RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 TMEM230Q96A57 120 aa9.46□□□□□ -0.9
PDCD11-204ENST00000478543 ZNF486Q96H40 463 aaPredicted RBP9.46□□□□□ -0.9
PDCD11-204ENST00000478543 AKR1E2Q96JD6 320 aa9.46□□□□□ -0.9
PDCD11-204ENST00000478543 ZNF251Q9BRH9 671 aa9.46□□□□□ -0.9
PDCD11-204ENST00000478543 MRPL20Q9BYC9 149 aaKnown RBP9.46□□□□□ -0.9
PDCD11-204ENST00000478543 HILPDAQ9Y5L2 63 aa9.46□□□□□ -0.9
PDCD11-204ENST00000478543 RYR3Q15413 4870 aa9.45□□□□□ -0.9
PDCD11-204ENST00000478543 TEX13DA0A0J9YY54 714 aaPredicted RBP9.45□□□□□ -0.9
PDCD11-204ENST00000478543 LEUTXA8MZ59 168 aa9.45□□□□□ -0.9
PDCD11-204ENST00000478543 PEX14O75381 377 aa9.45□□□□□ -0.9
PDCD11-204ENST00000478543 PGLYRP1O75594 196 aaPredicted RBP9.45□□□□□ -0.9
PDCD11-204ENST00000478543 EPHA1P21709 976 aa9.45□□□□□ -0.9
PDCD11-204ENST00000478543 VAMP1P23763 118 aa9.45□□□□□ -0.9
PDCD11-204ENST00000478543 TAS2R31P59538 309 aa9.45□□□□□ -0.9
PDCD11-204ENST00000478543 RND3P61587 244 aa9.45□□□□□ -0.9
PDCD11-204ENST00000478543 RPL30P62888 115 aaKnown RBP9.45□□□□□ -0.9
PDCD11-204ENST00000478543 MSMO1Q15800 293 aa9.45□□□□□ -0.9
PDCD11-204ENST00000478543 C4orf46Q504U0 113 aa9.45□□□□□ -0.9
PDCD11-204ENST00000478543 OR2B11Q5JQS5 317 aa9.45□□□□□ -0.9
PDCD11-204ENST00000478543 SLC25A42Q86VD7 318 aa9.45□□□□□ -0.9
PDCD11-204ENST00000478543 TGIF2LXQ8IUE1 241 aa9.45□□□□□ -0.9
PDCD11-204ENST00000478543 PIP4P2Q8N4L2 257 aa9.45□□□□□ -0.9
PDCD11-204ENST00000478543 ZBTB34Q8NCN2 500 aa9.45□□□□□ -0.9
PDCD11-204ENST00000478543 OR52B4Q8NGK2 314 aa9.45□□□□□ -0.9
PDCD11-204ENST00000478543 RTN4IP1Q8WWV3 396 aaPredicted RBP9.45□□□□□ -0.9
PDCD11-204ENST00000478543 ST6GALNAC6Q969X2 333 aa9.45□□□□□ -0.9
PDCD11-204ENST00000478543 RPEQ96AT9 228 aa9.45□□□□□ -0.9
PDCD11-204ENST00000478543 RBMXL1Q96E39 390 aaKnown RBP9.45□□□□□ -0.9
PDCD11-204ENST00000478543 SEC22CQ9BRL7 303 aa9.45□□□□□ -0.9
PDCD11-204ENST00000478543 MARVELD1Q9BSK0 173 aa9.45□□□□□ -0.9
PDCD11-204ENST00000478543 GHITMQ9H3K2 345 aa9.45□□□□□ -0.9
PDCD11-204ENST00000478543 NAA60Q9H7X0 242 aa9.45□□□□□ -0.9
PDCD11-204ENST00000478543 DPM3Q9P2X0 92 aa9.45□□□□□ -0.9
PDCD11-204ENST00000478543 TBL2Q9Y4P3 447 aaKnown RBP9.45□□□□□ -0.9
PDCD11-204ENST00000478543 SOX21Q9Y651 276 aaPredicted RBP9.45□□□□□ -0.9
PDCD11-204ENST00000478543 CRYM-AS1A6NIL9 109 aa9.44□□□□□ -0.9
PDCD11-204ENST00000478543 LINC00473A8K010 186 aa9.44□□□□□ -0.9
PDCD11-204ENST00000478543 LY6LH3BQJ8 138 aa9.44□□□□□ -0.9
PDCD11-204ENST00000478543 MPPED1O15442 326 aa9.44□□□□□ -0.9
PDCD11-204ENST00000478543 DHFRP00374 187 aa9.44□□□□□ -0.9
PDCD11-204ENST00000478543 GAPDHP04406 335 aaKnown RBP9.44□□□□□ -0.9
PDCD11-204ENST00000478543 OR4E1P0C645 316 aa9.44□□□□□ -0.9
PDCD11-204ENST00000478543 DUTP33316 252 aaKnown RBP9.44□□□□□ -0.9
PDCD11-204ENST00000478543 CEACAM3P40198 252 aa9.44□□□□□ -0.9
PDCD11-204ENST00000478543 ZNF137PP52743 207 aa9.44□□□□□ -0.9
PDCD11-204ENST00000478543 PPP1R1AQ13522 171 aa9.44□□□□□ -0.9
PDCD11-204ENST00000478543 EIF4EBP1Q13541 118 aaPredicted RBP9.44□□□□□ -0.9
PDCD11-204ENST00000478543 SLC9A3R2Q15599 337 aa9.44□□□□□ -0.9
PDCD11-204ENST00000478543 SSX2Q16385 188 aa9.44□□□□□ -0.9
PDCD11-204ENST00000478543 SP6Q3SY56 376 aa9.44□□□□□ -0.9
PDCD11-204ENST00000478543 MIDNQ504T8 468 aa9.44□□□□□ -0.9
PDCD11-204ENST00000478543 MINOS1Q5TGZ0 78 aa9.44□□□□□ -0.9
PDCD11-204ENST00000478543 ZNF66Q6ZN08 573 aa9.44□□□□□ -0.9
PDCD11-204ENST00000478543 KCTD9Q7L273 389 aa9.44□□□□□ -0.9
PDCD11-204ENST00000478543 MOB3BQ86TA1 216 aa9.44□□□□□ -0.9
PDCD11-204ENST00000478543 SGPP2Q8IWX5 399 aa9.44□□□□□ -0.9
PDCD11-204ENST00000478543 DYNAPQ8N1N2 210 aa9.44□□□□□ -0.9
PDCD11-204ENST00000478543 PRR13Q9NZ81 148 aa9.44□□□□□ -0.9
PDCD11-204ENST00000478543 GAB2Q9UQC2 676 aa9.44□□□□□ -0.9
PDCD11-204ENST00000478543 MINOS1-NBL1R4GNA1 71 aa9.44□□□□□ -0.9
PDCD11-204ENST00000478543 IGHV3-72A0A0B4J1Y9 119 aa9.43□□□□□ -0.9
PDCD11-204ENST00000478543 A0A0U1RQK1 487 aa9.43□□□□□ -0.9
PDCD11-204ENST00000478543 FSHBP01225 129 aa9.43□□□□□ -0.9
PDCD11-204ENST00000478543 CT45A6P0DMU7 189 aa9.43□□□□□ -0.9
PDCD11-204ENST00000478543 CT45A5P0DMU8 189 aa9.43□□□□□ -0.9
PDCD11-204ENST00000478543 CT45A7P0DMV0 189 aa9.43□□□□□ -0.9
PDCD11-204ENST00000478543 THBS3P49746 956 aa9.43□□□□□ -0.9
PDCD11-204ENST00000478543 SUPT4H1P63272 117 aaKnown RBP9.43□□□□□ -0.9
PDCD11-204ENST00000478543 ZNF816Q0VGE8 651 aaPredicted RBP9.43□□□□□ -0.9
PDCD11-204ENST00000478543 CATR1Q13166 79 aa9.43□□□□□ -0.9
PDCD11-204ENST00000478543 PDLIM3Q53GG5 364 aaPredicted RBP9.43□□□□□ -0.9
PDCD11-204ENST00000478543 TMEM128Q5BJH2 165 aa9.43□□□□□ -0.9
PDCD11-204ENST00000478543 FAM71F2Q6NXP2 309 aa9.43□□□□□ -0.9
PDCD11-204ENST00000478543 ZNF383Q8NA42 475 aa9.43□□□□□ -0.9
PDCD11-204ENST00000478543 NANPQ8TBE9 248 aa9.43□□□□□ -0.9
PDCD11-204ENST00000478543 CASTOR1Q8WTX7 329 aa9.43□□□□□ -0.9
PDCD11-204ENST00000478543 AJUBAQ96IF1 538 aa9.43□□□□□ -0.9
PDCD11-204ENST00000478543 TP53RKQ96S44 253 aa9.43□□□□□ -0.9
PDCD11-204ENST00000478543 HSD17B10Q99714 261 aaKnown RBP9.43□□□□□ -0.9
PDCD11-204ENST00000478543 NABP2Q9BQ15 211 aa9.43□□□□□ -0.9
PDCD11-204ENST00000478543 LIN7CQ9NUP9 197 aaKnown RBP9.43□□□□□ -0.9
PDCD11-204ENST00000478543 NUP50Q9UKX7 468 aa9.43□□□□□ -0.9
PDCD11-204ENST00000478543 WNK2Q9Y3S1 2297 aa9.42□□□□□ -0.9
PDCD11-204ENST00000478543 A0A0B4J293 547 aa9.42□□□□□ -0.9
PDCD11-204ENST00000478543 IGHV1-3A0A0C4DH29 117 aa9.42□□□□□ -0.9
PDCD11-204ENST00000478543 C3orf85A0A1B0GTC6 90 aa9.42□□□□□ -0.9
PDCD11-204ENST00000478543 A0A1W2PPI3 338 aa9.42□□□□□ -0.9
PDCD11-204ENST00000478543 C9orf170A2RU37 121 aa9.42□□□□□ -0.9
PDCD11-204ENST00000478543 FCGR3BO75015 233 aa9.42□□□□□ -0.9
PDCD11-204ENST00000478543 SFT2D2O95562 160 aa9.42□□□□□ -0.9
PDCD11-204ENST00000478543 HLA-AP01891 365 aaKnown RBP9.42□□□□□ -0.9
PDCD11-204ENST00000478543 IL5P05113 134 aa9.42□□□□□ -0.9
PDCD11-204ENST00000478543 OR5AC1P0C628 307 aa9.42□□□□□ -0.9
PDCD11-204ENST00000478543 F2RP25116 425 aa9.42□□□□□ -0.9
PDCD11-204ENST00000478543 MECP2P51608 486 aaKnown RBP9.42□□□□□ -0.9
PDCD11-204ENST00000478543 RAG2P55895 527 aa9.42□□□□□ -0.9
PDCD11-204ENST00000478543 UBE2MP61081 183 aaKnown RBP9.42□□□□□ -0.9
PDCD11-204ENST00000478543 DHODHQ02127 395 aa9.42□□□□□ -0.9
PDCD11-204ENST00000478543 CBX3Q13185 183 aa9.42□□□□□ -0.9
PDCD11-204ENST00000478543 DHRS2Q13268 280 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms