RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 MEX3AA1L020 520 aaKnown RBP9.04□□□□□ -0.96
VTI1A-204ENST00000480057 LINC00862A6NCI5 91 aa9.04□□□□□ -0.96
VTI1A-204ENST00000480057 KIAA1324LA8MWY0 1029 aaPredicted RBP9.04□□□□□ -0.96
VTI1A-204ENST00000480057 LYNX1G3V0Z9 82 aa9.04□□□□□ -0.96
VTI1A-204ENST00000480057 OVOL3O00110 214 aa9.04□□□□□ -0.96
VTI1A-204ENST00000480057 WRBO00258 174 aa9.04□□□□□ -0.96
VTI1A-204ENST00000480057 PPIHO43447 177 aaKnown RBP9.04□□□□□ -0.96
VTI1A-204ENST00000480057 RAMP3O60896 148 aa9.04□□□□□ -0.96
VTI1A-204ENST00000480057 MED6O75586 246 aa9.04□□□□□ -0.96
VTI1A-204ENST00000480057 MMP23AO75900 390 aa9.04□□□□□ -0.96
VTI1A-204ENST00000480057 JTBO76095 146 aa9.04□□□□□ -0.96
VTI1A-204ENST00000480057 S1PR2O95136 353 aa9.04□□□□□ -0.96
VTI1A-204ENST00000480057 SAA2P0DJI9 122 aaPredicted RBP9.04□□□□□ -0.96
VTI1A-204ENST00000480057 LYNX1P0DP58 116 aa9.04□□□□□ -0.96
VTI1A-204ENST00000480057 ZNF137PP52743 207 aa9.04□□□□□ -0.96
VTI1A-204ENST00000480057 BAXQ07812 192 aa9.04□□□□□ -0.96
VTI1A-204ENST00000480057 AARDQ4LEZ3 155 aa9.04□□□□□ -0.96
VTI1A-204ENST00000480057 CXorf66Q5JRM2 361 aaPredicted RBP9.04□□□□□ -0.96
VTI1A-204ENST00000480057 WDR25Q64LD2 544 aaPredicted RBP9.04□□□□□ -0.96
VTI1A-204ENST00000480057 NCR3LG1Q68D85 454 aa9.04□□□□□ -0.96
VTI1A-204ENST00000480057 DHRS7BQ6IAN0 325 aaPredicted RBP9.04□□□□□ -0.96
VTI1A-204ENST00000480057 EIF5AL1Q6IS14 154 aaKnown RBP9.04□□□□□ -0.96
VTI1A-204ENST00000480057 ZNF833PQ6ZTB9 187 aa9.04□□□□□ -0.96
VTI1A-204ENST00000480057 OR2C3Q8N628 320 aa9.04□□□□□ -0.96
VTI1A-204ENST00000480057 OR4S2Q8NH73 311 aa9.04□□□□□ -0.96
VTI1A-204ENST00000480057 LRRC20Q8TCA0 184 aa9.04□□□□□ -0.96
VTI1A-204ENST00000480057 SLC25A32Q9H2D1 315 aa9.04□□□□□ -0.96
VTI1A-204ENST00000480057 PATZ1Q9HBE1 687 aaKnown RBP9.04□□□□□ -0.96
VTI1A-204ENST00000480057 ZC4H2Q9NQZ6 224 aa9.04□□□□□ -0.96
VTI1A-204ENST00000480057 CYTL1Q9NRR1 136 aa9.04□□□□□ -0.96
VTI1A-204ENST00000480057 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.04□□□□□ -0.96
VTI1A-204ENST00000480057 WSB1Q9Y6I7 421 aa9.04□□□□□ -0.96
VTI1A-204ENST00000480057 SESN1Q9Y6P5 492 aa9.04□□□□□ -0.96
VTI1A-204ENST00000480057 PKDREJQ9NTG1 2253 aa9.04□□□□□ -0.96
VTI1A-204ENST00000480057 ROS1P08922 2347 aa9.04□□□□□ -0.96
VTI1A-204ENST00000480057 RPS10-NUDT3A0A1W2PQS6 291 aa9.03□□□□□ -0.96
VTI1A-204ENST00000480057 SPDEFO95238 335 aa9.03□□□□□ -0.96
VTI1A-204ENST00000480057 IGHV1-8P0DP01 117 aa9.03□□□□□ -0.96
VTI1A-204ENST00000480057 RRASP10301 218 aa9.03□□□□□ -0.96
VTI1A-204ENST00000480057 NQO2P16083 231 aa9.03□□□□□ -0.96
VTI1A-204ENST00000480057 CCL3L1P16619 93 aa9.03□□□□□ -0.96
VTI1A-204ENST00000480057 EPHA1P21709 976 aa9.03□□□□□ -0.96
VTI1A-204ENST00000480057 IL3RAP26951 378 aa9.03□□□□□ -0.96
VTI1A-204ENST00000480057 POLR2GP62487 172 aaKnown RBP eCLIP9.03□□□□□ -0.96
VTI1A-204ENST00000480057 RPL23AP62750 156 aaKnown RBP9.03□□□□□ -0.96
VTI1A-204ENST00000480057 ZNF816Q0VGE8 651 aaPredicted RBP9.03□□□□□ -0.96
VTI1A-204ENST00000480057 MIDNQ504T8 468 aa9.03□□□□□ -0.96
VTI1A-204ENST00000480057 RPL39P5Q59GN2 51 aa9.03□□□□□ -0.96
VTI1A-204ENST00000480057 Q6ZRM9 215 aa9.03□□□□□ -0.96
VTI1A-204ENST00000480057 H2BFWTQ7Z2G1 175 aa9.03□□□□□ -0.96
VTI1A-204ENST00000480057 BAP18Q8IXM2 172 aa9.03□□□□□ -0.96
VTI1A-204ENST00000480057 OR8H3Q8N146 312 aa9.03□□□□□ -0.96
VTI1A-204ENST00000480057 LYG1Q8N1E2 194 aa9.03□□□□□ -0.96
VTI1A-204ENST00000480057 LY6G5BQ8NDX9 201 aa9.03□□□□□ -0.96
VTI1A-204ENST00000480057 OR9G1Q8NH87 305 aa9.03□□□□□ -0.96
VTI1A-204ENST00000480057 IGFBPL1Q8WX77 278 aa9.03□□□□□ -0.96
VTI1A-204ENST00000480057 TMEM186Q96B77 213 aa9.03□□□□□ -0.96
VTI1A-204ENST00000480057 R3HDM4Q96D70 268 aa9.03□□□□□ -0.96
VTI1A-204ENST00000480057 AIFM2Q9BRQ8 373 aa9.03□□□□□ -0.96
VTI1A-204ENST00000480057 HSPB7Q9UBY9 170 aa9.03□□□□□ -0.96
VTI1A-204ENST00000480057 USP24Q9UPU5 2620 aa9.03□□□□□ -0.96
VTI1A-204ENST00000480057 BORCS7-ASMTA0A0B4J1R7 106 aa9.02□□□□□ -0.97
VTI1A-204ENST00000480057 MARCH11A6NNE9 402 aa9.02□□□□□ -0.97
VTI1A-204ENST00000480057 J3QR06 171 aa9.02□□□□□ -0.97
VTI1A-204ENST00000480057 SYNGR2O43760 224 aa9.02□□□□□ -0.97
VTI1A-204ENST00000480057 SSSCA1O60232 199 aa9.02□□□□□ -0.97
VTI1A-204ENST00000480057 FCGR3BO75015 233 aa9.02□□□□□ -0.97
VTI1A-204ENST00000480057 C1QL1O75973 258 aa9.02□□□□□ -0.97
VTI1A-204ENST00000480057 SCAF4O95104 1147 aaKnown RBP9.02□□□□□ -0.97
VTI1A-204ENST00000480057 S100A1P23297 94 aa9.02□□□□□ -0.97
VTI1A-204ENST00000480057 GPR6P46095 362 aaPredicted RBP9.02□□□□□ -0.97
VTI1A-204ENST00000480057 GNG10P50151 68 aa9.02□□□□□ -0.97
VTI1A-204ENST00000480057 ERVK-16P61578 105 aa9.02□□□□□ -0.97
VTI1A-204ENST00000480057 EWSR1Q01844 656 aaKnown RBP eCLIP9.02□□□□□ -0.97
VTI1A-204ENST00000480057 POU2AF1Q16633 256 aa9.02□□□□□ -0.97
VTI1A-204ENST00000480057 AVPI1Q5T686 147 aa9.02□□□□□ -0.97
VTI1A-204ENST00000480057 C11orf42Q8N5U0 333 aa9.02□□□□□ -0.97
VTI1A-204ENST00000480057 UBAC2Q8NBM4 344 aa9.02□□□□□ -0.97
VTI1A-204ENST00000480057 LEAP2Q969E1 77 aa9.02□□□□□ -0.97
VTI1A-204ENST00000480057 SMIM8Q96KF7 97 aa9.02□□□□□ -0.97
VTI1A-204ENST00000480057 TMEM133Q9H2Q1 129 aa9.02□□□□□ -0.97
VTI1A-204ENST00000480057 MED9Q9NWA0 146 aa9.02□□□□□ -0.97
VTI1A-204ENST00000480057 FBXL17Q9UF56 701 aa9.02□□□□□ -0.97
VTI1A-204ENST00000480057 AUP1Q9Y679 476 aa9.02□□□□□ -0.97
VTI1A-204ENST00000480057 PPIAL4CA0A0B4J2A2 164 aa9.01□□□□□ -0.97
VTI1A-204ENST00000480057 KCNAB3O43448 404 aa9.01□□□□□ -0.97
VTI1A-204ENST00000480057 CHST1O43916 411 aa9.01□□□□□ -0.97
VTI1A-204ENST00000480057 HRASP01112 189 aa9.01□□□□□ -0.97
VTI1A-204ENST00000480057 KRASP01116 189 aa9.01□□□□□ -0.97
VTI1A-204ENST00000480057 LIPFP07098 398 aa9.01□□□□□ -0.97
VTI1A-204ENST00000480057 PPIAL4GP0DN37 164 aa9.01□□□□□ -0.97
VTI1A-204ENST00000480057 G6PCP35575 357 aa9.01□□□□□ -0.97
VTI1A-204ENST00000480057 PAX9P55771 341 aa9.01□□□□□ -0.97
VTI1A-204ENST00000480057 GNB2P62879 340 aa9.01□□□□□ -0.97
VTI1A-204ENST00000480057 TNFRSF9Q07011 255 aa9.01□□□□□ -0.97
VTI1A-204ENST00000480057 RTL8BQ17RB0 113 aa9.01□□□□□ -0.97
VTI1A-204ENST00000480057 PDLIM3Q53GG5 364 aaPredicted RBP9.01□□□□□ -0.97
VTI1A-204ENST00000480057 OR2B11Q5JQS5 317 aa9.01□□□□□ -0.97
VTI1A-204ENST00000480057 UTF1Q5T230 341 aa9.01□□□□□ -0.97
VTI1A-204ENST00000480057 ALKAL2Q6UX46 152 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms