RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 GUSBP1Q15486 140 aa9.03□□□□□ -0.96
VPS52-217ENST00000478934 INO80CQ6PI98 192 aaPredicted RBP9.03□□□□□ -0.96
VPS52-217ENST00000478934 MOB1BQ7L9L4 216 aa9.03□□□□□ -0.96
VPS52-217ENST00000478934 CD177Q8N6Q3 437 aa9.03□□□□□ -0.96
VPS52-217ENST00000478934 ABHD5Q8WTS1 349 aa9.03□□□□□ -0.96
VPS52-217ENST00000478934 CA5BP1Q8WTZ4 195 aa9.03□□□□□ -0.96
VPS52-217ENST00000478934 MAP1LC3BQ9GZQ8 125 aa9.03□□□□□ -0.96
VPS52-217ENST00000478934 WDR61Q9GZS3 305 aaKnown RBP9.03□□□□□ -0.96
VPS52-217ENST00000478934 KCNIP1Q9NZI2 227 aa9.03□□□□□ -0.96
VPS52-217ENST00000478934 DUSP13Q9UII6 198 aa9.03□□□□□ -0.96
VPS52-217ENST00000478934 ODAMA1E959 279 aa9.03□□□□□ -0.96
VPS52-217ENST00000478934 IGHG3P01860 377 aa9.03□□□□□ -0.96
VPS52-217ENST00000478934 HBE1P02100 147 aa9.03□□□□□ -0.96
VPS52-217ENST00000478934 FTH1P19P0C7X4 201 aa9.03□□□□□ -0.96
VPS52-217ENST00000478934 TRGC1P0CF51 173 aa9.03□□□□□ -0.96
VPS52-217ENST00000478934 SLC25A6P12236 298 aa9.03□□□□□ -0.96
VPS52-217ENST00000478934 HOXA5P20719 270 aa9.03□□□□□ -0.96
VPS52-217ENST00000478934 TUBG1P23258 451 aa9.03□□□□□ -0.96
VPS52-217ENST00000478934 TNFRSF9Q07011 255 aa9.03□□□□□ -0.96
VPS52-217ENST00000478934 TFF3Q07654 80 aa9.03□□□□□ -0.96
VPS52-217ENST00000478934 ADIRFQ15847 76 aa9.03□□□□□ -0.96
VPS52-217ENST00000478934 LRRC75BQ2VPJ9 315 aa9.03□□□□□ -0.96
VPS52-217ENST00000478934 FAM201AQ5SY85 155 aa9.03□□□□□ -0.96
VPS52-217ENST00000478934 ACSM6Q6P461 480 aa9.03□□□□□ -0.96
VPS52-217ENST00000478934 ZNF645Q8N7E2 425 aa9.03□□□□□ -0.96
VPS52-217ENST00000478934 OR51M1Q9H341 326 aa9.03□□□□□ -0.96
VPS52-217ENST00000478934 SMDT1Q9H4I9 107 aa9.03□□□□□ -0.96
VPS52-217ENST00000478934 AURKAIP1Q9NWT8 199 aaPredicted RBP9.03□□□□□ -0.96
VPS52-217ENST00000478934 PSG11Q9UQ72 335 aa9.03□□□□□ -0.96
VPS52-217ENST00000478934 TET2Q6N021 2002 aaPredicted RBP9.02□□□□□ -0.96
VPS52-217ENST00000478934 IGHV1-18A0A0C4DH31 117 aa9.02□□□□□ -0.96
VPS52-217ENST00000478934 MAS1LP35410 378 aa9.02□□□□□ -0.96
VPS52-217ENST00000478934 Q3ZCU0 254 aa9.02□□□□□ -0.96
VPS52-217ENST00000478934 VKORC1L1Q8N0U8 176 aa9.02□□□□□ -0.96
VPS52-217ENST00000478934 OR2Z1Q8NG97 314 aa9.02□□□□□ -0.96
VPS52-217ENST00000478934 TAF15Q92804 592 aaKnown RBP eCLIP9.02□□□□□ -0.96
VPS52-217ENST00000478934 LHX4Q969G2 390 aa9.02□□□□□ -0.96
VPS52-217ENST00000478934 SNX22Q96L94 193 aa9.02□□□□□ -0.96
VPS52-217ENST00000478934 DKK4Q9UBT3 224 aa9.02□□□□□ -0.96
VPS52-217ENST00000478934 BSNQ9UPA5 3926 aa9.02□□□□□ -0.96
VPS52-217ENST00000478934 PROP1O75360 226 aa9.02□□□□□ -0.97
VPS52-217ENST00000478934 ZNF737O75373 536 aa9.02□□□□□ -0.97
VPS52-217ENST00000478934 LY86O95711 162 aa9.02□□□□□ -0.97
VPS52-217ENST00000478934 IGHV2-70P01814 119 aa9.02□□□□□ -0.97
VPS52-217ENST00000478934 HOXC12P31275 282 aa9.02□□□□□ -0.97
VPS52-217ENST00000478934 VHLLQ6RSH7 139 aa9.02□□□□□ -0.97
VPS52-217ENST00000478934 SEM1Q6ZVN7 128 aa9.02□□□□□ -0.97
VPS52-217ENST00000478934 SSX9Q7RTT3 188 aa9.02□□□□□ -0.97
VPS52-217ENST00000478934 SLC35E3Q7Z769 313 aa9.02□□□□□ -0.97
VPS52-217ENST00000478934 C1QL4Q86Z23 238 aa9.02□□□□□ -0.97
VPS52-217ENST00000478934 LRRC29Q8WV35 223 aa9.02□□□□□ -0.97
VPS52-217ENST00000478934 FAM210BQ96KR6 192 aa9.02□□□□□ -0.97
VPS52-217ENST00000478934 ASCL3Q9NQ33 180 aa9.02□□□□□ -0.97
VPS52-217ENST00000478934 ARFGEF3Q5TH69 2177 aa9.02□□□□□ -0.97
VPS52-217ENST00000478934 ANKRD11Q6UB99 2663 aaPredicted RBP9.01□□□□□ -0.97
VPS52-217ENST00000478934 IGHV2OR16-5A0A0B4J2B6 119 aa9.01□□□□□ -0.97
VPS52-217ENST00000478934 C1QTNF9BB2RNN3 333 aa9.01□□□□□ -0.97
VPS52-217ENST00000478934 TNFSF13O75888 250 aa9.01□□□□□ -0.97
VPS52-217ENST00000478934 SELLP14151 372 aa9.01□□□□□ -0.97
VPS52-217ENST00000478934 FABP4P15090 132 aa9.01□□□□□ -0.97
VPS52-217ENST00000478934 CDX1P47902 265 aaPredicted RBP9.01□□□□□ -0.97
VPS52-217ENST00000478934 CD81P60033 236 aa9.01□□□□□ -0.97
VPS52-217ENST00000478934 HBG1P69891 147 aa9.01□□□□□ -0.97
VPS52-217ENST00000478934 HBG2P69892 147 aa9.01□□□□□ -0.97
VPS52-217ENST00000478934 EIF4EBP1Q13541 118 aaPredicted RBP9.01□□□□□ -0.97
VPS52-217ENST00000478934 ZNF383Q8NA42 475 aa9.01□□□□□ -0.97
VPS52-217ENST00000478934 LEAP2Q969E1 77 aa9.01□□□□□ -0.97
VPS52-217ENST00000478934 CXXC4Q9H2H0 198 aa9.01□□□□□ -0.97
VPS52-217ENST00000478934 SLC39A9Q9NUM3 307 aa9.01□□□□□ -0.97
VPS52-217ENST00000478934 CISD1Q9NZ45 108 aaKnown RBP9.01□□□□□ -0.97
VPS52-217ENST00000478934 A0A087WWC5 75 aa9.01□□□□□ -0.97
VPS52-217ENST00000478934 SOX15O60248 233 aa9.01□□□□□ -0.97
VPS52-217ENST00000478934 ZNF83P51522 516 aa9.01□□□□□ -0.97
VPS52-217ENST00000478934 GCSAMLQ5JQS6 135 aa9.01□□□□□ -0.97
VPS52-217ENST00000478934 NCR3LG1Q68D85 454 aa9.01□□□□□ -0.97
VPS52-217ENST00000478934 ZNRF1Q8ND25 227 aa9.01□□□□□ -0.97
VPS52-217ENST00000478934 STARD4Q96DR4 205 aa9.01□□□□□ -0.97
VPS52-217ENST00000478934 TCEAL7Q9BRU2 100 aa9.01□□□□□ -0.97
VPS52-217ENST00000478934 ELOVL1Q9BW60 279 aa9.01□□□□□ -0.97
VPS52-217ENST00000478934 GAR1Q9NY12 217 aaKnown RBP9.01□□□□□ -0.97
VPS52-217ENST00000478934 PTPRBP23467 1997 aa9.01□□□□□ -0.97
VPS52-217ENST00000478934 OOEPA6NGQ2 149 aa9.01□□□□□ -0.97
VPS52-217ENST00000478934 LRRC30A6NM36 301 aa9.01□□□□□ -0.97
VPS52-217ENST00000478934 HOXB1P14653 301 aaPredicted RBP9.01□□□□□ -0.97
VPS52-217ENST00000478934 COX5AP20674 150 aa9.01□□□□□ -0.97
VPS52-217ENST00000478934 S100PP25815 95 aa9.01□□□□□ -0.97
VPS52-217ENST00000478934 S100A2P29034 98 aa9.01□□□□□ -0.97
VPS52-217ENST00000478934 NKX6-1P78426 367 aaPredicted RBP9.01□□□□□ -0.97
VPS52-217ENST00000478934 ACSF3Q4G176 576 aaPredicted RBP9.01□□□□□ -0.97
VPS52-217ENST00000478934 TMEM41BQ5BJD5 291 aa9.01□□□□□ -0.97
VPS52-217ENST00000478934 SLC35E4Q6ICL7 350 aa9.01□□□□□ -0.97
VPS52-217ENST00000478934 TMEM14EPQ6UXP3 125 aa9.01□□□□□ -0.97
VPS52-217ENST00000478934 NINJ1Q92982 152 aa9.01□□□□□ -0.97
VPS52-217ENST00000478934 RHOVQ96L33 236 aa9.01□□□□□ -0.97
VPS52-217ENST00000478934 SMIM7Q9BQ49 75 aa9.01□□□□□ -0.97
VPS52-217ENST00000478934 SDF2L1Q9HCN8 221 aa9.01□□□□□ -0.97
VPS52-217ENST00000478934 YLPM1P49750 1951 aaKnown RBP9□□□□□ -0.97
VPS52-217ENST00000478934 TMEM210A6NLX4 147 aa9□□□□□ -0.97
VPS52-217ENST00000478934 P0C879 139 aa9□□□□□ -0.97
VPS52-217ENST00000478934 DUX4L9Q6RFH8 374 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms