF562Q6V9R5 426 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms