RNA–Protein interactions for RNA: ENST00000482879.5

SDC1-206, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-206ENST00000482879 RLN1P04808 185 aa9.85□□□□□ -0.83
SDC1-206ENST00000482879 RAB13P51153 203 aa9.85□□□□□ -0.83
SDC1-206ENST00000482879 PIGPP57054 158 aa9.85□□□□□ -0.83
SDC1-206ENST00000482879 RND3P61587 244 aa9.85□□□□□ -0.83
SDC1-206ENST00000482879 RPL30P62888 115 aaKnown RBP9.85□□□□□ -0.83
SDC1-206ENST00000482879 LRRC75BQ2VPJ9 315 aa9.85□□□□□ -0.83
SDC1-206ENST00000482879 RBMS3Q6XE24 437 aaKnown RBP9.85□□□□□ -0.83
SDC1-206ENST00000482879 Q6YL49 198 aa9.85□□□□□ -0.83
SDC1-206ENST00000482879 KCTD9Q7L273 389 aa9.85□□□□□ -0.83
SDC1-206ENST00000482879 NRARPQ7Z6K4 114 aa9.85□□□□□ -0.83
SDC1-206ENST00000482879 TMED4Q7Z7H5 227 aa9.85□□□□□ -0.83
SDC1-206ENST00000482879 SIGLECL1Q8N7X8 197 aa9.85□□□□□ -0.83
SDC1-206ENST00000482879 CCDC71LQ8N9Z2 235 aa9.85□□□□□ -0.83
SDC1-206ENST00000482879 OR5AN1Q8NGI8 311 aa9.85□□□□□ -0.83
SDC1-206ENST00000482879 OR51H1Q8NH63 302 aa9.85□□□□□ -0.83
SDC1-206ENST00000482879 TCTEX1D2Q8WW35 142 aa9.85□□□□□ -0.83
SDC1-206ENST00000482879 CAPSLQ8WWF8 208 aa9.85□□□□□ -0.83
SDC1-206ENST00000482879 PRDM13Q9H4Q3 707 aa9.85□□□□□ -0.83
SDC1-206ENST00000482879 OCEL1Q9H607 264 aa9.85□□□□□ -0.83
SDC1-206ENST00000482879 SLC2A9Q9NRM0 540 aa9.85□□□□□ -0.83
SDC1-206ENST00000482879 FLVCR2Q9UPI3 526 aa9.85□□□□□ -0.83
SDC1-206ENST00000482879 PRELID3BQ9Y3B1 194 aa9.85□□□□□ -0.83
SDC1-206ENST00000482879 RNF212BA8MTL3 300 aa9.84□□□□□ -0.83
SDC1-206ENST00000482879 VGLL3A8MV65 326 aa9.84□□□□□ -0.83
SDC1-206ENST00000482879 H0YJW9 148 aa9.84□□□□□ -0.83
SDC1-206ENST00000482879 H7C2Y5 167 aa9.84□□□□□ -0.83
SDC1-206ENST00000482879 ARPC1BO15143 372 aaKnown RBP9.84□□□□□ -0.83
SDC1-206ENST00000482879 MPPED1O15442 326 aa9.84□□□□□ -0.83
SDC1-206ENST00000482879 APOA2P02652 100 aa9.84□□□□□ -0.83
SDC1-206ENST00000482879 FAM157CP0CG43 387 aa9.84□□□□□ -0.83
SDC1-206ENST00000482879 CD24P25063 80 aa9.84□□□□□ -0.83
SDC1-206ENST00000482879 CD1BP29016 333 aa9.84□□□□□ -0.83
SDC1-206ENST00000482879 MC5RP33032 325 aa9.84□□□□□ -0.83
SDC1-206ENST00000482879 DYNLT3P51808 116 aa9.84□□□□□ -0.83
SDC1-206ENST00000482879 CATR1Q13166 79 aa9.84□□□□□ -0.83
SDC1-206ENST00000482879 AANATQ16613 207 aa9.84□□□□□ -0.83
SDC1-206ENST00000482879 TUSC1Q2TAM9 212 aa9.84□□□□□ -0.83
SDC1-206ENST00000482879 TBC1D26Q86UD7 250 aa9.84□□□□□ -0.83
SDC1-206ENST00000482879 ADAD2Q8NCV1 583 aaKnown RBP9.84□□□□□ -0.83
SDC1-206ENST00000482879 CFHR4Q92496 578 aa9.84□□□□□ -0.83
SDC1-206ENST00000482879 SLC35D1Q9NTN3 355 aa9.84□□□□□ -0.83
SDC1-206ENST00000482879 TRAV6A0A075B6T7 132 aa9.83□□□□□ -0.84
SDC1-206ENST00000482879 TEX13DA0A0J9YY54 714 aaPredicted RBP9.83□□□□□ -0.84
SDC1-206ENST00000482879 FAM90A9PA6NNJ1 464 aa9.83□□□□□ -0.84
SDC1-206ENST00000482879 H3BUX3 64 aa9.83□□□□□ -0.84
SDC1-206ENST00000482879 FCGR3BO75015 233 aa9.83□□□□□ -0.84
SDC1-206ENST00000482879 VENTXO95231 258 aa9.83□□□□□ -0.84
SDC1-206ENST00000482879 IGKV1D-33P01593 117 aa9.83□□□□□ -0.84
SDC1-206ENST00000482879 IGKV1-33P01594 117 aa9.83□□□□□ -0.84
SDC1-206ENST00000482879 SNRNP70P08621 437 aaKnown RBP9.83□□□□□ -0.84
SDC1-206ENST00000482879 H2AFB2P0C5Z0 115 aa9.83□□□□□ -0.84
SDC1-206ENST00000482879 FAM106CPP0CH98 169 aa9.83□□□□□ -0.84
SDC1-206ENST00000482879 RRASP10301 218 aa9.83□□□□□ -0.84
SDC1-206ENST00000482879 AKR1C4P17516 323 aa9.83□□□□□ -0.84
SDC1-206ENST00000482879 F2RP25116 425 aa9.83□□□□□ -0.84
SDC1-206ENST00000482879 IER3P46695 156 aa9.83□□□□□ -0.84
SDC1-206ENST00000482879 TAGLNQ01995 201 aaKnown RBP9.83□□□□□ -0.84
SDC1-206ENST00000482879 HES1Q14469 280 aa9.83□□□□□ -0.84
SDC1-206ENST00000482879 HABP2Q14520 560 aaPredicted RBP9.83□□□□□ -0.84
SDC1-206ENST00000482879 RTL8BQ17RB0 113 aa9.83□□□□□ -0.84
SDC1-206ENST00000482879 OR2B11Q5JQS5 317 aa9.83□□□□□ -0.84
SDC1-206ENST00000482879 THNSL2Q86YJ6 484 aa9.83□□□□□ -0.84
SDC1-206ENST00000482879 CENPSQ8N2Z9 138 aa9.83□□□□□ -0.84
SDC1-206ENST00000482879 DUSP18Q8NEJ0 188 aa9.83□□□□□ -0.84
SDC1-206ENST00000482879 PIFOQ8TCI5 191 aa9.83□□□□□ -0.84
SDC1-206ENST00000482879 DDB2Q92466 427 aa9.83□□□□□ -0.84
SDC1-206ENST00000482879 RBMXL1Q96E39 390 aaKnown RBP9.83□□□□□ -0.84
SDC1-206ENST00000482879 C20orf85Q9H1P6 137 aa9.83□□□□□ -0.84
SDC1-206ENST00000482879 WASHC3Q9Y3C0 194 aa9.83□□□□□ -0.84
SDC1-206ENST00000482879 NUBP2Q9Y5Y2 271 aa9.83□□□□□ -0.84
SDC1-206ENST00000482879 BTBD17A6NE02 478 aa9.82□□□□□ -0.84
SDC1-206ENST00000482879 HOXA3O43365 443 aaPredicted RBP9.82□□□□□ -0.84
SDC1-206ENST00000482879 PTTG1O95997 202 aa9.82□□□□□ -0.84
SDC1-206ENST00000482879 IGHV4-59P01825 116 aa9.82□□□□□ -0.84
SDC1-206ENST00000482879 KIR2DS2P43631 304 aa9.82□□□□□ -0.84
SDC1-206ENST00000482879 TAS2R31P59538 309 aa9.82□□□□□ -0.84
SDC1-206ENST00000482879 CBX3Q13185 183 aa9.82□□□□□ -0.84
SDC1-206ENST00000482879 HNF4GQ14541 408 aa9.82□□□□□ -0.84
SDC1-206ENST00000482879 LY6EQ16553 131 aa9.82□□□□□ -0.84
SDC1-206ENST00000482879 PLET1Q6UQ28 207 aa9.82□□□□□ -0.84
SDC1-206ENST00000482879 SLC25A42Q86VD7 318 aa9.82□□□□□ -0.84
SDC1-206ENST00000482879 PDPNQ86YL7 162 aa9.82□□□□□ -0.84
SDC1-206ENST00000482879 SGPP2Q8IWX5 399 aa9.82□□□□□ -0.84
SDC1-206ENST00000482879 SPAG16Q8N0X2 631 aa9.82□□□□□ -0.84
SDC1-206ENST00000482879 OR2T10Q8NGZ9 312 aa9.82□□□□□ -0.84
SDC1-206ENST00000482879 OR5R1Q8NH85 324 aa9.82□□□□□ -0.84
SDC1-206ENST00000482879 ZNF418Q8TF45 676 aaPredicted RBP9.82□□□□□ -0.84
SDC1-206ENST00000482879 SSMEM1Q8WWF3 244 aa9.82□□□□□ -0.84
SDC1-206ENST00000482879 TMEM230Q96A57 120 aa9.82□□□□□ -0.84
SDC1-206ENST00000482879 EAF1Q96JC9 268 aaPredicted RBP9.82□□□□□ -0.84
SDC1-206ENST00000482879 NAA60Q9H7X0 242 aa9.82□□□□□ -0.84
SDC1-206ENST00000482879 TNFRSF19Q9NS68 423 aa9.82□□□□□ -0.84
SDC1-206ENST00000482879 LIN7CQ9NUP9 197 aaKnown RBP9.82□□□□□ -0.84
SDC1-206ENST00000482879 NUDT15Q9NV35 164 aa9.82□□□□□ -0.84
SDC1-206ENST00000482879 C3orf85A0A1B0GTC6 90 aa9.81□□□□□ -0.84
SDC1-206ENST00000482879 CRYM-AS1A6NIL9 109 aa9.81□□□□□ -0.84
SDC1-206ENST00000482879 PLXNB1O43157 2135 aa9.81□□□□□ -0.84
SDC1-206ENST00000482879 CRYZL1O95825 349 aa9.81□□□□□ -0.84
SDC1-206ENST00000482879 MOSP00540 346 aa9.81□□□□□ -0.84
SDC1-206ENST00000482879 SPNP16150 400 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms