RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 OR10D4PQ8NGN7 298 aa15.15■□□□□ 0.02
CCM2-209ENST00000477605 HSD17B10Q99714 261 aaKnown RBP15.15■□□□□ 0.02
CCM2-209ENST00000477605 CLCF1Q9UBD9 225 aa15.15■□□□□ 0.02
CCM2-209ENST00000477605 TINAGQ9UJW2 476 aa15.15■□□□□ 0.02
CCM2-209ENST00000477605 OR5H1A6NKK0 313 aa15.15■□□□□ 0.02
CCM2-209ENST00000477605 PFN1P07737 140 aaKnown RBP15.15■□□□□ 0.02
CCM2-209ENST00000477605 SOD3P08294 240 aa15.15■□□□□ 0.02
CCM2-209ENST00000477605 FGF7P21781 194 aa15.15■□□□□ 0.02
CCM2-209ENST00000477605 ARG2P78540 354 aa15.15■□□□□ 0.02
CCM2-209ENST00000477605 BSXQ3C1V8 233 aa15.15■□□□□ 0.02
CCM2-209ENST00000477605 OR2B11Q5JQS5 317 aa15.15■□□□□ 0.02
CCM2-209ENST00000477605 RNFT1Q5M7Z0 435 aa15.15■□□□□ 0.02
CCM2-209ENST00000477605 ACP7Q6ZNF0 438 aa15.15■□□□□ 0.02
CCM2-209ENST00000477605 BEND4Q6ZU67 534 aa15.15■□□□□ 0.02
CCM2-209ENST00000477605 H2BFWTQ7Z2G1 175 aa15.15■□□□□ 0.02
CCM2-209ENST00000477605 ZNF709Q8N972 641 aa15.15■□□□□ 0.02
CCM2-209ENST00000477605 C5orf30Q96GV9 206 aa15.15■□□□□ 0.02
CCM2-209ENST00000477605 WASF3Q9UPY6 502 aa15.15■□□□□ 0.02
CCM2-209ENST00000477605 S1PR2O95136 353 aa15.14■□□□□ 0.01
CCM2-209ENST00000477605 MDKP21741 143 aaPredicted RBP15.14■□□□□ 0.01
CCM2-209ENST00000477605 ZNF816Q0VGE8 651 aaPredicted RBP15.14■□□□□ 0.01
CCM2-209ENST00000477605 TMEM249Q2WGJ8 235 aa15.14■□□□□ 0.01
CCM2-209ENST00000477605 FAM214BQ7L5A3 538 aa15.14■□□□□ 0.01
CCM2-209ENST00000477605 C1orf162Q8NEQ5 155 aaPredicted RBP15.14■□□□□ 0.01
CCM2-209ENST00000477605 PFDN5Q99471 154 aa15.14■□□□□ 0.01
CCM2-209ENST00000477605 SMCO3A2RU48 225 aa15.13■□□□□ 0.01
CCM2-209ENST00000477605 PCNX2A6NKB5 2137 aa15.13■□□□□ 0.01
CCM2-209ENST00000477605 FAM90A9PA6NNJ1 464 aa15.13■□□□□ 0.01
CCM2-209ENST00000477605 C17orf98A8MV24 154 aa15.13■□□□□ 0.01
CCM2-209ENST00000477605 MPV17P39210 176 aa15.13■□□□□ 0.01
CCM2-209ENST00000477605 BRWD1-AS2P59051 145 aa15.13■□□□□ 0.01
CCM2-209ENST00000477605 ADIRFQ15847 76 aa15.13■□□□□ 0.01
CCM2-209ENST00000477605 VASH2Q86V25 355 aa15.13■□□□□ 0.01
CCM2-209ENST00000477605 ANAPC16Q96DE5 110 aa15.13■□□□□ 0.01
CCM2-209ENST00000477605 COQ2Q96H96 371 aa15.13■□□□□ 0.01
CCM2-209ENST00000477605 GPR61Q9BZJ8 451 aa15.13■□□□□ 0.01
CCM2-209ENST00000477605 CLN8Q9UBY8 286 aa15.13■□□□□ 0.01
CCM2-209ENST00000477605 MLNRO43193 412 aa15.13■□□□□ 0.01
CCM2-209ENST00000477605 VENTXO95231 258 aa15.13■□□□□ 0.01
CCM2-209ENST00000477605 ADH4P08319 380 aa15.13■□□□□ 0.01
CCM2-209ENST00000477605 HIST1H1BP16401 226 aaKnown RBP15.13■□□□□ 0.01
CCM2-209ENST00000477605 KITLGP21583 273 aa15.13■□□□□ 0.01
CCM2-209ENST00000477605 CEBPDP49716 269 aaPredicted RBP15.13■□□□□ 0.01
CCM2-209ENST00000477605 HTD2P86397 168 aa15.13■□□□□ 0.01
CCM2-209ENST00000477605 AESQ08117 197 aa15.13■□□□□ 0.01
CCM2-209ENST00000477605 GUSBP1Q15486 140 aa15.13■□□□□ 0.01
CCM2-209ENST00000477605 FFAR4Q5NUL3 377 aa15.13■□□□□ 0.01
CCM2-209ENST00000477605 C1orf174Q8IYL3 243 aa15.13■□□□□ 0.01
CCM2-209ENST00000477605 OR5B12Q96R08 314 aa15.13■□□□□ 0.01
CCM2-209ENST00000477605 DIRC2Q96SL1 478 aa15.13■□□□□ 0.01
CCM2-209ENST00000477605 WISP2O76076 250 aa15.12■□□□□ 0.01
CCM2-209ENST00000477605 IGKV3-15P01624 115 aa15.12■□□□□ 0.01
CCM2-209ENST00000477605 IGHG3P01860 377 aa15.12■□□□□ 0.01
CCM2-209ENST00000477605 RPL23P62829 140 aaKnown RBP15.12■□□□□ 0.01
CCM2-209ENST00000477605 MZT1Q08AG7 82 aa15.12■□□□□ 0.01
CCM2-209ENST00000477605 AARDQ4LEZ3 155 aa15.12■□□□□ 0.01
CCM2-209ENST00000477605 C16orf82Q7Z2V1 217 aa15.12■□□□□ 0.01
CCM2-209ENST00000477605 PIP4P1Q86T03 277 aa15.12■□□□□ 0.01
CCM2-209ENST00000477605 ZNF808Q8N4W9 903 aaPredicted RBP15.12■□□□□ 0.01
CCM2-209ENST00000477605 DEFB124Q8NES8 71 aa15.12■□□□□ 0.01
CCM2-209ENST00000477605 NPCDR1Q9BY65 106 aa15.12■□□□□ 0.01
CCM2-209ENST00000477605 ZG16O60844 167 aa15.12■□□□□ 0.01
CCM2-209ENST00000477605 LYZL6O75951 148 aa15.12■□□□□ 0.01
CCM2-209ENST00000477605 CD55P08174 381 aa15.12■□□□□ 0.01
CCM2-209ENST00000477605 GABRA2P47869 451 aa15.12■□□□□ 0.01
CCM2-209ENST00000477605 SMIM21Q3B7S5 101 aa15.12■□□□□ 0.01
CCM2-209ENST00000477605 ACOT6Q3I5F7 207 aaPredicted RBP15.12■□□□□ 0.01
CCM2-209ENST00000477605 FAM180AQ6UWF9 173 aa15.12■□□□□ 0.01
CCM2-209ENST00000477605 ZNF383Q8NA42 475 aa15.12■□□□□ 0.01
CCM2-209ENST00000477605 SLC25A22Q9H936 323 aa15.12■□□□□ 0.01
CCM2-209ENST00000477605 ARHGAP21Q5T5U3 1957 aa15.11■□□□□ 0.01
CCM2-209ENST00000477605 H7BYZ3 331 aa15.11■□□□□ 0.01
CCM2-209ENST00000477605 HOXC12P31275 282 aa15.11■□□□□ 0.01
CCM2-209ENST00000477605 WDR82Q6UXN9 313 aa15.11■□□□□ 0.01
CCM2-209ENST00000477605 OR51G1Q8NGK1 321 aa15.11■□□□□ 0.01
CCM2-209ENST00000477605 MRGPRDQ8TDS7 321 aa15.11■□□□□ 0.01
CCM2-209ENST00000477605 RAB24Q969Q5 203 aa15.11■□□□□ 0.01
CCM2-209ENST00000477605 NEIL1Q96FI4 390 aaPredicted RBP15.11■□□□□ 0.01
CCM2-209ENST00000477605 SSX3Q99909 188 aa15.11■□□□□ 0.01
CCM2-209ENST00000477605 PARLQ9H300 379 aa15.11■□□□□ 0.01
CCM2-209ENST00000477605 GFOD1Q9NXC2 390 aa15.11■□□□□ 0.01
CCM2-209ENST00000477605 WNT9BO14905 357 aa15.1■□□□□ 0.01
CCM2-209ENST00000477605 SPINT2O43291 252 aa15.1■□□□□ 0.01
CCM2-209ENST00000477605 RPP30P78346 268 aaKnown RBP15.1■□□□□ 0.01
CCM2-209ENST00000477605 COA6Q5JTJ3 125 aaKnown RBP15.1■□□□□ 0.01
CCM2-209ENST00000477605 A0A1B0GWJ7 208 aa15.1■□□□□ 0.01
CCM2-209ENST00000477605 GALR1P47211 349 aa15.1■□□□□ 0.01
CCM2-209ENST00000477605 TNFSF10P50591 281 aa15.1■□□□□ 0.01
CCM2-209ENST00000477605 GFI1BQ5VTD9 330 aa15.1■□□□□ 0.01
CCM2-209ENST00000477605 ZNF826PQ6ZT77 177 aa15.1■□□□□ 0.01
CCM2-209ENST00000477605 TMEM183AQ8IXX5 376 aa15.1■□□□□ 0.01
CCM2-209ENST00000477605 OR4F5Q8NH21 305 aa15.1■□□□□ 0.01
CCM2-209ENST00000477605 OR4X1Q8NH49 305 aa15.1■□□□□ 0.01
CCM2-209ENST00000477605 RPUSD4Q96CM3 377 aaKnown RBP15.1■□□□□ 0.01
CCM2-209ENST00000477605 OR4F4Q96R69 305 aa15.1■□□□□ 0.01
CCM2-209ENST00000477605 SRP14P37108 136 aaKnown RBP15.09■□□□□ 0.01
CCM2-209ENST00000477605 RAB1CQ92928 201 aa15.09■□□□□ 0.01
CCM2-209ENST00000477605 WDR83OSQ9Y284 106 aa15.09■□□□□ 0.01
CCM2-209ENST00000477605 TIMM8AO60220 97 aaPredicted RBP15.08■□□□□ 0.01
CCM2-209ENST00000477605 MPDU1O75352 247 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms