RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 FAM131AQ6UXB0 335 aa13.17□□□□□ -0.3
RXRB-203ENST00000481441 C5orf24Q7Z6I8 188 aa13.17□□□□□ -0.3
RXRB-203ENST00000481441 S100A13Q99584 98 aa13.17□□□□□ -0.3
RXRB-203ENST00000481441 TMEM138Q9NPI0 162 aa13.17□□□□□ -0.3
RXRB-203ENST00000481441 JPT1Q9UK76 154 aa13.17□□□□□ -0.3
RXRB-203ENST00000481441 LY6G6CO95867 125 aa13.16□□□□□ -0.3
RXRB-203ENST00000481441 MYL9P24844 172 aa13.16□□□□□ -0.3
RXRB-203ENST00000481441 CD40LGP29965 261 aa13.16□□□□□ -0.3
RXRB-203ENST00000481441 SDC2P34741 201 aa13.16□□□□□ -0.3
RXRB-203ENST00000481441 RAB12Q6IQ22 244 aa13.16□□□□□ -0.3
RXRB-203ENST00000481441 Q8N402 240 aa13.16□□□□□ -0.3
RXRB-203ENST00000481441 MRPS24Q96EL2 167 aaKnown RBP13.16□□□□□ -0.3
RXRB-203ENST00000481441 DCSTAMPQ9H295 470 aa13.16□□□□□ -0.3
RXRB-203ENST00000481441 PLEKHA3Q9HB20 300 aa13.16□□□□□ -0.3
RXRB-203ENST00000481441 MBNL3Q9NUK0 354 aaKnown RBP13.16□□□□□ -0.3
RXRB-203ENST00000481441 SIGLEC8Q9NYZ4 499 aa13.16□□□□□ -0.3
RXRB-203ENST00000481441 TRAV1-2A0A0B4J238 106 aa13.15□□□□□ -0.3
RXRB-203ENST00000481441 ANKRD34BA5PLL1 514 aa13.15□□□□□ -0.3
RXRB-203ENST00000481441 YPEL1O60688 119 aa13.15□□□□□ -0.3
RXRB-203ENST00000481441 CA11O75493 328 aa13.15□□□□□ -0.3
RXRB-203ENST00000481441 CSN3P07498 182 aa13.15□□□□□ -0.3
RXRB-203ENST00000481441 CLEC2LP0C7M8 214 aa13.15□□□□□ -0.3
RXRB-203ENST00000481441 SNRPBP14678 240 aaKnown RBP13.15□□□□□ -0.3
RXRB-203ENST00000481441 IGFBP3P17936 291 aaPredicted RBP13.15□□□□□ -0.3
RXRB-203ENST00000481441 SRMP19623 302 aa13.15□□□□□ -0.3
RXRB-203ENST00000481441 FSTP19883 344 aa13.15□□□□□ -0.3
RXRB-203ENST00000481441 SYNJ2BPP57105 145 aa13.15□□□□□ -0.3
RXRB-203ENST00000481441 HTD2P86397 168 aa13.15□□□□□ -0.3
RXRB-203ENST00000481441 MXD1Q05195 221 aa13.15□□□□□ -0.3
RXRB-203ENST00000481441 PLGLAQ15195 96 aa13.15□□□□□ -0.3
RXRB-203ENST00000481441 LY6G6FQ5SQ64 297 aa13.15□□□□□ -0.3
RXRB-203ENST00000481441 DDB2Q92466 427 aa13.15□□□□□ -0.3
RXRB-203ENST00000481441 CYYR1Q96J86 154 aa13.15□□□□□ -0.3
RXRB-203ENST00000481441 YPEL2Q96QA6 119 aa13.15□□□□□ -0.3
RXRB-203ENST00000481441 IFI27L2Q9H2X8 130 aa13.15□□□□□ -0.3
RXRB-203ENST00000481441 CKLFQ9UBR5 152 aa13.15□□□□□ -0.3
RXRB-203ENST00000481441 SMIM30A4D0T7 59 aa13.14□□□□□ -0.31
RXRB-203ENST00000481441 BRI3O95415 125 aa13.14□□□□□ -0.31
RXRB-203ENST00000481441 RPS19P39019 145 aaKnown RBP13.14□□□□□ -0.31
RXRB-203ENST00000481441 MECP2P51608 486 aaKnown RBP13.14□□□□□ -0.31
RXRB-203ENST00000481441 MOGAT2Q3SYC2 334 aa13.14□□□□□ -0.31
RXRB-203ENST00000481441 ZNF562Q6V9R5 426 aa13.14□□□□□ -0.31
RXRB-203ENST00000481441 ZNF554Q86TJ5 538 aa13.14□□□□□ -0.31
RXRB-203ENST00000481441 LRRTM1Q86UE6 522 aa13.14□□□□□ -0.31
RXRB-203ENST00000481441 ADAM30Q9UKF2 790 aa13.14□□□□□ -0.31
RXRB-203ENST00000481441 PEX16Q9Y5Y5 336 aa13.14□□□□□ -0.31
RXRB-203ENST00000481441 C13orf42A0A1B0GVH6 325 aa13.13□□□□□ -0.31
RXRB-203ENST00000481441 MAS1P04201 325 aa13.13□□□□□ -0.31
RXRB-203ENST00000481441 CT45A6P0DMU7 189 aa13.13□□□□□ -0.31
RXRB-203ENST00000481441 CT45A5P0DMU8 189 aa13.13□□□□□ -0.31
RXRB-203ENST00000481441 CT45A7P0DMV0 189 aa13.13□□□□□ -0.31
RXRB-203ENST00000481441 BDKRB2P30411 391 aa13.13□□□□□ -0.31
RXRB-203ENST00000481441 PPP3R1P63098 170 aa13.13□□□□□ -0.31
RXRB-203ENST00000481441 GPR176Q14439 515 aa13.13□□□□□ -0.31
RXRB-203ENST00000481441 CNPY1Q3B7I2 92 aa13.13□□□□□ -0.31
RXRB-203ENST00000481441 FAM71F2Q6NXP2 309 aa13.13□□□□□ -0.31
RXRB-203ENST00000481441 CLCC1Q96S66 551 aa13.13□□□□□ -0.31
RXRB-203ENST00000481441 DCUN1D5Q9BTE7 237 aa13.13□□□□□ -0.31
RXRB-203ENST00000481441 KCNIP1Q9NZI2 227 aa13.13□□□□□ -0.31
RXRB-203ENST00000481441 AK6Q9Y3D8 172 aaKnown RBP13.13□□□□□ -0.31
RXRB-203ENST00000481441 OR5H14A6NHG9 310 aa13.13□□□□□ -0.31
RXRB-203ENST00000481441 CA2P00918 260 aa13.13□□□□□ -0.31
RXRB-203ENST00000481441 OR10A3P58181 314 aa13.13□□□□□ -0.31
RXRB-203ENST00000481441 CD81P60033 236 aa13.13□□□□□ -0.31
RXRB-203ENST00000481441 GLDNQ6ZMI3 551 aaPredicted RBP13.13□□□□□ -0.31
RXRB-203ENST00000481441 TPRA1Q86W33 373 aa13.13□□□□□ -0.31
RXRB-203ENST00000481441 NR2C2APQ86WQ0 139 aa13.13□□□□□ -0.31
RXRB-203ENST00000481441 POC5Q8NA72 575 aa13.13□□□□□ -0.31
RXRB-203ENST00000481441 OR2AK2Q8NG84 335 aa13.13□□□□□ -0.31
RXRB-203ENST00000481441 DYNC2LI1Q8TCX1 351 aa13.13□□□□□ -0.31
RXRB-203ENST00000481441 GFI1Q99684 422 aa13.13□□□□□ -0.31
RXRB-203ENST00000481441 ZNF355PQ9NSJ1 428 aa13.13□□□□□ -0.31
RXRB-203ENST00000481441 METTL1Q9UBP6 276 aaKnown RBP13.13□□□□□ -0.31
RXRB-203ENST00000481441 A0A0G2JLM5 398 aa13.12□□□□□ -0.31
RXRB-203ENST00000481441 UBE2QL1A1L167 161 aa13.12□□□□□ -0.31
RXRB-203ENST00000481441 H0YJW9 148 aa13.12□□□□□ -0.31
RXRB-203ENST00000481441 H3BUA1 57 aa13.12□□□□□ -0.31
RXRB-203ENST00000481441 RBBP9O75884 186 aa13.12□□□□□ -0.31
RXRB-203ENST00000481441 GSTP1P09211 210 aaKnown RBP13.12□□□□□ -0.31
RXRB-203ENST00000481441 ZNF182P17025 639 aaPredicted RBP13.12□□□□□ -0.31
RXRB-203ENST00000481441 RAB3BP20337 219 aa13.12□□□□□ -0.31
RXRB-203ENST00000481441 MC5RP33032 325 aa13.12□□□□□ -0.31
RXRB-203ENST00000481441 RPL39P5Q59GN2 51 aa13.12□□□□□ -0.31
RXRB-203ENST00000481441 MRPL30Q8TCC3 161 aaKnown RBP13.12□□□□□ -0.31
RXRB-203ENST00000481441 NEURL2Q9BR09 285 aa13.12□□□□□ -0.31
RXRB-203ENST00000481441 ST6GALNAC5Q9BVH7 336 aa13.12□□□□□ -0.31
RXRB-203ENST00000481441 FAM90A7PA6NKC0 464 aa13.11□□□□□ -0.31
RXRB-203ENST00000481441 FAM90A23PA8MXZ1 464 aa13.11□□□□□ -0.31
RXRB-203ENST00000481441 PDCD5O14737 125 aa13.11□□□□□ -0.31
RXRB-203ENST00000481441 ST8SIA5O15466 376 aa13.11□□□□□ -0.31
RXRB-203ENST00000481441 TPPPO94811 219 aa13.11□□□□□ -0.31
RXRB-203ENST00000481441 TRBV12-3P01733 135 aa13.11□□□□□ -0.31
RXRB-203ENST00000481441 GLAP06280 429 aa13.11□□□□□ -0.31
RXRB-203ENST00000481441 PSG5Q15238 335 aa13.11□□□□□ -0.31
RXRB-203ENST00000481441 SIGIRRQ6IA17 410 aa13.11□□□□□ -0.31
RXRB-203ENST00000481441 LAX1Q8IWV1 398 aa13.11□□□□□ -0.31
RXRB-203ENST00000481441 DEFB125Q8N687 156 aa13.11□□□□□ -0.31
RXRB-203ENST00000481441 OR5T1Q8NG75 326 aa13.11□□□□□ -0.31
RXRB-203ENST00000481441 OR5AN1Q8NGI8 311 aa13.11□□□□□ -0.31
RXRB-203ENST00000481441 OR2K2Q8NGT1 345 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms