RNA–Protein interactions for RNA: ENST00000477132.1

PRKD3-209, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-209ENST00000477132 A0A0A6YYH2 397 aa9.6□□□□□ -0.87
PRKD3-209ENST00000477132 IGKV1D-13A0A0B4J2D9 117 aa9.6□□□□□ -0.87
PRKD3-209ENST00000477132 MEIS3P1A6NDR6 274 aa9.6□□□□□ -0.87
PRKD3-209ENST00000477132 A6NJ64 397 aa9.6□□□□□ -0.87
PRKD3-209ENST00000477132 LINC00473A8K010 186 aa9.6□□□□□ -0.87
PRKD3-209ENST00000477132 IGLV2-14P01704 120 aa9.6□□□□□ -0.87
PRKD3-209ENST00000477132 IGKV1-13P0DP09 117 aa9.6□□□□□ -0.87
PRKD3-209ENST00000477132 VDAC1P21796 283 aa9.6□□□□□ -0.87
PRKD3-209ENST00000477132 PPIFP30405 207 aaKnown RBP9.6□□□□□ -0.87
PRKD3-209ENST00000477132 PSG5Q15238 335 aa9.6□□□□□ -0.87
PRKD3-209ENST00000477132 CTF1Q16619 201 aa9.6□□□□□ -0.87
PRKD3-209ENST00000477132 BEAN1Q3B7T3 259 aa9.6□□□□□ -0.87
PRKD3-209ENST00000477132 OXLD1Q5BKU9 147 aa9.6□□□□□ -0.87
PRKD3-209ENST00000477132 C19orf54Q5BKX5 351 aa9.6□□□□□ -0.87
PRKD3-209ENST00000477132 UBE2NLQ5JXB2 153 aa9.6□□□□□ -0.87
PRKD3-209ENST00000477132 LIN54Q6MZP7 749 aa9.6□□□□□ -0.87
PRKD3-209ENST00000477132 TEX38Q6PEX7 206 aa9.6□□□□□ -0.87
PRKD3-209ENST00000477132 CNIH2Q6PI25 160 aa9.6□□□□□ -0.87
PRKD3-209ENST00000477132 COMMD1Q8N668 190 aa9.6□□□□□ -0.87
PRKD3-209ENST00000477132 SAMD12Q8N8I0 201 aa9.6□□□□□ -0.87
PRKD3-209ENST00000477132 DDB2Q92466 427 aa9.6□□□□□ -0.87
PRKD3-209ENST00000477132 SNAPC3Q92966 411 aa9.6□□□□□ -0.87
PRKD3-209ENST00000477132 SLC35D1Q9NTN3 355 aa9.6□□□□□ -0.87
PRKD3-209ENST00000477132 WSB1Q9Y6I7 421 aa9.6□□□□□ -0.87
PRKD3-209ENST00000477132 RBBP9O75884 186 aa9.59□□□□□ -0.87
PRKD3-209ENST00000477132 GABARAPO95166 117 aa9.59□□□□□ -0.87
PRKD3-209ENST00000477132 IGLV2-23P01705 113 aa9.59□□□□□ -0.87
PRKD3-209ENST00000477132 IGHG4P01861 327 aa9.59□□□□□ -0.87
PRKD3-209ENST00000477132 APOA2P02652 100 aa9.59□□□□□ -0.87
PRKD3-209ENST00000477132 EIF4EP06730 217 aaKnown RBP9.59□□□□□ -0.87
PRKD3-209ENST00000477132 EGR2P11161 476 aaPredicted RBP9.59□□□□□ -0.87
PRKD3-209ENST00000477132 PSMB8P28062 276 aa9.59□□□□□ -0.87
PRKD3-209ENST00000477132 DUTP33316 252 aaKnown RBP9.59□□□□□ -0.87
PRKD3-209ENST00000477132 ALDH3B2P48448 385 aa9.59□□□□□ -0.87
PRKD3-209ENST00000477132 CX3CL1P78423 397 aa9.59□□□□□ -0.87
PRKD3-209ENST00000477132 SSBP2P81877 361 aaPredicted RBP9.59□□□□□ -0.87
PRKD3-209ENST00000477132 FOXE3Q13461 319 aa9.59□□□□□ -0.87
PRKD3-209ENST00000477132 HOGA1Q86XE5 327 aa9.59□□□□□ -0.87
PRKD3-209ENST00000477132 ANKRD13BQ86YJ7 626 aa9.59□□□□□ -0.87
PRKD3-209ENST00000477132 RNF152Q8N8N0 203 aa9.59□□□□□ -0.87
PRKD3-209ENST00000477132 BVESQ8NE79 360 aa9.59□□□□□ -0.87
PRKD3-209ENST00000477132 KLHL30-AS1Q8NEE0 82 aa9.59□□□□□ -0.87
PRKD3-209ENST00000477132 BEST4Q8NFU0 473 aa9.59□□□□□ -0.87
PRKD3-209ENST00000477132 DUX3Q96PT4 197 aa9.59□□□□□ -0.87
PRKD3-209ENST00000477132 CLCC1Q96S66 551 aa9.59□□□□□ -0.87
PRKD3-209ENST00000477132 RNF5Q99942 180 aa9.59□□□□□ -0.87
PRKD3-209ENST00000477132 MRPS26Q9BYN8 205 aaKnown RBP9.59□□□□□ -0.87
PRKD3-209ENST00000477132 DIABLOQ9NR28 239 aa9.59□□□□□ -0.87
PRKD3-209ENST00000477132 ZFP57Q9NU63 452 aa9.59□□□□□ -0.87
PRKD3-209ENST00000477132 METTL1Q9UBP6 276 aaKnown RBP9.59□□□□□ -0.87
PRKD3-209ENST00000477132 OR2W1Q9Y3N9 320 aa9.59□□□□□ -0.87
PRKD3-209ENST00000477132 RBM7Q9Y580 266 aaKnown RBP9.59□□□□□ -0.87
PRKD3-209ENST00000477132 NOTCH1P46531 2555 aa9.58□□□□□ -0.88
PRKD3-209ENST00000477132 TRAV41A0A0B4J266 112 aa9.58□□□□□ -0.88
PRKD3-209ENST00000477132 XRCC3O43542 346 aa9.58□□□□□ -0.88
PRKD3-209ENST00000477132 SLC25A17O43808 307 aa9.58□□□□□ -0.88
PRKD3-209ENST00000477132 SOX15O60248 233 aa9.58□□□□□ -0.88
PRKD3-209ENST00000477132 TUSC2O75896 110 aa9.58□□□□□ -0.88
PRKD3-209ENST00000477132 SPDEFO95238 335 aa9.58□□□□□ -0.88
PRKD3-209ENST00000477132 CA2P00918 260 aa9.58□□□□□ -0.88
PRKD3-209ENST00000477132 HLA-DQB1P01920 261 aa9.58□□□□□ -0.88
PRKD3-209ENST00000477132 PF4P02776 101 aa9.58□□□□□ -0.88
PRKD3-209ENST00000477132 CRYGBP07316 175 aa9.58□□□□□ -0.88
PRKD3-209ENST00000477132 CTXN2P0C2S0 81 aa9.58□□□□□ -0.88
PRKD3-209ENST00000477132 IGLL1P15814 213 aa9.58□□□□□ -0.88
PRKD3-209ENST00000477132 THBS3P49746 956 aa9.58□□□□□ -0.88
PRKD3-209ENST00000477132 TAS2R20P59543 309 aa9.58□□□□□ -0.88
PRKD3-209ENST00000477132 RPS16P62249 146 aaKnown RBP9.58□□□□□ -0.88
PRKD3-209ENST00000477132 PLGLAQ15195 96 aa9.58□□□□□ -0.88
PRKD3-209ENST00000477132 ECSCRQ19T08 205 aa9.58□□□□□ -0.88
PRKD3-209ENST00000477132 DEFB136Q30KP8 78 aa9.58□□□□□ -0.88
PRKD3-209ENST00000477132 KPRPQ5T749 579 aaPredicted RBP9.58□□□□□ -0.88
PRKD3-209ENST00000477132 GPR107Q5VW38 600 aa9.58□□□□□ -0.88
PRKD3-209ENST00000477132 ZNF645Q8N7E2 425 aa9.58□□□□□ -0.88
PRKD3-209ENST00000477132 LINC00482Q8N8I6 264 aa9.58□□□□□ -0.88
PRKD3-209ENST00000477132 WFDC9Q8NEX5 89 aa9.58□□□□□ -0.88
PRKD3-209ENST00000477132 MYOZ3Q8TDC0 251 aa9.58□□□□□ -0.88
PRKD3-209ENST00000477132 FLYWCH2Q96CP2 140 aaKnown RBP9.58□□□□□ -0.88
PRKD3-209ENST00000477132 FAM103A1Q9BTL3 118 aaKnown RBP9.58□□□□□ -0.88
PRKD3-209ENST00000477132 GON7Q9BXV9 100 aa9.58□□□□□ -0.88
PRKD3-209ENST00000477132 KLK15Q9H2R5 256 aa9.58□□□□□ -0.88
PRKD3-209ENST00000477132 SRRM4A7MD48 611 aaKnown RBP9.57□□□□□ -0.88
PRKD3-209ENST00000477132 NUDT19A8MXV4 375 aa9.57□□□□□ -0.88
PRKD3-209ENST00000477132 ARPC1BO15143 372 aaKnown RBP9.57□□□□□ -0.88
PRKD3-209ENST00000477132 IGLV1-40P01703 118 aa9.57□□□□□ -0.88
PRKD3-209ENST00000477132 PRB2P02812 416 aaPredicted RBP9.57□□□□□ -0.88
PRKD3-209ENST00000477132 ELANEP08246 267 aa9.57□□□□□ -0.88
PRKD3-209ENST00000477132 CD33P20138 364 aa9.57□□□□□ -0.88
PRKD3-209ENST00000477132 LUMP51884 338 aaPredicted RBP9.57□□□□□ -0.88
PRKD3-209ENST00000477132 CRIP2P52943 208 aaPredicted RBP9.57□□□□□ -0.88
PRKD3-209ENST00000477132 RPL30P62888 115 aaKnown RBP9.57□□□□□ -0.88
PRKD3-209ENST00000477132 PJVKQ0ZLH3 352 aa9.57□□□□□ -0.88
PRKD3-209ENST00000477132 EIF4EBP1Q13541 118 aaPredicted RBP9.57□□□□□ -0.88
PRKD3-209ENST00000477132 KIAA0141Q14154 515 aaPredicted RBP9.57□□□□□ -0.88
PRKD3-209ENST00000477132 MRGPRG-AS1Q2M3A8 158 aa9.57□□□□□ -0.88
PRKD3-209ENST00000477132 PDLIM3Q53GG5 364 aaPredicted RBP9.57□□□□□ -0.88
PRKD3-209ENST00000477132 TMEM177Q53S58 311 aa9.57□□□□□ -0.88
PRKD3-209ENST00000477132 CXorf66Q5JRM2 361 aaPredicted RBP9.57□□□□□ -0.88
PRKD3-209ENST00000477132 TMEM69Q5SWH9 247 aa9.57□□□□□ -0.88
PRKD3-209ENST00000477132 ZNF660Q6AZW8 331 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms