RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 GRNP28799 593 aaKnown RBP12.71□□□□□ -0.38
RPUSD3-215ENST00000475470 UBE2KP61086 200 aa12.71□□□□□ -0.38
RPUSD3-215ENST00000475470 ZNF273Q14593 569 aa12.71□□□□□ -0.38
RPUSD3-215ENST00000475470 RPL39P5Q59GN2 51 aa12.71□□□□□ -0.38
RPUSD3-215ENST00000475470 BTNL8Q6UX41 500 aa12.71□□□□□ -0.38
RPUSD3-215ENST00000475470 LRRC46Q96FV0 321 aa12.71□□□□□ -0.38
RPUSD3-215ENST00000475470 ATP5SQ99766 215 aa12.71□□□□□ -0.38
RPUSD3-215ENST00000475470 ABHD14AQ9BUJ0 271 aa12.71□□□□□ -0.38
RPUSD3-215ENST00000475470 SPTA1P02549 2419 aa12.71□□□□□ -0.38
RPUSD3-215ENST00000475470 ITGB1BP1O14713 200 aa12.7□□□□□ -0.38
RPUSD3-215ENST00000475470 RAB29O14966 203 aa12.7□□□□□ -0.38
RPUSD3-215ENST00000475470 FCGR3BO75015 233 aa12.7□□□□□ -0.38
RPUSD3-215ENST00000475470 CAMLGP49069 296 aa12.7□□□□□ -0.38
RPUSD3-215ENST00000475470 RAB5CP51148 216 aa12.7□□□□□ -0.38
RPUSD3-215ENST00000475470 TAS2R30P59541 319 aa12.7□□□□□ -0.38
RPUSD3-215ENST00000475470 DEFA5Q01523 94 aa12.7□□□□□ -0.38
RPUSD3-215ENST00000475470 TNFRSF9Q07011 255 aa12.7□□□□□ -0.38
RPUSD3-215ENST00000475470 TCF23Q7RTU1 214 aa12.7□□□□□ -0.38
RPUSD3-215ENST00000475470 ZCCHC14Q8WYQ9 949 aaKnown RBP12.7□□□□□ -0.38
RPUSD3-215ENST00000475470 SLC25A10Q9UBX3 287 aaPredicted RBP12.7□□□□□ -0.38
RPUSD3-215ENST00000475470 CACFD1Q9UGQ2 172 aa12.7□□□□□ -0.38
RPUSD3-215ENST00000475470 TANC2Q9HCD6 1990 aa12.7□□□□□ -0.38
RPUSD3-215ENST00000475470 DSCAML1Q8TD84 2053 aa12.7□□□□□ -0.38
RPUSD3-215ENST00000475470 ROS1P08922 2347 aa12.7□□□□□ -0.38
RPUSD3-215ENST00000475470 hADV38S2A0JD32 116 aa12.7□□□□□ -0.38
RPUSD3-215ENST00000475470 SLC31A2O15432 143 aa12.7□□□□□ -0.38
RPUSD3-215ENST00000475470 DFFBO76075 338 aa12.7□□□□□ -0.38
RPUSD3-215ENST00000475470 ATP6V0CP27449 155 aa12.7□□□□□ -0.38
RPUSD3-215ENST00000475470 ZNF616Q08AN1 781 aa12.7□□□□□ -0.38
RPUSD3-215ENST00000475470 TMEM182Q6ZP80 229 aaPredicted RBP12.7□□□□□ -0.38
RPUSD3-215ENST00000475470 OR2G3Q8NGZ4 309 aa12.7□□□□□ -0.38
RPUSD3-215ENST00000475470 CORO2AQ92828 525 aa12.7□□□□□ -0.38
RPUSD3-215ENST00000475470 RBKSQ9H477 322 aa12.7□□□□□ -0.38
RPUSD3-215ENST00000475470 TREM1Q9NP99 234 aa12.7□□□□□ -0.38
RPUSD3-215ENST00000475470 IDI2-AS1Q9NZ38 188 aa12.7□□□□□ -0.38
RPUSD3-215ENST00000475470 CISD1Q9NZ45 108 aaKnown RBP12.7□□□□□ -0.38
RPUSD3-215ENST00000475470 HSPB7Q9UBY9 170 aa12.7□□□□□ -0.38
RPUSD3-215ENST00000475470 A0A1W2PPE3 182 aa12.69□□□□□ -0.38
RPUSD3-215ENST00000475470 MARCH11A6NNE9 402 aa12.69□□□□□ -0.38
RPUSD3-215ENST00000475470 B9A039 149 aa12.69□□□□□ -0.38
RPUSD3-215ENST00000475470 RBMXL2O75526 392 aaKnown RBP12.69□□□□□ -0.38
RPUSD3-215ENST00000475470 PLAUP00749 431 aa12.69□□□□□ -0.38
RPUSD3-215ENST00000475470 ID4P47928 161 aa12.69□□□□□ -0.38
RPUSD3-215ENST00000475470 SRSF3P84103 164 aaKnown RBP12.69□□□□□ -0.38
RPUSD3-215ENST00000475470 ADORA2A-AS1P86434 159 aa12.69□□□□□ -0.38
RPUSD3-215ENST00000475470 EFNB3Q15768 340 aa12.69□□□□□ -0.38
RPUSD3-215ENST00000475470 MIDNQ504T8 468 aa12.69□□□□□ -0.38
RPUSD3-215ENST00000475470 CT45A1Q5HYN5 189 aa12.69□□□□□ -0.38
RPUSD3-215ENST00000475470 SPANXN5Q5MJ07 72 aa12.69□□□□□ -0.38
RPUSD3-215ENST00000475470 UTF1Q5T230 341 aa12.69□□□□□ -0.38
RPUSD3-215ENST00000475470 NBEAQ8NFP9 2946 aa12.69□□□□□ -0.38
RPUSD3-215ENST00000475470 CT45A3Q8NHU0 189 aa12.69□□□□□ -0.38
RPUSD3-215ENST00000475470 CA5BP1Q8WTZ4 195 aa12.69□□□□□ -0.38
RPUSD3-215ENST00000475470 PRELID1Q9Y255 219 aa12.69□□□□□ -0.38
RPUSD3-215ENST00000475470 PRELID3BQ9Y3B1 194 aa12.69□□□□□ -0.38
RPUSD3-215ENST00000475470 STRAPQ9Y3F4 350 aaKnown RBP12.69□□□□□ -0.38
RPUSD3-215ENST00000475470 TMEM218A2RU14 115 aa12.69□□□□□ -0.38
RPUSD3-215ENST00000475470 AGPAT2O15120 278 aa12.69□□□□□ -0.38
RPUSD3-215ENST00000475470 METTL15P1P0C7V9 234 aa12.69□□□□□ -0.38
RPUSD3-215ENST00000475470 UNQ6494/PRO21346Q6UXR6 183 aa12.69□□□□□ -0.38
RPUSD3-215ENST00000475470 R3HDM4Q96D70 268 aa12.69□□□□□ -0.38
RPUSD3-215ENST00000475470 GNPNAT1Q96EK6 184 aaPredicted RBP12.69□□□□□ -0.38
RPUSD3-215ENST00000475470 S1PR3Q99500 378 aa12.69□□□□□ -0.38
RPUSD3-215ENST00000475470 ADGRG4Q8IZF6 3080 aa12.69□□□□□ -0.38
RPUSD3-215ENST00000475470 C1QL1O75973 258 aa12.68□□□□□ -0.38
RPUSD3-215ENST00000475470 HPRT1P00492 218 aa12.68□□□□□ -0.38
RPUSD3-215ENST00000475470 IFNA5P01569 189 aa12.68□□□□□ -0.38
RPUSD3-215ENST00000475470 SFTPCP11686 197 aa12.68□□□□□ -0.38
RPUSD3-215ENST00000475470 FHITP49789 147 aa12.68□□□□□ -0.38
RPUSD3-215ENST00000475470 LY6DQ14210 128 aa12.68□□□□□ -0.38
RPUSD3-215ENST00000475470 SLC25A24Q6NUK1 477 aa12.68□□□□□ -0.38
RPUSD3-215ENST00000475470 TMEM231Q9H6L2 316 aa12.68□□□□□ -0.38
RPUSD3-215ENST00000475470 LINC00574Q9H8X3 128 aa12.68□□□□□ -0.38
RPUSD3-215ENST00000475470 C19orf12Q9NSK7 152 aa12.68□□□□□ -0.38
RPUSD3-215ENST00000475470 GAB2Q9UQC2 676 aa12.68□□□□□ -0.38
RPUSD3-215ENST00000475470 LINC00312Q9Y6C7 94 aa12.68□□□□□ -0.38
RPUSD3-215ENST00000475470 TSPAN15O95858 294 aa12.68□□□□□ -0.38
RPUSD3-215ENST00000475470 HBG1P69891 147 aa12.68□□□□□ -0.38
RPUSD3-215ENST00000475470 HBG2P69892 147 aa12.68□□□□□ -0.38
RPUSD3-215ENST00000475470 TMEM30BQ3MIR4 351 aa12.68□□□□□ -0.38
RPUSD3-215ENST00000475470 RPL31P62899 125 aaKnown RBP12.67□□□□□ -0.38
RPUSD3-215ENST00000475470 CDSNQ15517 529 aa12.67□□□□□ -0.38
RPUSD3-215ENST00000475470 PRAMEF5Q5TYX0 476 aa12.67□□□□□ -0.38
RPUSD3-215ENST00000475470 LYG1Q8N1E2 194 aa12.67□□□□□ -0.38
RPUSD3-215ENST00000475470 LYPD6BQ8NI32 183 aa12.67□□□□□ -0.38
RPUSD3-215ENST00000475470 TSNAXQ99598 290 aaKnown RBP12.67□□□□□ -0.38
RPUSD3-215ENST00000475470 PRORYQ9H606 182 aa12.67□□□□□ -0.38
RPUSD3-215ENST00000475470 RFNGQ9Y644 331 aa12.67□□□□□ -0.38
RPUSD3-215ENST00000475470 IGHV1-69-2A0A0G2JMI3 117 aa12.67□□□□□ -0.38
RPUSD3-215ENST00000475470 UMAD1C9J7I0 102 aa12.67□□□□□ -0.38
RPUSD3-215ENST00000475470 GNG10P50151 68 aa12.67□□□□□ -0.38
RPUSD3-215ENST00000475470 MEF2CQ06413 473 aaPredicted RBP12.67□□□□□ -0.38
RPUSD3-215ENST00000475470 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.67□□□□□ -0.38
RPUSD3-215ENST00000475470 FAM213BQ8TBF2 198 aa12.67□□□□□ -0.38
RPUSD3-215ENST00000475470 GAL3ST2Q9H3Q3 398 aa12.67□□□□□ -0.38
RPUSD3-215ENST00000475470 FAM96BQ9Y3D0 163 aa12.67□□□□□ -0.38
RPUSD3-215ENST00000475470 SAA2-SAA4A0A096LPE2 208 aa12.66□□□□□ -0.38
RPUSD3-215ENST00000475470 FAM74A7A6NL05 159 aa12.66□□□□□ -0.38
RPUSD3-215ENST00000475470 RBFOX2O43251 390 aaKnown RBP eCLIP12.66□□□□□ -0.38
RPUSD3-215ENST00000475470 NDUFB3O43676 98 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms