RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 LYPD6Q86Y78 171 aa10.77□□□□□ -0.68
RTFDC1-207ENST00000477573 FAM58AQ8N1B3 248 aa10.77□□□□□ -0.68
RTFDC1-207ENST00000477573 RNF133Q8WVZ7 376 aa10.77□□□□□ -0.68
RTFDC1-207ENST00000477573 NKD1Q969G9 470 aa10.77□□□□□ -0.68
RTFDC1-207ENST00000477573 ABHD14BQ96IU4 210 aa10.77□□□□□ -0.68
RTFDC1-207ENST00000477573 HARBI1Q96MB7 349 aa10.77□□□□□ -0.68
RTFDC1-207ENST00000477573 AP1S3Q96PC3 154 aa10.77□□□□□ -0.68
RTFDC1-207ENST00000477573 FAM103A1Q9BTL3 118 aaKnown RBP10.77□□□□□ -0.68
RTFDC1-207ENST00000477573 MMP25Q9NPA2 562 aa10.77□□□□□ -0.68
RTFDC1-207ENST00000477573 JKAMPQ9P055 326 aa10.77□□□□□ -0.68
RTFDC1-207ENST00000477573 IGHV3-20A0A0C4DH32 117 aa10.77□□□□□ -0.69
RTFDC1-207ENST00000477573 A0A1B0GTH9 108 aa10.77□□□□□ -0.69
RTFDC1-207ENST00000477573 IGSF23A1L1A6 192 aa10.77□□□□□ -0.69
RTFDC1-207ENST00000477573 C2orf72A6NCS6 295 aa10.77□□□□□ -0.69
RTFDC1-207ENST00000477573 ANKRD30BLA7E2S9 258 aa10.77□□□□□ -0.69
RTFDC1-207ENST00000477573 SLC17A3O00476 420 aa10.77□□□□□ -0.69
RTFDC1-207ENST00000477573 GP1BBP13224 206 aa10.77□□□□□ -0.69
RTFDC1-207ENST00000477573 ZNF562Q6V9R5 426 aa10.77□□□□□ -0.69
RTFDC1-207ENST00000477573 MARCH3Q86UD3 253 aa10.77□□□□□ -0.69
RTFDC1-207ENST00000477573 SULF2Q8IWU5 870 aa10.77□□□□□ -0.69
RTFDC1-207ENST00000477573 NFAM1Q8NET5 270 aaPredicted RBP10.77□□□□□ -0.69
RTFDC1-207ENST00000477573 ZNF418Q8TF45 676 aaPredicted RBP10.77□□□□□ -0.69
RTFDC1-207ENST00000477573 BORCS7Q96B45 105 aa10.77□□□□□ -0.69
RTFDC1-207ENST00000477573 RAB1BQ9H0U4 201 aa10.77□□□□□ -0.69
RTFDC1-207ENST00000477573 WDR54Q9H977 334 aa10.77□□□□□ -0.69
RTFDC1-207ENST00000477573 POLR1DQ9Y2S0 133 aa10.77□□□□□ -0.69
RTFDC1-207ENST00000477573 BDP1A6H8Y1 2624 aa10.77□□□□□ -0.69
RTFDC1-207ENST00000477573 IGKV1D-42A0A075B6H8 117 aa10.76□□□□□ -0.69
RTFDC1-207ENST00000477573 SPAARA0A1B0GVQ0 90 aa10.76□□□□□ -0.69
RTFDC1-207ENST00000477573 A0A1W2PPV4 95 aa10.76□□□□□ -0.69
RTFDC1-207ENST00000477573 C7orf71A4D174 169 aa10.76□□□□□ -0.69
RTFDC1-207ENST00000477573 SP9P0CG40 484 aa10.76□□□□□ -0.69
RTFDC1-207ENST00000477573 IGLL1P15814 213 aa10.76□□□□□ -0.69
RTFDC1-207ENST00000477573 RPS4XP62701 263 aaKnown RBP10.76□□□□□ -0.69
RTFDC1-207ENST00000477573 GAGE5Q13069 117 aa10.76□□□□□ -0.69
RTFDC1-207ENST00000477573 GAGE6Q13070 117 aa10.76□□□□□ -0.69
RTFDC1-207ENST00000477573 IGFBP7Q16270 282 aa10.76□□□□□ -0.69
RTFDC1-207ENST00000477573 CEACAM21Q3KPI0 293 aa10.76□□□□□ -0.69
RTFDC1-207ENST00000477573 BLNKQ8WV28 456 aa10.76□□□□□ -0.69
RTFDC1-207ENST00000477573 GALMQ96C23 342 aa10.76□□□□□ -0.69
RTFDC1-207ENST00000477573 NMNAT3Q96T66 252 aa10.76□□□□□ -0.69
RTFDC1-207ENST00000477573 TAS2R4Q9NYW5 299 aa10.76□□□□□ -0.69
RTFDC1-207ENST00000477573 BOKQ9UMX3 212 aaPredicted RBP10.76□□□□□ -0.69
RTFDC1-207ENST00000477573 PRR33A8MZF0 331 aa10.76□□□□□ -0.69
RTFDC1-207ENST00000477573 F2RL2O00254 374 aa10.76□□□□□ -0.69
RTFDC1-207ENST00000477573 MLNRO43193 412 aa10.76□□□□□ -0.69
RTFDC1-207ENST00000477573 ZNF324O75467 553 aaPredicted RBP10.76□□□□□ -0.69
RTFDC1-207ENST00000477573 TTRP02766 147 aa10.76□□□□□ -0.69
RTFDC1-207ENST00000477573 GNG4P50150 75 aa10.76□□□□□ -0.69
RTFDC1-207ENST00000477573 ASCL1P50553 236 aa10.76□□□□□ -0.69
RTFDC1-207ENST00000477573 QRFPP83859 136 aa10.76□□□□□ -0.69
RTFDC1-207ENST00000477573 LPAL2Q16609 132 aa10.76□□□□□ -0.69
RTFDC1-207ENST00000477573 CDCP2Q5VXM1 449 aa10.76□□□□□ -0.69
RTFDC1-207ENST00000477573 SGMS2Q8NHU3 365 aa10.76□□□□□ -0.69
RTFDC1-207ENST00000477573 TMEM171Q8WVE6 324 aa10.76□□□□□ -0.69
RTFDC1-207ENST00000477573 GPR82Q96P67 336 aa10.76□□□□□ -0.69
RTFDC1-207ENST00000477573 GPX7Q96SL4 187 aaPredicted RBP10.76□□□□□ -0.69
RTFDC1-207ENST00000477573 MRPL18Q9H0U6 180 aaKnown RBP10.76□□□□□ -0.69
RTFDC1-207ENST00000477573 ARID1AO14497 2285 aa10.75□□□□□ -0.69
RTFDC1-207ENST00000477573 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.75□□□□□ -0.69
RTFDC1-207ENST00000477573 LOC102725191A0A1B0GVB3 256 aa10.75□□□□□ -0.69
RTFDC1-207ENST00000477573 DCDC2BA2VCK2 349 aa10.75□□□□□ -0.69
RTFDC1-207ENST00000477573 C9orf118A6NHY6 69 aa10.75□□□□□ -0.69
RTFDC1-207ENST00000477573 ZFAND5O76080 213 aa10.75□□□□□ -0.69
RTFDC1-207ENST00000477573 FAM87AP0C7U9 286 aa10.75□□□□□ -0.69
RTFDC1-207ENST00000477573 AMY2BP19961 511 aa10.75□□□□□ -0.69
RTFDC1-207ENST00000477573 ACP1P24666 158 aa10.75□□□□□ -0.69
RTFDC1-207ENST00000477573 MRPL14Q6P1L8 145 aaKnown RBP10.75□□□□□ -0.69
RTFDC1-207ENST00000477573 LCN15Q6UWW0 184 aa10.75□□□□□ -0.69
RTFDC1-207ENST00000477573 ASCL4Q6XD76 172 aa10.75□□□□□ -0.69
RTFDC1-207ENST00000477573 FA2HQ7L5A8 372 aa10.75□□□□□ -0.69
RTFDC1-207ENST00000477573 OR5C1Q8NGR4 320 aa10.75□□□□□ -0.69
RTFDC1-207ENST00000477573 TMEM45BQ96B21 275 aa10.75□□□□□ -0.69
RTFDC1-207ENST00000477573 SLC25A44Q96H78 314 aaPredicted RBP10.75□□□□□ -0.69
RTFDC1-207ENST00000477573 CITED1Q99966 193 aa10.75□□□□□ -0.69
RTFDC1-207ENST00000477573 WDR76Q9H967 626 aa10.75□□□□□ -0.69
RTFDC1-207ENST00000477573 KCNIP1Q9NZI2 227 aa10.75□□□□□ -0.69
RTFDC1-207ENST00000477573 TSSC4Q9Y5U2 329 aaPredicted RBP10.75□□□□□ -0.69
RTFDC1-207ENST00000477573 TRAV38-1A0A0B4J264 116 aa10.75□□□□□ -0.69
RTFDC1-207ENST00000477573 FAM231BA6NCW3 169 aa10.75□□□□□ -0.69
RTFDC1-207ENST00000477573 TNFRSF13BO14836 293 aaPredicted RBP10.75□□□□□ -0.69
RTFDC1-207ENST00000477573 ZNF737O75373 536 aa10.75□□□□□ -0.69
RTFDC1-207ENST00000477573 HBZP02008 142 aa10.75□□□□□ -0.69
RTFDC1-207ENST00000477573 RPL32P62910 135 aaKnown RBP10.75□□□□□ -0.69
RTFDC1-207ENST00000477573 UNC119Q13432 240 aa10.75□□□□□ -0.69
RTFDC1-207ENST00000477573 HLA-DRB5Q30154 266 aa10.75□□□□□ -0.69
RTFDC1-207ENST00000477573 BOD1L2Q8IYS8 172 aa10.75□□□□□ -0.69
RTFDC1-207ENST00000477573 OR2K2Q8NGT1 345 aa10.75□□□□□ -0.69
RTFDC1-207ENST00000477573 OR4A5Q8NH83 315 aa10.75□□□□□ -0.69
RTFDC1-207ENST00000477573 SPSB4Q96A44 273 aa10.75□□□□□ -0.69
RTFDC1-207ENST00000477573 DECR2Q9NUI1 292 aa10.75□□□□□ -0.69
RTFDC1-207ENST00000477573 ERG28Q9UKR5 140 aa10.75□□□□□ -0.69
RTFDC1-207ENST00000477573 MPDZO75970 2070 aa10.74□□□□□ -0.69
RTFDC1-207ENST00000477573 RAD51DO75771 328 aa10.74□□□□□ -0.69
RTFDC1-207ENST00000477573 CA2P00918 260 aa10.74□□□□□ -0.69
RTFDC1-207ENST00000477573 JMJD7P0C870 316 aa10.74□□□□□ -0.69
RTFDC1-207ENST00000477573 ZNF17P17021 662 aa10.74□□□□□ -0.69
RTFDC1-207ENST00000477573 GPR12P47775 334 aa10.74□□□□□ -0.69
RTFDC1-207ENST00000477573 SLC25A34Q6PIV7 304 aa10.74□□□□□ -0.69
RTFDC1-207ENST00000477573 DOLPP1Q86YN1 238 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms