RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 TVP23CQ96ET8 276 aa13.72□□□□□ -0.21
TMEM53-208ENST00000476724 NIPSNAP3BQ9BS92 247 aa13.72□□□□□ -0.21
TMEM53-208ENST00000476724 MRPL37Q9BZE1 423 aaKnown RBP13.72□□□□□ -0.21
TMEM53-208ENST00000476724 SH3BGRL2Q9UJC5 107 aa13.72□□□□□ -0.21
TMEM53-208ENST00000476724 RP1L1Q8IWN7 2480 aaPredicted RBP13.72□□□□□ -0.21
TMEM53-208ENST00000476724 C17orf98A8MV24 154 aa13.71□□□□□ -0.21
TMEM53-208ENST00000476724 C15orf65H3BRN8 121 aa13.71□□□□□ -0.21
TMEM53-208ENST00000476724 S1PR2O95136 353 aa13.71□□□□□ -0.21
TMEM53-208ENST00000476724 OR2C1O95371 312 aa13.71□□□□□ -0.21
TMEM53-208ENST00000476724 LY86O95711 162 aa13.71□□□□□ -0.21
TMEM53-208ENST00000476724 RPL35P42766 123 aaKnown RBP13.71□□□□□ -0.21
TMEM53-208ENST00000476724 H2BFWTQ7Z2G1 175 aa13.71□□□□□ -0.21
TMEM53-208ENST00000476724 CYB561D1Q8N8Q1 229 aa13.71□□□□□ -0.21
TMEM53-208ENST00000476724 OR2Z1Q8NG97 314 aa13.71□□□□□ -0.21
TMEM53-208ENST00000476724 P2RX4Q99571 388 aa13.71□□□□□ -0.21
TMEM53-208ENST00000476724 ESRP2Q9H6T0 727 aaKnown RBP13.71□□□□□ -0.21
TMEM53-208ENST00000476724 METRNQ9UJH8 293 aa13.71□□□□□ -0.21
TMEM53-208ENST00000476724 A0A1W2PPE2 198 aa13.71□□□□□ -0.21
TMEM53-208ENST00000476724 ZNF737O75373 536 aa13.71□□□□□ -0.21
TMEM53-208ENST00000476724 IGHV3-13P01766 116 aa13.71□□□□□ -0.21
TMEM53-208ENST00000476724 ARG1P05089 322 aa13.71□□□□□ -0.21
TMEM53-208ENST00000476724 S100A6P06703 90 aa13.71□□□□□ -0.21
TMEM53-208ENST00000476724 SSTR5P35346 364 aa13.71□□□□□ -0.21
TMEM53-208ENST00000476724 BRWD1-AS2P59051 145 aa13.71□□□□□ -0.21
TMEM53-208ENST00000476724 CR1LQ2VPA4 569 aa13.71□□□□□ -0.21
TMEM53-208ENST00000476724 RAB39BQ96DA2 213 aa13.71□□□□□ -0.21
TMEM53-208ENST00000476724 SNX22Q96L94 193 aa13.71□□□□□ -0.21
TMEM53-208ENST00000476724 HEATR1Q9H583 2144 aaKnown RBP13.71□□□□□ -0.22
TMEM53-208ENST00000476724 TLN1Q9Y490 2541 aaKnown RBP13.7□□□□□ -0.22
TMEM53-208ENST00000476724 NCOR2Q9Y618 2525 aa13.7□□□□□ -0.22
TMEM53-208ENST00000476724 B4DEV8 164 aa13.7□□□□□ -0.22
TMEM53-208ENST00000476724 PRRG2O14669 202 aa13.7□□□□□ -0.22
TMEM53-208ENST00000476724 MGST3O14880 152 aa13.7□□□□□ -0.22
TMEM53-208ENST00000476724 BCL2P10415 239 aa13.7□□□□□ -0.22
TMEM53-208ENST00000476724 TAGLN2P37802 199 aaKnown RBP13.7□□□□□ -0.22
TMEM53-208ENST00000476724 RPS23P62266 143 aaKnown RBP13.7□□□□□ -0.22
TMEM53-208ENST00000476724 AGMATQ9BSE5 352 aa13.7□□□□□ -0.22
TMEM53-208ENST00000476724 SIRT7Q9NRC8 400 aa13.7□□□□□ -0.22
TMEM53-208ENST00000476724 GNG13Q9P2W3 67 aa13.7□□□□□ -0.22
TMEM53-208ENST00000476724 JPT1Q9UK76 154 aa13.7□□□□□ -0.22
TMEM53-208ENST00000476724 CXorf65A6NEN9 183 aa13.7□□□□□ -0.22
TMEM53-208ENST00000476724 ZZEF1O43149 2961 aa13.7□□□□□ -0.22
TMEM53-208ENST00000476724 IFNA1P01562 189 aa13.7□□□□□ -0.22
TMEM53-208ENST00000476724 GLRXP35754 106 aa13.7□□□□□ -0.22
TMEM53-208ENST00000476724 OR2B11Q5JQS5 317 aa13.7□□□□□ -0.22
TMEM53-208ENST00000476724 MRGPRGQ86SM5 289 aa13.7□□□□□ -0.22
TMEM53-208ENST00000476724 C1QL4Q86Z23 238 aa13.7□□□□□ -0.22
TMEM53-208ENST00000476724 TPRX1Q8N7U7 411 aa13.7□□□□□ -0.22
TMEM53-208ENST00000476724 OR10P1Q8NGE3 313 aa13.7□□□□□ -0.22
TMEM53-208ENST00000476724 RCC1LQ96I51 464 aaKnown RBP13.7□□□□□ -0.22
TMEM53-208ENST00000476724 TMEM147Q9BVK8 224 aa13.7□□□□□ -0.22
TMEM53-208ENST00000476724 VSIRQ9H7M9 311 aa13.7□□□□□ -0.22
TMEM53-208ENST00000476724 PSG11Q9UQ72 335 aa13.7□□□□□ -0.22
TMEM53-208ENST00000476724 PIEZO1Q92508 2521 aa13.69□□□□□ -0.22
TMEM53-208ENST00000476724 A0A0G2JNJ9 132 aa13.69□□□□□ -0.22
TMEM53-208ENST00000476724 C5orf52A6NGY3 159 aa13.69□□□□□ -0.22
TMEM53-208ENST00000476724 ZNF98A6NK75 572 aa13.69□□□□□ -0.22
TMEM53-208ENST00000476724 MBP02144 154 aa13.69□□□□□ -0.22
TMEM53-208ENST00000476724 CRYAAP02489 173 aa13.69□□□□□ -0.22
TMEM53-208ENST00000476724 BMP5P22003 454 aa13.69□□□□□ -0.22
TMEM53-208ENST00000476724 CEBPGP53567 150 aa13.69□□□□□ -0.22
TMEM53-208ENST00000476724 DLK1P80370 383 aa13.69□□□□□ -0.22
TMEM53-208ENST00000476724 ZNF726P1Q15940 193 aa13.69□□□□□ -0.22
TMEM53-208ENST00000476724 OR8G2PQ6IF36 304 aa13.69□□□□□ -0.22
TMEM53-208ENST00000476724 BTNL3Q6UXE8 466 aa13.69□□□□□ -0.22
TMEM53-208ENST00000476724 DTD1Q8TEA8 209 aa13.69□□□□□ -0.22
TMEM53-208ENST00000476724 MUCL1Q96DR8 90 aa13.69□□□□□ -0.22
TMEM53-208ENST00000476724 YPEL4Q96NS1 127 aa13.69□□□□□ -0.22
TMEM53-208ENST00000476724 SFXN3Q9BWM7 321 aa13.69□□□□□ -0.22
TMEM53-208ENST00000476724 Q9UFV3 132 aa13.69□□□□□ -0.22
TMEM53-208ENST00000476724 DUSP13Q9UII6 198 aa13.69□□□□□ -0.22
TMEM53-208ENST00000476724 CACNA1DQ01668 2161 aa13.69□□□□□ -0.22
TMEM53-208ENST00000476724 UBE2L5PA0A1B0GUS4 154 aa13.68□□□□□ -0.22
TMEM53-208ENST00000476724 FAM90A9PA6NNJ1 464 aa13.68□□□□□ -0.22
TMEM53-208ENST00000476724 YPEL1O60688 119 aa13.68□□□□□ -0.22
TMEM53-208ENST00000476724 TFF1P04155 84 aa13.68□□□□□ -0.22
TMEM53-208ENST00000476724 SNRPEP62304 92 aaKnown RBP13.68□□□□□ -0.22
TMEM53-208ENST00000476724 HOXA4Q00056 320 aaPredicted RBP13.68□□□□□ -0.22
TMEM53-208ENST00000476724 PNRC1Q12796 327 aaPredicted RBP13.68□□□□□ -0.22
TMEM53-208ENST00000476724 CHD3Q12873 2000 aaKnown RBP13.68□□□□□ -0.22
TMEM53-208ENST00000476724 FAM53AQ6NSI3 398 aaPredicted RBP13.68□□□□□ -0.22
TMEM53-208ENST00000476724 LCN15Q6UWW0 184 aa13.68□□□□□ -0.22
TMEM53-208ENST00000476724 RFESDQ8TAC1 157 aa13.68□□□□□ -0.22
TMEM53-208ENST00000476724 S100PBPQ96BU1 408 aa13.68□□□□□ -0.22
TMEM53-208ENST00000476724 YPEL2Q96QA6 119 aa13.68□□□□□ -0.22
TMEM53-208ENST00000476724 NCOR1P1Q9H4R4 102 aa13.68□□□□□ -0.22
TMEM53-208ENST00000476724 ZNF835Q9Y2P0 537 aa13.68□□□□□ -0.22
TMEM53-208ENST00000476724 IGKV1D-17A0A075B6S4 117 aa13.68□□□□□ -0.22
TMEM53-208ENST00000476724 IGHV3-43A0A0B4J1X8 118 aa13.68□□□□□ -0.22
TMEM53-208ENST00000476724 LINC00473A8K010 186 aa13.68□□□□□ -0.22
TMEM53-208ENST00000476724 PMS2P5A8MQ11 134 aa13.68□□□□□ -0.22
TMEM53-208ENST00000476724 IFNA17P01571 189 aa13.68□□□□□ -0.22
TMEM53-208ENST00000476724 FBP1P09467 338 aa13.68□□□□□ -0.22
TMEM53-208ENST00000476724 IGHV3-43DP0DP04 118 aa13.68□□□□□ -0.22
TMEM53-208ENST00000476724 ZNF83P51522 516 aa13.68□□□□□ -0.22
TMEM53-208ENST00000476724 EDDM3AQ14507 147 aa13.68□□□□□ -0.22
TMEM53-208ENST00000476724 Q3ZCU0 254 aa13.68□□□□□ -0.22
TMEM53-208ENST00000476724 ALKBH2Q6NS38 261 aa13.68□□□□□ -0.22
TMEM53-208ENST00000476724 ADAM5Q6NVV9 412 aa13.68□□□□□ -0.22
TMEM53-208ENST00000476724 RBMS3Q6XE24 437 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms