RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 SAP30LQ9HAJ7 183 aa9.35□□□□□ -0.91
COL27A1-204ENST00000477421 IGHV3-72A0A0B4J1Y9 119 aa9.35□□□□□ -0.91
COL27A1-204ENST00000477421 HRASP01112 189 aa9.35□□□□□ -0.91
COL27A1-204ENST00000477421 IGHV3-48P01763 117 aa9.35□□□□□ -0.91
COL27A1-204ENST00000477421 SFTPCP11686 197 aa9.35□□□□□ -0.91
COL27A1-204ENST00000477421 ZNF343Q6P1L6 599 aa9.35□□□□□ -0.91
COL27A1-204ENST00000477421 RBKSQ9H477 322 aa9.35□□□□□ -0.91
COL27A1-204ENST00000477421 RNF7Q9UBF6 113 aa9.35□□□□□ -0.91
COL27A1-204ENST00000477421 LOC105371267A0A1B0GV96 52 aa9.35□□□□□ -0.91
COL27A1-204ENST00000477421 ODAMA1E959 279 aa9.35□□□□□ -0.91
COL27A1-204ENST00000477421 DNASE2O00115 360 aaPredicted RBP9.35□□□□□ -0.91
COL27A1-204ENST00000477421 CYB5R3P00387 301 aaPredicted RBP9.35□□□□□ -0.91
COL27A1-204ENST00000477421 OPRK1P41145 380 aa9.35□□□□□ -0.91
COL27A1-204ENST00000477421 FOXF2Q12947 444 aa9.35□□□□□ -0.91
COL27A1-204ENST00000477421 MRPL30Q8TCC3 161 aaKnown RBP9.35□□□□□ -0.91
COL27A1-204ENST00000477421 KCNIP2Q9NS61 270 aa9.35□□□□□ -0.91
COL27A1-204ENST00000477421 ANKHD1Q8IWZ3 2542 aaKnown RBP9.35□□□□□ -0.91
COL27A1-204ENST00000477421 ZNF98A6NK75 572 aa9.34□□□□□ -0.91
COL27A1-204ENST00000477421 C11orf94C9JXX5 98 aa9.34□□□□□ -0.91
COL27A1-204ENST00000477421 ZNF883P0CG24 379 aa9.34□□□□□ -0.91
COL27A1-204ENST00000477421 FAM78BQ5VT40 261 aa9.34□□□□□ -0.91
COL27A1-204ENST00000477421 ABHD12Q8N2K0 398 aa9.34□□□□□ -0.91
COL27A1-204ENST00000477421 OR4S2Q8NH73 311 aa9.34□□□□□ -0.91
COL27A1-204ENST00000477421 DAZAP1Q96EP5 407 aaKnown RBP9.34□□□□□ -0.91
COL27A1-204ENST00000477421 TUBG2Q9NRH3 451 aa9.34□□□□□ -0.91
COL27A1-204ENST00000477421 IGHV3-21A0A0B4J1V1 117 aa9.34□□□□□ -0.91
COL27A1-204ENST00000477421 TRAV20A0A0B4J274 112 aa9.34□□□□□ -0.91
COL27A1-204ENST00000477421 TMEM210A6NLX4 147 aa9.34□□□□□ -0.91
COL27A1-204ENST00000477421 UCP1P25874 307 aa9.34□□□□□ -0.91
COL27A1-204ENST00000477421 RPL31P62899 125 aaKnown RBP9.34□□□□□ -0.91
COL27A1-204ENST00000477421 TIGITQ495A1 244 aa9.34□□□□□ -0.91
COL27A1-204ENST00000477421 LRRC10Q5BKY1 277 aa9.34□□□□□ -0.91
COL27A1-204ENST00000477421 RNFT1Q5M7Z0 435 aa9.34□□□□□ -0.91
COL27A1-204ENST00000477421 WFDC1Q9HC57 220 aa9.34□□□□□ -0.91
COL27A1-204ENST00000477421 CYTL1Q9NRR1 136 aa9.34□□□□□ -0.91
COL27A1-204ENST00000477421 MALRD1Q5VYJ5 2156 aa9.34□□□□□ -0.91
COL27A1-204ENST00000477421 TRAV38-1A0A0B4J264 116 aa9.34□□□□□ -0.91
COL27A1-204ENST00000477421 hADV38S2A0JD32 116 aa9.34□□□□□ -0.91
COL27A1-204ENST00000477421 MARCH11A6NNE9 402 aa9.34□□□□□ -0.91
COL27A1-204ENST00000477421 IL18BPO95998 194 aa9.34□□□□□ -0.91
COL27A1-204ENST00000477421 S100A8P05109 93 aa9.34□□□□□ -0.91
COL27A1-204ENST00000477421 GALR1P47211 349 aa9.34□□□□□ -0.91
COL27A1-204ENST00000477421 MEOX2P50222 304 aa9.34□□□□□ -0.91
COL27A1-204ENST00000477421 LGALS4P56470 323 aa9.34□□□□□ -0.91
COL27A1-204ENST00000477421 ERVFC1-1P60608 527 aa9.34□□□□□ -0.91
COL27A1-204ENST00000477421 WDR25Q64LD2 544 aaPredicted RBP9.34□□□□□ -0.91
COL27A1-204ENST00000477421 LINC00596Q86U02 117 aa9.34□□□□□ -0.91
COL27A1-204ENST00000477421 SAXO1Q8IYX7 474 aa9.34□□□□□ -0.91
COL27A1-204ENST00000477421 LIME1Q9H400 295 aa9.34□□□□□ -0.91
COL27A1-204ENST00000477421 VAX2Q9UIW0 290 aa9.34□□□□□ -0.91
COL27A1-204ENST00000477421 CCL20P78556 96 aa9.33□□□□□ -0.92
COL27A1-204ENST00000477421 TNFRSF9Q07011 255 aa9.33□□□□□ -0.92
COL27A1-204ENST00000477421 P2RY6Q15077 328 aa9.33□□□□□ -0.92
COL27A1-204ENST00000477421 GABRA6Q16445 453 aa9.33□□□□□ -0.92
COL27A1-204ENST00000477421 RPL39P5Q59GN2 51 aa9.33□□□□□ -0.92
COL27A1-204ENST00000477421 OR4P4Q8NGL7 312 aa9.33□□□□□ -0.92
COL27A1-204ENST00000477421 OR13A1Q8NGR1 328 aa9.33□□□□□ -0.92
COL27A1-204ENST00000477421 TAF15Q92804 592 aaKnown RBP eCLIP9.33□□□□□ -0.92
COL27A1-204ENST00000477421 C17orf98A8MV24 154 aa9.33□□□□□ -0.92
COL27A1-204ENST00000477421 C16orf97H3BN30 126 aa9.33□□□□□ -0.92
COL27A1-204ENST00000477421 CD55P08174 381 aa9.33□□□□□ -0.92
COL27A1-204ENST00000477421 LINC00205P59089 165 aa9.33□□□□□ -0.92
COL27A1-204ENST00000477421 ZNF251Q9BRH9 671 aa9.33□□□□□ -0.92
COL27A1-204ENST00000477421 TUBD1Q9UJT1 453 aa9.33□□□□□ -0.92
COL27A1-204ENST00000477421 AHRRA9YTQ3 701 aa9.33□□□□□ -0.92
COL27A1-204ENST00000477421 FAM157AC9JC47 383 aa9.33□□□□□ -0.92
COL27A1-204ENST00000477421 MGST3O14880 152 aa9.33□□□□□ -0.92
COL27A1-204ENST00000477421 BCL2P10415 239 aa9.33□□□□□ -0.92
COL27A1-204ENST00000477421 NTF3P20783 257 aa9.33□□□□□ -0.92
COL27A1-204ENST00000477421 ARSJQ5FYB0 599 aaPredicted RBP9.33□□□□□ -0.92
COL27A1-204ENST00000477421 MISP3Q96FF7 219 aa9.33□□□□□ -0.92
COL27A1-204ENST00000477421 NEIL1Q96FI4 390 aaPredicted RBP9.33□□□□□ -0.92
COL27A1-204ENST00000477421 PRO1933Q9H354 126 aa9.33□□□□□ -0.92
COL27A1-204ENST00000477421 AP4M1O00189 453 aa9.32□□□□□ -0.92
COL27A1-204ENST00000477421 ADH4P08319 380 aa9.32□□□□□ -0.92
COL27A1-204ENST00000477421 OR10J4P0C629 311 aa9.32□□□□□ -0.92
COL27A1-204ENST00000477421 TCL1AP56279 114 aa9.32□□□□□ -0.92
COL27A1-204ENST00000477421 B2MP61769 119 aa9.32□□□□□ -0.92
COL27A1-204ENST00000477421 SLC35E3Q7Z769 313 aa9.32□□□□□ -0.92
COL27A1-204ENST00000477421 ZDHHC11Q9H8X9 412 aa9.32□□□□□ -0.92
COL27A1-204ENST00000477421 DUXBA0A1W2PPF3 345 aa9.32□□□□□ -0.92
COL27A1-204ENST00000477421 TRGC2P03986 189 aa9.32□□□□□ -0.92
COL27A1-204ENST00000477421 MPZP25189 248 aa9.32□□□□□ -0.92
COL27A1-204ENST00000477421 CD1BP29016 333 aa9.32□□□□□ -0.92
COL27A1-204ENST00000477421 MRGPRGQ86SM5 289 aa9.32□□□□□ -0.92
COL27A1-204ENST00000477421 SMIM8Q96KF7 97 aa9.32□□□□□ -0.92
COL27A1-204ENST00000477421 ETV2O00321 342 aaPredicted RBP9.32□□□□□ -0.92
COL27A1-204ENST00000477421 CDX4O14627 284 aaPredicted RBP9.32□□□□□ -0.92
COL27A1-204ENST00000477421 RAMP3O60896 148 aa9.32□□□□□ -0.92
COL27A1-204ENST00000477421 ORM2P19652 201 aa9.32□□□□□ -0.92
COL27A1-204ENST00000477421 CSRP1P21291 193 aaKnown RBP9.32□□□□□ -0.92
COL27A1-204ENST00000477421 IL3RAP26951 378 aa9.32□□□□□ -0.92
COL27A1-204ENST00000477421 RAB7AP51149 207 aa9.32□□□□□ -0.92
COL27A1-204ENST00000477421 SUB1P53999 127 aaKnown RBP eCLIP9.32□□□□□ -0.92
COL27A1-204ENST00000477421 C20orf204Q6ZNR8 217 aa9.32□□□□□ -0.92
COL27A1-204ENST00000477421 ZNF645Q8N7E2 425 aa9.32□□□□□ -0.92
COL27A1-204ENST00000477421 RAB24Q969Q5 203 aa9.32□□□□□ -0.92
COL27A1-204ENST00000477421 HARBI1Q96MB7 349 aa9.32□□□□□ -0.92
COL27A1-204ENST00000477421 FAM103A1Q9BTL3 118 aaKnown RBP9.32□□□□□ -0.92
COL27A1-204ENST00000477421 CRIM1Q9NZV1 1036 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms