RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 ASB9Q96DX5 294 aa3.63□□□□□ -1.83
UPF3A-205ENST00000479712 BCL2L14Q9BZR8 327 aa3.63□□□□□ -1.83
UPF3A-205ENST00000479712 NOX3Q9HBY0 568 aa3.63□□□□□ -1.83
UPF3A-205ENST00000479712 PITPNC1Q9UKF7 332 aa3.63□□□□□ -1.83
UPF3A-205ENST00000479712 SIGLEC7Q9Y286 467 aa3.63□□□□□ -1.83
UPF3A-205ENST00000479712 DNAH2Q9P225 4427 aa3.63□□□□□ -1.83
UPF3A-205ENST00000479712 DOCK11Q5JSL3 2073 aa3.63□□□□□ -1.83
UPF3A-205ENST00000479712 APOBP04114 4563 aaKnown RBP3.62□□□□□ -1.83
UPF3A-205ENST00000479712 IGLV3-9A0A075B6K5 115 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 PRSS37A4D1T9 235 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 ARRDC5A6NEK1 342 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 J3QLI3 93 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 XKRYO14609 159 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 CDC42EP2O14613 210 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 OR2J3O76001 311 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 GADD45GO95257 159 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 GIPP09681 153 aaPredicted RBP3.62□□□□□ -1.83
UPF3A-205ENST00000479712 OR4A8P0C604 315 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 CD79AP11912 226 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 ZNF250P15622 560 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 ZNF19P17023 458 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 GSTM3P21266 225 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 MSR1P21757 451 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 KRTAP5-9P26371 169 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 GUCA1AP43080 201 aaPredicted RBP3.62□□□□□ -1.83
UPF3A-205ENST00000479712 GPR6P46095 362 aaPredicted RBP3.62□□□□□ -1.83
UPF3A-205ENST00000479712 TFPI2P48307 235 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 SUB1P53999 127 aaKnown RBP eCLIP3.62□□□□□ -1.83
UPF3A-205ENST00000479712 LSM6P62312 80 aaKnown RBP3.62□□□□□ -1.83
UPF3A-205ENST00000479712 TSPAN31Q12999 210 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 TBC1D28Q2M2D7 210 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 RFX4Q33E94 735 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 DNAL1Q4LDG9 190 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 CTRB2Q6GPI1 263 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 CNIH2Q6PI25 160 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 DNM1P34Q6PK57 102 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 SMARCD3Q6STE5 483 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 SLC16A14Q7RTX9 510 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 LHFPL3Q86UP9 236 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 DHFR2Q86XF0 187 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 WDFY1Q8IWB7 410 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 TMEM61Q8N0U2 210 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 ZCCHC24Q8N2G6 241 aaKnown RBP3.62□□□□□ -1.83
UPF3A-205ENST00000479712 FAM86B1Q8N7N1 296 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 SLC30A7Q8NEW0 376 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 OR4C5Q8NGB2 326 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 OR51A7Q8NH64 312 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 TSPAN32Q96QS1 320 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 DOK1Q99704 481 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 RARRES2Q99969 163 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 RASL11BQ9BPW5 248 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 NRIP2Q9BQI9 281 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 C1QTNF6Q9BXI9 259 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 RAB1BQ9H0U4 201 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 CCL28Q9NRJ3 127 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 TAS2R1Q9NYW7 299 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 BAIAP2Q9UQB8 552 aa3.62□□□□□ -1.83
UPF3A-205ENST00000479712 HEATR1Q9H583 2144 aaKnown RBP3.61□□□□□ -1.83
UPF3A-205ENST00000479712 TRAV27A0A087WT01 109 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 hCG_2039718K7EN88 272 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 M0R233 179 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 DLGAP1O14490 977 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 ATP5HO75947 161 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 IGLV1-47P01700 117 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 ALDOBP05062 364 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 CRABP1P29762 137 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 RRM2P31350 389 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 APLNRP35414 380 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 GPR4P46093 362 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 RGS6P49758 472 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 FXYD6P3P58550 94 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 GNB2P62879 340 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 HIST1H3AP68431 136 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 AQP6Q13520 282 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 KRR1Q13601 381 aaKnown RBP3.61□□□□□ -1.83
UPF3A-205ENST00000479712 ENDOGQ14249 297 aaKnown RBP3.61□□□□□ -1.83
UPF3A-205ENST00000479712 KIAA0087Q14695 138 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 DEFB112Q30KQ8 113 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 ALKBH6Q3KRA9 238 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 MESTQ5EB52 335 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 PABPC1L2AQ5JQF8 200 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 HIST2H3PS2Q5TEC6 136 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 OR2T5Q6IEZ7 315 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 TBPL2Q6SJ96 375 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 ARL9Q6T311 187 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 Q6ZSR3 168 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 RASSF6Q6ZTQ3 369 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 HIST2H3AQ71DI3 136 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 ZNF786Q8N393 782 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 OR2T29Q8NH02 315 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 GNPDA2Q8TDQ7 276 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 C11orf40Q8WZ69 217 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 Q96M85 177 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 ATP5SQ99766 215 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 SH3GL3Q99963 347 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 C20orf24Q9BUV8 137 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 OR2H1Q9GZK4 316 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 RACGAP1Q9H0H5 632 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 OR52D1Q9H346 318 aa3.61□□□□□ -1.83
UPF3A-205ENST00000479712 CCNB1IP1Q9NPC3 277 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms