RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 IGKV1-27A0A075B6S5 117 aa16.2■□□□□ 0.18
CCM2-214ENST00000481194 PDPNQ86YL7 162 aa16.2■□□□□ 0.18
CCM2-214ENST00000481194 PNKDQ8N490 385 aa16.2■□□□□ 0.18
CCM2-214ENST00000481194 OR4F17Q8NGA8 305 aa16.2■□□□□ 0.18
CCM2-214ENST00000481194 NDFIP1Q9BT67 221 aa16.2■□□□□ 0.18
CCM2-214ENST00000481194 METTL1Q9UBP6 276 aaKnown RBP16.2■□□□□ 0.18
CCM2-214ENST00000481194 OR2A4O95047 310 aa16.19■□□□□ 0.18
CCM2-214ENST00000481194 OR13C7P0DN81 318 aa16.19■□□□□ 0.18
CCM2-214ENST00000481194 LRP11Q86VZ4 500 aa16.19■□□□□ 0.18
CCM2-214ENST00000481194 OSR1Q8TAX0 266 aaPredicted RBP16.19■□□□□ 0.18
CCM2-214ENST00000481194 OR2A7Q96R45 310 aa16.19■□□□□ 0.18
CCM2-214ENST00000481194 TMEM140Q9NV12 185 aa16.19■□□□□ 0.18
CCM2-214ENST00000481194 OPN1MWP04001 364 aa16.19■□□□□ 0.18
CCM2-214ENST00000481194 OPN1MW2P0DN77 364 aa16.19■□□□□ 0.18
CCM2-214ENST00000481194 OPN1MW3P0DN78 364 aa16.19■□□□□ 0.18
CCM2-214ENST00000481194 DCAF12L2Q5VW00 463 aa16.19■□□□□ 0.18
CCM2-214ENST00000481194 GPR146Q96CH1 333 aa16.19■□□□□ 0.18
CCM2-214ENST00000481194 A0A0A6YYD4 124 aa16.19■□□□□ 0.18
CCM2-214ENST00000481194 FAM157AC9JC47 383 aa16.19■□□□□ 0.18
CCM2-214ENST00000481194 RPL7L1Q6DKI1 246 aaKnown RBP16.19■□□□□ 0.18
CCM2-214ENST00000481194 HILPDAQ9Y5L2 63 aa16.19■□□□□ 0.18
CCM2-214ENST00000481194 WSB1Q9Y6I7 421 aa16.19■□□□□ 0.18
CCM2-214ENST00000481194 RP1L1Q8IWN7 2480 aaPredicted RBP16.19■□□□□ 0.18
CCM2-214ENST00000481194 RAB19A4D1S5 217 aa16.19■□□□□ 0.18
CCM2-214ENST00000481194 CDC34P49427 236 aaPredicted RBP16.19■□□□□ 0.18
CCM2-214ENST00000481194 TCEAL7Q9BRU2 100 aa16.19■□□□□ 0.18
CCM2-214ENST00000481194 IL36RNQ9UBH0 155 aa16.19■□□□□ 0.18
CCM2-214ENST00000481194 TRBV6-6A0A0A6YYG2 114 aa16.18■□□□□ 0.18
CCM2-214ENST00000481194 IGLV1-44P01699 117 aa16.18■□□□□ 0.18
CCM2-214ENST00000481194 HAGHQ16775 308 aa16.18■□□□□ 0.18
CCM2-214ENST00000481194 MARCH11A6NNE9 402 aa16.18■□□□□ 0.18
CCM2-214ENST00000481194 HLA-GP17693 338 aa16.18■□□□□ 0.18
CCM2-214ENST00000481194 FAM201AQ5SY85 155 aa16.18■□□□□ 0.18
CCM2-214ENST00000481194 FRZBQ92765 325 aa16.18■□□□□ 0.18
CCM2-214ENST00000481194 MPDU1O75352 247 aa16.18■□□□□ 0.18
CCM2-214ENST00000481194 OR2T10Q8NGZ9 312 aa16.18■□□□□ 0.18
CCM2-214ENST00000481194 TNFRSF14Q92956 283 aa16.18■□□□□ 0.18
CCM2-214ENST00000481194 A1L4Q6 167 aa16.18■□□□□ 0.18
CCM2-214ENST00000481194 FBP1P09467 338 aa16.18■□□□□ 0.18
CCM2-214ENST00000481194 HSPE1P61604 102 aaKnown RBP16.18■□□□□ 0.18
CCM2-214ENST00000481194 DPRXA6NFQ7 191 aa16.17■□□□□ 0.18
CCM2-214ENST00000481194 OR10G4Q8NGN3 311 aa16.17■□□□□ 0.18
CCM2-214ENST00000481194 OR10G9Q8NGN4 311 aa16.17■□□□□ 0.18
CCM2-214ENST00000481194 OR10G7Q8NGN6 311 aa16.17■□□□□ 0.18
CCM2-214ENST00000481194 DPM3Q9P2X0 92 aa16.17■□□□□ 0.18
CCM2-214ENST00000481194 TOX4O94842 621 aa16.17■□□□□ 0.18
CCM2-214ENST00000481194 SEC11BP0C7V7 166 aa16.17■□□□□ 0.18
CCM2-214ENST00000481194 A0A0U1RQK1 487 aa16.17■□□□□ 0.18
CCM2-214ENST00000481194 CT45A10P0DMU9 189 aa16.17■□□□□ 0.18
CCM2-214ENST00000481194 SMIM15Q7Z3B0 74 aa16.17■□□□□ 0.18
CCM2-214ENST00000481194 OR4A5Q8NH83 315 aa16.17■□□□□ 0.18
CCM2-214ENST00000481194 CABLES2Q9BTV7 478 aa16.17■□□□□ 0.18
CCM2-214ENST00000481194 CHRDL1Q9BU40 450 aa16.17■□□□□ 0.18
CCM2-214ENST00000481194 MAP1LC3B2A6NCE7 125 aa16.17■□□□□ 0.18
CCM2-214ENST00000481194 UCP1P25874 307 aa16.17■□□□□ 0.18
CCM2-214ENST00000481194 QRFPP83859 136 aa16.17■□□□□ 0.18
CCM2-214ENST00000481194 HGFACQ04756 655 aa16.17■□□□□ 0.18
CCM2-214ENST00000481194 PJVKQ0ZLH3 352 aa16.17■□□□□ 0.18
CCM2-214ENST00000481194 BTNL8Q6UX41 500 aa16.17■□□□□ 0.18
CCM2-214ENST00000481194 MAP1LC3BQ9GZQ8 125 aa16.17■□□□□ 0.18
CCM2-214ENST00000481194 TMEM178BH3BS89 294 aa16.16■□□□□ 0.18
CCM2-214ENST00000481194 CDKN1AP38936 164 aa16.16■□□□□ 0.18
CCM2-214ENST00000481194 LRP4O75096 1905 aa16.16■□□□□ 0.18
CCM2-214ENST00000481194 GNG7O60262 68 aa16.16■□□□□ 0.18
CCM2-214ENST00000481194 AKR1C3P42330 323 aa16.16■□□□□ 0.18
CCM2-214ENST00000481194 TEPPQ6URK8 271 aa16.16■□□□□ 0.18
CCM2-214ENST00000481194 AAMDCQ9H7C9 122 aa16.16■□□□□ 0.18
CCM2-214ENST00000481194 CACNA1HO95180 2353 aa16.16■□□□□ 0.18
CCM2-214ENST00000481194 ADIRFQ15847 76 aa16.16■□□□□ 0.18
CCM2-214ENST00000481194 RBKSQ9H477 322 aa16.16■□□□□ 0.18
CCM2-214ENST00000481194 IFT22Q9H7X7 185 aa16.16■□□□□ 0.18
CCM2-214ENST00000481194 SIRT7Q9NRC8 400 aa16.16■□□□□ 0.18
CCM2-214ENST00000481194 TMEM167BQ9NRX6 74 aa16.16■□□□□ 0.18
CCM2-214ENST00000481194 RCC2Q9P258 522 aaKnown RBP16.16■□□□□ 0.18
CCM2-214ENST00000481194 PERPQ96FX8 193 aa16.16■□□□□ 0.18
CCM2-214ENST00000481194 TMUB1Q9BVT8 246 aa16.16■□□□□ 0.18
CCM2-214ENST00000481194 TECRQ9NZ01 308 aaKnown RBP16.16■□□□□ 0.18
CCM2-214ENST00000481194 LYRM2Q9NU23 88 aaPredicted RBP16.15■□□□□ 0.18
CCM2-214ENST00000481194 S1PR2O95136 353 aa16.15■□□□□ 0.18
CCM2-214ENST00000481194 ADIPOQQ15848 244 aa16.15■□□□□ 0.18
CCM2-214ENST00000481194 TMEM41BQ5BJD5 291 aa16.15■□□□□ 0.18
CCM2-214ENST00000481194 SMCO4Q9NRQ5 59 aa16.15■□□□□ 0.18
CCM2-214ENST00000481194 OR10J4P0C629 311 aa16.15■□□□□ 0.18
CCM2-214ENST00000481194 CNN1P51911 297 aaKnown RBP16.15■□□□□ 0.18
CCM2-214ENST00000481194 LGALSLQ3ZCW2 172 aaPredicted RBP16.15■□□□□ 0.18
CCM2-214ENST00000481194 SMIM8Q96KF7 97 aa16.15■□□□□ 0.18
CCM2-214ENST00000481194 MANBALQ9NQG1 85 aa16.15■□□□□ 0.18
CCM2-214ENST00000481194 C5orf63A6NC05 138 aa16.15■□□□□ 0.18
CCM2-214ENST00000481194 TNFRSF9Q07011 255 aa16.15■□□□□ 0.18
CCM2-214ENST00000481194 SVILO95425 2214 aa16.15■□□□□ 0.18
CCM2-214ENST00000481194 FREM3P0C091 2139 aa16.15■□□□□ 0.18
CCM2-214ENST00000481194 DNM1P46Q6ZS02 220 aa16.15■□□□□ 0.18
CCM2-214ENST00000481194 AQP10Q96PS8 301 aa16.15■□□□□ 0.18
CCM2-214ENST00000481194 CD8AP01732 235 aa16.14■□□□□ 0.17
CCM2-214ENST00000481194 Q8WTZ3 238 aa16.14■□□□□ 0.17
CCM2-214ENST00000481194 RTBDNQ9BSG5 229 aaPredicted RBP16.14■□□□□ 0.17
CCM2-214ENST00000481194 MGST1P10620 155 aaKnown RBP16.14■□□□□ 0.17
CCM2-214ENST00000481194 Q6ZS49 121 aa16.14■□□□□ 0.17
CCM2-214ENST00000481194 ZNF727A8MUV8 499 aa16.14■□□□□ 0.17
CCM2-214ENST00000481194 HSBP1L1C9JCN9 74 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms