RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 ATP6V0E1O15342 81 aa12.34□□□□□ -0.43
GARNL3-215ENST00000478702 SPDEFO95238 335 aa12.34□□□□□ -0.43
GARNL3-215ENST00000478702 IGHG4P01861 327 aa12.34□□□□□ -0.43
GARNL3-215ENST00000478702 IGKV1-16P04430 117 aa12.34□□□□□ -0.43
GARNL3-215ENST00000478702 OR5H8P0DN80 308 aa12.34□□□□□ -0.43
GARNL3-215ENST00000478702 SLC6A1P30531 599 aa12.34□□□□□ -0.43
GARNL3-215ENST00000478702 RPS19P39019 145 aaKnown RBP12.34□□□□□ -0.43
GARNL3-215ENST00000478702 NDPQ00604 133 aa12.34□□□□□ -0.43
GARNL3-215ENST00000478702 FOXE3Q13461 319 aa12.34□□□□□ -0.43
GARNL3-215ENST00000478702 MRPL41Q8IXM3 137 aaKnown RBP12.34□□□□□ -0.43
GARNL3-215ENST00000478702 RNF5Q99942 180 aa12.34□□□□□ -0.43
GARNL3-215ENST00000478702 FUNDC2Q9BWH2 189 aa12.34□□□□□ -0.43
GARNL3-215ENST00000478702 PARP11Q9NR21 331 aa12.34□□□□□ -0.43
GARNL3-215ENST00000478702 ZFP57Q9NU63 452 aa12.34□□□□□ -0.43
GARNL3-215ENST00000478702 TRAV18A0A075B6X5 111 aa12.33□□□□□ -0.44
GARNL3-215ENST00000478702 ELANEP08246 267 aa12.33□□□□□ -0.44
GARNL3-215ENST00000478702 LINC00205P59089 165 aa12.33□□□□□ -0.44
GARNL3-215ENST00000478702 NCS1P62166 190 aa12.33□□□□□ -0.44
GARNL3-215ENST00000478702 UBE2NLQ5JXB2 153 aa12.33□□□□□ -0.44
GARNL3-215ENST00000478702 LIN54Q6MZP7 749 aa12.33□□□□□ -0.44
GARNL3-215ENST00000478702 C18orf65Q6ZTR6 163 aa12.33□□□□□ -0.44
GARNL3-215ENST00000478702 ST6GALNAC5Q9BVH7 336 aa12.33□□□□□ -0.44
GARNL3-215ENST00000478702 FBXL15Q9H469 300 aa12.33□□□□□ -0.44
GARNL3-215ENST00000478702 AUNIPQ9H7T9 357 aa12.33□□□□□ -0.44
GARNL3-215ENST00000478702 ANXA10Q9UJ72 324 aa12.33□□□□□ -0.44
GARNL3-215ENST00000478702 NUDT19A8MXV4 375 aa12.32□□□□□ -0.44
GARNL3-215ENST00000478702 RPLP1P05386 114 aaKnown RBP12.32□□□□□ -0.44
GARNL3-215ENST00000478702 CTXN2P0C2S0 81 aa12.32□□□□□ -0.44
GARNL3-215ENST00000478702 PSMB8P28062 276 aa12.32□□□□□ -0.44
GARNL3-215ENST00000478702 THBS3P49746 956 aa12.32□□□□□ -0.44
GARNL3-215ENST00000478702 CRIP2P52943 208 aaPredicted RBP12.32□□□□□ -0.44
GARNL3-215ENST00000478702 CXorf66Q5JRM2 361 aaPredicted RBP12.32□□□□□ -0.44
GARNL3-215ENST00000478702 CNIH2Q6PI25 160 aa12.32□□□□□ -0.44
GARNL3-215ENST00000478702 C8orf86Q6ZUL3 223 aa12.32□□□□□ -0.44
GARNL3-215ENST00000478702 KLHL30-AS1Q8NEE0 82 aa12.32□□□□□ -0.44
GARNL3-215ENST00000478702 SLC25A46Q96AG3 418 aa12.32□□□□□ -0.44
GARNL3-215ENST00000478702 TSNAXQ99598 290 aaKnown RBP12.32□□□□□ -0.44
GARNL3-215ENST00000478702 DIABLOQ9NR28 239 aa12.32□□□□□ -0.44
GARNL3-215ENST00000478702 SLC35D1Q9NTN3 355 aa12.32□□□□□ -0.44
GARNL3-215ENST00000478702 RBM7Q9Y580 266 aaKnown RBP12.32□□□□□ -0.44
GARNL3-215ENST00000478702 DYNC2H1Q8NCM8 4307 aaKnown RBP12.32□□□□□ -0.44
GARNL3-215ENST00000478702 G3V318 75 aa12.31□□□□□ -0.44
GARNL3-215ENST00000478702 PPIFP30405 207 aaKnown RBP12.31□□□□□ -0.44
GARNL3-215ENST00000478702 PLGLAQ15195 96 aa12.31□□□□□ -0.44
GARNL3-215ENST00000478702 PSG5Q15238 335 aa12.31□□□□□ -0.44
GARNL3-215ENST00000478702 C19orf54Q5BKX5 351 aa12.31□□□□□ -0.44
GARNL3-215ENST00000478702 LCNL1Q6ZST4 164 aa12.31□□□□□ -0.44
GARNL3-215ENST00000478702 ZNF695Q8IW36 515 aa12.31□□□□□ -0.44
GARNL3-215ENST00000478702 BEST4Q8NFU0 473 aa12.31□□□□□ -0.44
GARNL3-215ENST00000478702 MYOZ3Q8TDC0 251 aa12.31□□□□□ -0.44
GARNL3-215ENST00000478702 KCTD12Q96CX2 325 aaKnown RBP12.31□□□□□ -0.44
GARNL3-215ENST00000478702 METTL1Q9UBP6 276 aaKnown RBP12.31□□□□□ -0.44
GARNL3-215ENST00000478702 FBXO7Q9Y3I1 522 aa12.31□□□□□ -0.44
GARNL3-215ENST00000478702 OR2W1Q9Y3N9 320 aa12.31□□□□□ -0.44
GARNL3-215ENST00000478702 TRAV41A0A0B4J266 112 aa12.3□□□□□ -0.44
GARNL3-215ENST00000478702 XRCC3O43542 346 aa12.3□□□□□ -0.44
GARNL3-215ENST00000478702 GABARAPO95166 117 aa12.3□□□□□ -0.44
GARNL3-215ENST00000478702 NFYAP23511 347 aaPredicted RBP12.3□□□□□ -0.44
GARNL3-215ENST00000478702 DUTP33316 252 aaKnown RBP12.3□□□□□ -0.44
GARNL3-215ENST00000478702 VBP1P61758 197 aa12.3□□□□□ -0.44
GARNL3-215ENST00000478702 RPS16P62249 146 aaKnown RBP12.3□□□□□ -0.44
GARNL3-215ENST00000478702 CX3CL1P78423 397 aa12.3□□□□□ -0.44
GARNL3-215ENST00000478702 TAGLNQ01995 201 aaKnown RBP12.3□□□□□ -0.44
GARNL3-215ENST00000478702 ZNF660Q6AZW8 331 aaPredicted RBP12.3□□□□□ -0.44
GARNL3-215ENST00000478702 HOGA1Q86XE5 327 aa12.3□□□□□ -0.44
GARNL3-215ENST00000478702 ZNF645Q8N7E2 425 aa12.3□□□□□ -0.44
GARNL3-215ENST00000478702 SAMD12Q8N8I0 201 aa12.3□□□□□ -0.44
GARNL3-215ENST00000478702 DDB2Q92466 427 aa12.3□□□□□ -0.44
GARNL3-215ENST00000478702 DPF1Q92782 380 aa12.3□□□□□ -0.44
GARNL3-215ENST00000478702 FLYWCH2Q96CP2 140 aaKnown RBP12.3□□□□□ -0.44
GARNL3-215ENST00000478702 ADTRPQ96IZ2 230 aa12.3□□□□□ -0.44
GARNL3-215ENST00000478702 GPR61Q9BZJ8 451 aa12.3□□□□□ -0.44
GARNL3-215ENST00000478702 TPSG1Q9NRR2 321 aa12.3□□□□□ -0.44
GARNL3-215ENST00000478702 WSB1Q9Y6I7 421 aa12.3□□□□□ -0.44
GARNL3-215ENST00000478702 STAB2Q8WWQ8 2551 aa12.3□□□□□ -0.44
GARNL3-215ENST00000478702 HUWE1Q7Z6Z7 4374 aaKnown RBP12.29□□□□□ -0.44
GARNL3-215ENST00000478702 TNCP24821 2201 aa12.29□□□□□ -0.44
GARNL3-215ENST00000478702 SLC25A17O43808 307 aa12.29□□□□□ -0.44
GARNL3-215ENST00000478702 TUSC2O75896 110 aa12.29□□□□□ -0.44
GARNL3-215ENST00000478702 IGLV1-40P01703 118 aa12.29□□□□□ -0.44
GARNL3-215ENST00000478702 IGLV2-23P01705 113 aa12.29□□□□□ -0.44
GARNL3-215ENST00000478702 HLA-DQB1P01920 261 aa12.29□□□□□ -0.44
GARNL3-215ENST00000478702 PTHLHP12272 177 aa12.29□□□□□ -0.44
GARNL3-215ENST00000478702 LUMP51884 338 aaPredicted RBP12.29□□□□□ -0.44
GARNL3-215ENST00000478702 ARPC4P59998 168 aa12.29□□□□□ -0.44
GARNL3-215ENST00000478702 CBX3Q13185 183 aa12.29□□□□□ -0.44
GARNL3-215ENST00000478702 RTL8BQ17RB0 113 aa12.29□□□□□ -0.44
GARNL3-215ENST00000478702 ECSCRQ19T08 205 aa12.29□□□□□ -0.44
GARNL3-215ENST00000478702 TMEM177Q53S58 311 aa12.29□□□□□ -0.44
GARNL3-215ENST00000478702 GVQW1Q8N7I0 195 aa12.29□□□□□ -0.44
GARNL3-215ENST00000478702 HARBI1Q96MB7 349 aa12.29□□□□□ -0.44
GARNL3-215ENST00000478702 P2RX4Q99571 388 aa12.29□□□□□ -0.44
GARNL3-215ENST00000478702 MRPS26Q9BYN8 205 aaKnown RBP12.29□□□□□ -0.44
GARNL3-215ENST00000478702 IGKV1D-13A0A0B4J2D9 117 aa12.28□□□□□ -0.44
GARNL3-215ENST00000478702 LINC00473A8K010 186 aa12.28□□□□□ -0.44
GARNL3-215ENST00000478702 FCN1O00602 326 aa12.28□□□□□ -0.44
GARNL3-215ENST00000478702 CA2P00918 260 aa12.28□□□□□ -0.44
GARNL3-215ENST00000478702 IGKV1-13P0DP09 117 aa12.28□□□□□ -0.44
GARNL3-215ENST00000478702 RRASP10301 218 aa12.28□□□□□ -0.44
GARNL3-215ENST00000478702 CBX5P45973 191 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms