RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-222ENST00000475580 SLC35D1Q9NTN3 355 aa12.95□□□□□ -0.34
VPS8-222ENST00000475580 ANXA10Q9UJ72 324 aa12.95□□□□□ -0.34
VPS8-222ENST00000475580 WSB1Q9Y6I7 421 aa12.95□□□□□ -0.34
VPS8-222ENST00000475580 IGLV2-23P01705 113 aa12.94□□□□□ -0.34
VPS8-222ENST00000475580 APOA2P02652 100 aa12.94□□□□□ -0.34
VPS8-222ENST00000475580 CTXN2P0C2S0 81 aa12.94□□□□□ -0.34
VPS8-222ENST00000475580 EGR2P11161 476 aaPredicted RBP12.94□□□□□ -0.34
VPS8-222ENST00000475580 PTHLHP12272 177 aa12.94□□□□□ -0.34
VPS8-222ENST00000475580 THBS3P49746 956 aa12.94□□□□□ -0.34
VPS8-222ENST00000475580 CX3CL1P78423 397 aa12.94□□□□□ -0.34
VPS8-222ENST00000475580 GVQW1Q8N7I0 195 aa12.94□□□□□ -0.34
VPS8-222ENST00000475580 LINC00482Q8N8I6 264 aa12.94□□□□□ -0.34
VPS8-222ENST00000475580 KLHL30-AS1Q8NEE0 82 aa12.94□□□□□ -0.34
VPS8-222ENST00000475580 MYOZ3Q8TDC0 251 aa12.94□□□□□ -0.34
VPS8-222ENST00000475580 DDB2Q92466 427 aa12.94□□□□□ -0.34
VPS8-222ENST00000475580 SLC25A46Q96AG3 418 aa12.94□□□□□ -0.34
VPS8-222ENST00000475580 TPSG1Q9NRR2 321 aa12.94□□□□□ -0.34
VPS8-222ENST00000475580 OR2W1Q9Y3N9 320 aa12.94□□□□□ -0.34
VPS8-222ENST00000475580 TRAV41A0A0B4J266 112 aa12.93□□□□□ -0.34
VPS8-222ENST00000475580 SPDEFO95238 335 aa12.93□□□□□ -0.34
VPS8-222ENST00000475580 IGLV1-40P01703 118 aa12.93□□□□□ -0.34
VPS8-222ENST00000475580 HLA-DQB1P01920 261 aa12.93□□□□□ -0.34
VPS8-222ENST00000475580 IGLL1P15814 213 aa12.93□□□□□ -0.34
VPS8-222ENST00000475580 CD33P20138 364 aa12.93□□□□□ -0.34
VPS8-222ENST00000475580 NFYAP23511 347 aaPredicted RBP12.93□□□□□ -0.34
VPS8-222ENST00000475580 DUTP33316 252 aaKnown RBP12.93□□□□□ -0.34
VPS8-222ENST00000475580 CRIP2P52943 208 aaPredicted RBP12.93□□□□□ -0.34
VPS8-222ENST00000475580 VBP1P61758 197 aa12.93□□□□□ -0.34
VPS8-222ENST00000475580 RPS16P62249 146 aaKnown RBP12.93□□□□□ -0.34
VPS8-222ENST00000475580 CXorf66Q5JRM2 361 aaPredicted RBP12.93□□□□□ -0.34
VPS8-222ENST00000475580 ZNF660Q6AZW8 331 aaPredicted RBP12.93□□□□□ -0.34
VPS8-222ENST00000475580 HOGA1Q86XE5 327 aa12.93□□□□□ -0.34
VPS8-222ENST00000475580 ZNF695Q8IW36 515 aa12.93□□□□□ -0.34
VPS8-222ENST00000475580 MRPL41Q8IXM3 137 aaKnown RBP12.93□□□□□ -0.34
VPS8-222ENST00000475580 MINDY2Q8NBR6 621 aa12.93□□□□□ -0.34
VPS8-222ENST00000475580 FLYWCH2Q96CP2 140 aaKnown RBP12.93□□□□□ -0.34
VPS8-222ENST00000475580 P2RX4Q99571 388 aa12.93□□□□□ -0.34
VPS8-222ENST00000475580 TSNAXQ99598 290 aaKnown RBP12.93□□□□□ -0.34
VPS8-222ENST00000475580 NAA50Q9GZZ1 169 aaKnown RBP12.93□□□□□ -0.34
VPS8-222ENST00000475580 DIABLOQ9NR28 239 aa12.93□□□□□ -0.34
VPS8-222ENST00000475580 METTL1Q9UBP6 276 aaKnown RBP12.93□□□□□ -0.34
VPS8-222ENST00000475580 RBM7Q9Y580 266 aaKnown RBP12.93□□□□□ -0.34
VPS8-222ENST00000475580 IGKV1D-13A0A0B4J2D9 117 aa12.92□□□□□ -0.34
VPS8-222ENST00000475580 LINC00473A8K010 186 aa12.92□□□□□ -0.34
VPS8-222ENST00000475580 NUDT19A8MXV4 375 aa12.92□□□□□ -0.34
VPS8-222ENST00000475580 J3QRK9 145 aa12.92□□□□□ -0.34
VPS8-222ENST00000475580 XRCC3O43542 346 aa12.92□□□□□ -0.34
VPS8-222ENST00000475580 TUSC2O75896 110 aa12.92□□□□□ -0.34
VPS8-222ENST00000475580 IGLV2-14P01704 120 aa12.92□□□□□ -0.34
VPS8-222ENST00000475580 CRYGBP07316 175 aa12.92□□□□□ -0.34
VPS8-222ENST00000475580 OR5H8P0DN80 308 aa12.92□□□□□ -0.34
VPS8-222ENST00000475580 IGKV1-13P0DP09 117 aa12.92□□□□□ -0.34
VPS8-222ENST00000475580 SLC6A1P30531 599 aa12.92□□□□□ -0.34
VPS8-222ENST00000475580 CDX1P47902 265 aaPredicted RBP12.92□□□□□ -0.34
VPS8-222ENST00000475580 KIAA0141Q14154 515 aaPredicted RBP12.92□□□□□ -0.34
VPS8-222ENST00000475580 PLGLAQ15195 96 aa12.92□□□□□ -0.34
VPS8-222ENST00000475580 UBE2NLQ5JXB2 153 aa12.92□□□□□ -0.34
VPS8-222ENST00000475580 BVESQ8NE79 360 aa12.92□□□□□ -0.34
VPS8-222ENST00000475580 BEST4Q8NFU0 473 aa12.92□□□□□ -0.34
VPS8-222ENST00000475580 RAX2Q96IS3 184 aa12.92□□□□□ -0.34
VPS8-222ENST00000475580 KLK15Q9H2R5 256 aa12.92□□□□□ -0.34
VPS8-222ENST00000475580 SRRM4A7MD48 611 aaKnown RBP12.91□□□□□ -0.34
VPS8-222ENST00000475580 SLC25A17O43808 307 aa12.91□□□□□ -0.34
VPS8-222ENST00000475580 SOX15O60248 233 aa12.91□□□□□ -0.34
VPS8-222ENST00000475580 CA2P00918 260 aa12.91□□□□□ -0.34
VPS8-222ENST00000475580 MYCNOSP40205 109 aa12.91□□□□□ -0.34
VPS8-222ENST00000475580 LUMP51884 338 aaPredicted RBP12.91□□□□□ -0.34
VPS8-222ENST00000475580 SSBP2P81877 361 aaPredicted RBP12.91□□□□□ -0.34
VPS8-222ENST00000475580 TMEM177Q53S58 311 aa12.91□□□□□ -0.34
VPS8-222ENST00000475580 ZNF645Q8N7E2 425 aa12.91□□□□□ -0.34
VPS8-222ENST00000475580 SAMD12Q8N8I0 201 aa12.91□□□□□ -0.34
VPS8-222ENST00000475580 SNAPC3Q92966 411 aa12.91□□□□□ -0.34
VPS8-222ENST00000475580 KCTD12Q96CX2 325 aaKnown RBP12.91□□□□□ -0.34
VPS8-222ENST00000475580 DUX3Q96PT4 197 aa12.91□□□□□ -0.34
VPS8-222ENST00000475580 CLCC1Q96S66 551 aa12.91□□□□□ -0.34
VPS8-222ENST00000475580 NUBP2Q9Y5Y2 271 aa12.91□□□□□ -0.34
VPS8-222ENST00000475580 ARPC1BO15143 372 aaKnown RBP12.9□□□□□ -0.34
VPS8-222ENST00000475580 PRB2P02812 416 aaPredicted RBP12.9□□□□□ -0.34
VPS8-222ENST00000475580 LGALS7P47929 136 aa12.9□□□□□ -0.34
VPS8-222ENST00000475580 TAGLNQ01995 201 aaKnown RBP12.9□□□□□ -0.34
VPS8-222ENST00000475580 EIF4EBP1Q13541 118 aaPredicted RBP12.9□□□□□ -0.34
VPS8-222ENST00000475580 CTF1Q16619 201 aa12.9□□□□□ -0.34
VPS8-222ENST00000475580 ECSCRQ19T08 205 aa12.9□□□□□ -0.34
VPS8-222ENST00000475580 MRGPRG-AS1Q2M3A8 158 aa12.9□□□□□ -0.34
VPS8-222ENST00000475580 DEFB136Q30KP8 78 aa12.9□□□□□ -0.34
VPS8-222ENST00000475580 ZNF562Q6V9R5 426 aa12.9□□□□□ -0.34
VPS8-222ENST00000475580 ANKRD13BQ86YJ7 626 aa12.9□□□□□ -0.34
VPS8-222ENST00000475580 S100A16Q96FQ6 103 aaKnown RBP12.9□□□□□ -0.34
VPS8-222ENST00000475580 RCC1LQ96I51 464 aaKnown RBP12.9□□□□□ -0.34
VPS8-222ENST00000475580 ADTRPQ96IZ2 230 aa12.9□□□□□ -0.34
VPS8-222ENST00000475580 FAM103A1Q9BTL3 118 aaKnown RBP12.9□□□□□ -0.34
VPS8-222ENST00000475580 RBMX2Q9Y388 322 aaKnown RBP12.9□□□□□ -0.34
VPS8-222ENST00000475580 MEIS3P1A6NDR6 274 aa12.89□□□□□ -0.35
VPS8-222ENST00000475580 GABARAPO95166 117 aa12.89□□□□□ -0.35
VPS8-222ENST00000475580 EIF4EP06730 217 aaKnown RBP12.89□□□□□ -0.35
VPS8-222ENST00000475580 FCER2P06734 321 aa12.89□□□□□ -0.35
VPS8-222ENST00000475580 TAS2R20P59543 309 aa12.89□□□□□ -0.35
VPS8-222ENST00000475580 PJVKQ0ZLH3 352 aa12.89□□□□□ -0.35
VPS8-222ENST00000475580 RTL8BQ17RB0 113 aa12.89□□□□□ -0.35
VPS8-222ENST00000475580 FOXB2Q5VYV0 432 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms