RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 PROP1O75360 226 aa9.39□□□□□ -0.91
SQSTM1-207ENST00000481335 BRI3O95415 125 aa9.39□□□□□ -0.91
SQSTM1-207ENST00000481335 CA2P00918 260 aa9.39□□□□□ -0.91
SQSTM1-207ENST00000481335 IGKV1-16P04430 117 aa9.39□□□□□ -0.91
SQSTM1-207ENST00000481335 FCGR3AP08637 254 aa9.39□□□□□ -0.91
SQSTM1-207ENST00000481335 OR8U9P0C7N5 309 aa9.39□□□□□ -0.91
SQSTM1-207ENST00000481335 RRASP10301 218 aa9.39□□□□□ -0.91
SQSTM1-207ENST00000481335 EGR2P11161 476 aaPredicted RBP9.39□□□□□ -0.91
SQSTM1-207ENST00000481335 CLDN12P56749 244 aa9.39□□□□□ -0.91
SQSTM1-207ENST00000481335 GABARAPL2P60520 117 aa9.39□□□□□ -0.91
SQSTM1-207ENST00000481335 CBX3Q13185 183 aa9.39□□□□□ -0.91
SQSTM1-207ENST00000481335 MOGAT2Q3SYC2 334 aa9.39□□□□□ -0.91
SQSTM1-207ENST00000481335 UNQ5815/PRO19632Q6UWF5 114 aa9.39□□□□□ -0.91
SQSTM1-207ENST00000481335 ZNF383Q8NA42 475 aa9.39□□□□□ -0.91
SQSTM1-207ENST00000481335 OR6Q1Q8NGQ2 317 aa9.39□□□□□ -0.91
SQSTM1-207ENST00000481335 OR10R2Q8NGX6 335 aa9.39□□□□□ -0.91
SQSTM1-207ENST00000481335 OR10J5Q8NHC4 309 aa9.39□□□□□ -0.91
SQSTM1-207ENST00000481335 ABHD5Q8WTS1 349 aa9.39□□□□□ -0.91
SQSTM1-207ENST00000481335 DCUN1D4Q92564 292 aa9.39□□□□□ -0.91
SQSTM1-207ENST00000481335 PRR25Q96S07 402 aa9.39□□□□□ -0.91
SQSTM1-207ENST00000481335 TPSG1Q9NRR2 321 aa9.39□□□□□ -0.91
SQSTM1-207ENST00000481335 SMAD5-AS1Q9Y6J3 95 aa9.39□□□□□ -0.91
SQSTM1-207ENST00000481335 U3KQK5 164 aa9.39□□□□□ -0.91
SQSTM1-207ENST00000481335 TNCP24821 2201 aa9.38□□□□□ -0.91
SQSTM1-207ENST00000481335 TRBV6-7A0A0A0MS04 114 aa9.38□□□□□ -0.91
SQSTM1-207ENST00000481335 TRDV1A0A1B0GX56 115 aa9.38□□□□□ -0.91
SQSTM1-207ENST00000481335 MFNGO00587 321 aa9.38□□□□□ -0.91
SQSTM1-207ENST00000481335 HSPB1P04792 205 aaKnown RBP9.38□□□□□ -0.91
SQSTM1-207ENST00000481335 HIST1H1DP16402 221 aaKnown RBP9.38□□□□□ -0.91
SQSTM1-207ENST00000481335 RAB3BP20337 219 aa9.38□□□□□ -0.91
SQSTM1-207ENST00000481335 RPS16P62249 146 aaKnown RBP9.38□□□□□ -0.91
SQSTM1-207ENST00000481335 SSX1Q16384 188 aa9.38□□□□□ -0.91
SQSTM1-207ENST00000481335 ACSM6Q6P461 480 aa9.38□□□□□ -0.91
SQSTM1-207ENST00000481335 IZUMO2Q6UXV1 221 aa9.38□□□□□ -0.91
SQSTM1-207ENST00000481335 LFNGQ8NES3 379 aa9.38□□□□□ -0.91
SQSTM1-207ENST00000481335 ADTRPQ96IZ2 230 aa9.38□□□□□ -0.91
SQSTM1-207ENST00000481335 SLC35D1Q9NTN3 355 aa9.38□□□□□ -0.91
SQSTM1-207ENST00000481335 RAB26Q9ULW5 256 aa9.38□□□□□ -0.91
SQSTM1-207ENST00000481335 KCNK7Q9Y2U2 307 aa9.38□□□□□ -0.91
SQSTM1-207ENST00000481335 A0A0G2JLM5 398 aa9.37□□□□□ -0.91
SQSTM1-207ENST00000481335 M0R1X1 148 aa9.37□□□□□ -0.91
SQSTM1-207ENST00000481335 RAB27BO00194 218 aa9.37□□□□□ -0.91
SQSTM1-207ENST00000481335 FCN1O00602 326 aa9.37□□□□□ -0.91
SQSTM1-207ENST00000481335 SAP30O75446 220 aa9.37□□□□□ -0.91
SQSTM1-207ENST00000481335 SCGNO76038 276 aa9.37□□□□□ -0.91
SQSTM1-207ENST00000481335 DTYMKP23919 212 aa9.37□□□□□ -0.91
SQSTM1-207ENST00000481335 MAP2K4P45985 399 aa9.37□□□□□ -0.91
SQSTM1-207ENST00000481335 TPPP2P59282 170 aa9.37□□□□□ -0.91
SQSTM1-207ENST00000481335 PITPNAQ00169 270 aa9.37□□□□□ -0.91
SQSTM1-207ENST00000481335 FXYD3Q14802 87 aa9.37□□□□□ -0.91
SQSTM1-207ENST00000481335 RTL8BQ17RB0 113 aa9.37□□□□□ -0.91
SQSTM1-207ENST00000481335 TMEM177Q53S58 311 aa9.37□□□□□ -0.91
SQSTM1-207ENST00000481335 HES5Q5TA89 166 aa9.37□□□□□ -0.91
SQSTM1-207ENST00000481335 POC5Q8NA72 575 aa9.37□□□□□ -0.91
SQSTM1-207ENST00000481335 DLX4Q92988 240 aaPredicted RBP9.37□□□□□ -0.91
SQSTM1-207ENST00000481335 RHOVQ96L33 236 aa9.37□□□□□ -0.91
SQSTM1-207ENST00000481335 CNBD2Q96M20 576 aa9.37□□□□□ -0.91
SQSTM1-207ENST00000481335 HARBI1Q96MB7 349 aa9.37□□□□□ -0.91
SQSTM1-207ENST00000481335 OR5B12Q96R08 314 aa9.37□□□□□ -0.91
SQSTM1-207ENST00000481335 OR2D2Q9H210 308 aa9.37□□□□□ -0.91
SQSTM1-207ENST00000481335 SDHAF2Q9NX18 166 aa9.37□□□□□ -0.91
SQSTM1-207ENST00000481335 A3GALT2U3KPV4 340 aa9.37□□□□□ -0.91
SQSTM1-207ENST00000481335 IGHV4OR15-8A0A075B7B6 117 aa9.36□□□□□ -0.91
SQSTM1-207ENST00000481335 A0A087WW49 117 aa9.36□□□□□ -0.91
SQSTM1-207ENST00000481335 BET1O15155 118 aa9.36□□□□□ -0.91
SQSTM1-207ENST00000481335 SLC25A17O43808 307 aa9.36□□□□□ -0.91
SQSTM1-207ENST00000481335 CREBL2O60519 120 aaPredicted RBP9.36□□□□□ -0.91
SQSTM1-207ENST00000481335 LY86O95711 162 aa9.36□□□□□ -0.91
SQSTM1-207ENST00000481335 TRGV3P03979 118 aa9.36□□□□□ -0.91
SQSTM1-207ENST00000481335 ZP3P21754 424 aa9.36□□□□□ -0.91
SQSTM1-207ENST00000481335 DRAXINQ8NBI3 349 aaPredicted RBP9.36□□□□□ -0.91
SQSTM1-207ENST00000481335 FCGR1BQ92637 280 aa9.36□□□□□ -0.91
SQSTM1-207ENST00000481335 GINS4Q9BRT9 223 aa9.36□□□□□ -0.91
SQSTM1-207ENST00000481335 FAM103A1Q9BTL3 118 aaKnown RBP9.36□□□□□ -0.91
SQSTM1-207ENST00000481335 ELOVL1Q9BW60 279 aa9.36□□□□□ -0.91
SQSTM1-207ENST00000481335 RANGRFQ9HD47 186 aaPredicted RBP9.36□□□□□ -0.91
SQSTM1-207ENST00000481335 SLC22A5O76082 557 aa9.35□□□□□ -0.91
SQSTM1-207ENST00000481335 CNIH1O95406 144 aa9.35□□□□□ -0.91
SQSTM1-207ENST00000481335 IGLV2-23P01705 113 aa9.35□□□□□ -0.91
SQSTM1-207ENST00000481335 CRYGBP07316 175 aa9.35□□□□□ -0.91
SQSTM1-207ENST00000481335 CTXN2P0C2S0 81 aa9.35□□□□□ -0.91
SQSTM1-207ENST00000481335 GSTT2P0CG29 244 aa9.35□□□□□ -0.91
SQSTM1-207ENST00000481335 GSTT2BP0CG30 244 aa9.35□□□□□ -0.91
SQSTM1-207ENST00000481335 GNB3P16520 340 aa9.35□□□□□ -0.91
SQSTM1-207ENST00000481335 AADACP22760 399 aa9.35□□□□□ -0.91
SQSTM1-207ENST00000481335 FGF9P31371 208 aaPredicted RBP9.35□□□□□ -0.91
SQSTM1-207ENST00000481335 TALDO1P37837 337 aa9.35□□□□□ -0.91
SQSTM1-207ENST00000481335 SLURP1P55000 103 aa9.35□□□□□ -0.91
SQSTM1-207ENST00000481335 ARFRP1Q13795 201 aa9.35□□□□□ -0.91
SQSTM1-207ENST00000481335 IGSF11Q5DX21 431 aa9.35□□□□□ -0.91
SQSTM1-207ENST00000481335 UBE2UQ5VVX9 321 aa9.35□□□□□ -0.91
SQSTM1-207ENST00000481335 TEX45Q8NA69 505 aa9.35□□□□□ -0.91
SQSTM1-207ENST00000481335 OSR1Q8TAX0 266 aaPredicted RBP9.35□□□□□ -0.91
SQSTM1-207ENST00000481335 OR4C12Q96R67 309 aa9.35□□□□□ -0.91
SQSTM1-207ENST00000481335 CLCC1Q96S66 551 aa9.35□□□□□ -0.91
SQSTM1-207ENST00000481335 ALX4Q9H161 411 aaPredicted RBP9.35□□□□□ -0.91
SQSTM1-207ENST00000481335 STUB1Q9UNE7 303 aa9.35□□□□□ -0.91
SQSTM1-207ENST00000481335 RBM7Q9Y580 266 aaKnown RBP9.35□□□□□ -0.91
SQSTM1-207ENST00000481335 C13orf42A0A1B0GVH6 325 aa9.34□□□□□ -0.91
SQSTM1-207ENST00000481335 SHISA3A0PJX4 238 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms