RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 RBMY1BA6NDE4 496 aaKnown RBP15.48■□□□□ 0.07
VPS36-203ENST00000475375 RBMY1EA6NEQ0 496 aaKnown RBP15.48■□□□□ 0.07
VPS36-203ENST00000475375 M0R1X1 148 aa15.48■□□□□ 0.07
VPS36-203ENST00000475375 PROP1O75360 226 aa15.48■□□□□ 0.07
VPS36-203ENST00000475375 CD7P09564 240 aa15.48■□□□□ 0.07
VPS36-203ENST00000475375 RBMY1DP0C7P1 496 aaKnown RBP15.48■□□□□ 0.07
VPS36-203ENST00000475375 TAS2R43P59537 309 aa15.48■□□□□ 0.07
VPS36-203ENST00000475375 CD300EQ496F6 205 aaPredicted RBP15.48■□□□□ 0.07
VPS36-203ENST00000475375 WFDC10AQ9H1F0 79 aa15.48■□□□□ 0.07
VPS36-203ENST00000475375 SLC35D1Q9NTN3 355 aa15.48■□□□□ 0.07
VPS36-203ENST00000475375 AIREO43918 545 aa15.47■□□□□ 0.07
VPS36-203ENST00000475375 MAPK3P27361 379 aaPredicted RBP15.47■□□□□ 0.07
VPS36-203ENST00000475375 HLA-DRB3P79483 266 aa15.47■□□□□ 0.07
VPS36-203ENST00000475375 SSBP2P81877 361 aaPredicted RBP15.47■□□□□ 0.07
VPS36-203ENST00000475375 GUCA2BQ16661 112 aa15.47■□□□□ 0.07
VPS36-203ENST00000475375 LAX1Q8IWV1 398 aa15.47■□□□□ 0.07
VPS36-203ENST00000475375 NICN1Q9BSH3 213 aa15.47■□□□□ 0.07
VPS36-203ENST00000475375 HDHD3Q9BSH5 251 aaPredicted RBP15.47■□□□□ 0.07
VPS36-203ENST00000475375 OR11H12B2RN74 326 aa15.46■□□□□ 0.07
VPS36-203ENST00000475375 CELP19835 753 aa15.46■□□□□ 0.07
VPS36-203ENST00000475375 MECP2P51608 486 aaKnown RBP15.46■□□□□ 0.07
VPS36-203ENST00000475375 KCNG3Q8TAE7 436 aa15.46■□□□□ 0.07
VPS36-203ENST00000475375 HARBI1Q96MB7 349 aa15.46■□□□□ 0.07
VPS36-203ENST00000475375 RIMS4Q9H426 269 aaPredicted RBP15.46■□□□□ 0.07
VPS36-203ENST00000475375 KCNK15Q9H427 330 aa15.46■□□□□ 0.07
VPS36-203ENST00000475375 IGLV2-23P01705 113 aa15.45■□□□□ 0.06
VPS36-203ENST00000475375 CBX3Q13185 183 aa15.45■□□□□ 0.06
VPS36-203ENST00000475375 ZNF485Q8NCK3 441 aa15.45■□□□□ 0.06
VPS36-203ENST00000475375 THRSPQ92748 146 aa15.45■□□□□ 0.06
VPS36-203ENST00000475375 GGHQ92820 318 aa15.45■□□□□ 0.06
VPS36-203ENST00000475375 AK3Q9UIJ7 227 aa15.45■□□□□ 0.06
VPS36-203ENST00000475375 FRAS1Q86XX4 4008 aa15.45■□□□□ 0.06
VPS36-203ENST00000475375 CXorf65A6NEN9 183 aa15.44■□□□□ 0.06
VPS36-203ENST00000475375 ZNF785A8K8V0 405 aa15.44■□□□□ 0.06
VPS36-203ENST00000475375 MPPED1O15442 326 aa15.44■□□□□ 0.06
VPS36-203ENST00000475375 RBMXL2O75526 392 aaKnown RBP15.44■□□□□ 0.06
VPS36-203ENST00000475375 SCTP09683 121 aa15.44■□□□□ 0.06
VPS36-203ENST00000475375 PMS2P11Q13670 270 aa15.44■□□□□ 0.06
VPS36-203ENST00000475375 EXOSC2Q13868 293 aaKnown RBP15.44■□□□□ 0.06
VPS36-203ENST00000475375 GLT8D1Q68CQ7 371 aa15.44■□□□□ 0.06
VPS36-203ENST00000475375 PTX4Q96A99 478 aa15.44■□□□□ 0.06
VPS36-203ENST00000475375 TM2D1Q9BX74 207 aa15.44■□□□□ 0.06
VPS36-203ENST00000475375 MGAT4AQ9UM21 535 aa15.44■□□□□ 0.06
VPS36-203ENST00000475375 TRBV6-6A0A0A6YYG2 114 aa15.43■□□□□ 0.06
VPS36-203ENST00000475375 MSGN1A6NI15 193 aa15.43■□□□□ 0.06
VPS36-203ENST00000475375 BMPR1BO00238 502 aa15.43■□□□□ 0.06
VPS36-203ENST00000475375 SHOXO15266 292 aa15.43■□□□□ 0.06
VPS36-203ENST00000475375 RHOGP84095 191 aa15.43■□□□□ 0.06
VPS36-203ENST00000475375 ST3GAL4Q11206 333 aa15.43■□□□□ 0.06
VPS36-203ENST00000475375 UNC119Q13432 240 aa15.43■□□□□ 0.06
VPS36-203ENST00000475375 ST6GALNAC5Q9BVH7 336 aa15.43■□□□□ 0.06
VPS36-203ENST00000475375 SMPD3Q9NY59 655 aaPredicted RBP15.43■□□□□ 0.06
VPS36-203ENST00000475375 TUSC2O75896 110 aa15.42■□□□□ 0.06
VPS36-203ENST00000475375 CRYGBP07316 175 aa15.42■□□□□ 0.06
VPS36-203ENST00000475375 OR9G9P0C7N8 305 aa15.42■□□□□ 0.06
VPS36-203ENST00000475375 ATP5G2Q06055 141 aa15.42■□□□□ 0.06
VPS36-203ENST00000475375 INSL4Q14641 139 aa15.42■□□□□ 0.06
VPS36-203ENST00000475375 RBM48Q5RL73 367 aaKnown RBP15.42■□□□□ 0.06
VPS36-203ENST00000475375 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.42■□□□□ 0.06
VPS36-203ENST00000475375 ADAD2Q8NCV1 583 aaKnown RBP15.42■□□□□ 0.06
VPS36-203ENST00000475375 DDB2Q92466 427 aa15.42■□□□□ 0.06
VPS36-203ENST00000475375 Q9N2K0 584 aa15.42■□□□□ 0.06
VPS36-203ENST00000475375 AKIP1Q9NQ31 210 aa15.42■□□□□ 0.06
VPS36-203ENST00000475375 RDH8Q9NYR8 311 aa15.42■□□□□ 0.06
VPS36-203ENST00000475375 A0A0A6YYD4 124 aa15.41■□□□□ 0.06
VPS36-203ENST00000475375 EFCAB10A6NFE3 127 aa15.41■□□□□ 0.06
VPS36-203ENST00000475375 FAM223BA6NKX1 122 aa15.41■□□□□ 0.06
VPS36-203ENST00000475375 MYL12BO14950 172 aa15.41■□□□□ 0.06
VPS36-203ENST00000475375 SOCS1O15524 211 aa15.41■□□□□ 0.06
VPS36-203ENST00000475375 PRH1P02810 166 aa15.41■□□□□ 0.06
VPS36-203ENST00000475375 TNXAQ16473 311 aa15.41■□□□□ 0.06
VPS36-203ENST00000475375 DEFB114Q30KQ6 69 aa15.41■□□□□ 0.06
VPS36-203ENST00000475375 C1orf100Q5SVJ3 147 aa15.41■□□□□ 0.06
VPS36-203ENST00000475375 TTC23Q5W5X9 447 aa15.41■□□□□ 0.06
VPS36-203ENST00000475375 FAM223AQ8IWN6 122 aa15.41■□□□□ 0.06
VPS36-203ENST00000475375 C12orf4Q9NQ89 552 aa15.41■□□□□ 0.06
VPS36-203ENST00000475375 FAM53CQ9NYF3 392 aa15.41■□□□□ 0.06
VPS36-203ENST00000475375 CD1AP06126 327 aa15.4■□□□□ 0.06
VPS36-203ENST00000475375 RTL8BQ17RB0 113 aa15.4■□□□□ 0.06
VPS36-203ENST00000475375 ACSM3Q53FZ2 586 aa15.4■□□□□ 0.06
VPS36-203ENST00000475375 SLC16A13Q7RTY0 426 aa15.4■□□□□ 0.06
VPS36-203ENST00000475375 C10orf67Q8IYJ2 551 aa15.4■□□□□ 0.06
VPS36-203ENST00000475375 CYGBQ8WWM9 190 aa15.4■□□□□ 0.06
VPS36-203ENST00000475375 WDR89Q96FK6 387 aaPredicted RBP15.4■□□□□ 0.06
VPS36-203ENST00000475375 URM1Q9BTM9 101 aaKnown RBP15.4■□□□□ 0.06
VPS36-203ENST00000475375 OR2D2Q9H210 308 aa15.4■□□□□ 0.06
VPS36-203ENST00000475375 ZNF230Q9UIE0 474 aaPredicted RBP15.4■□□□□ 0.06
VPS36-203ENST00000475375 IGKV1-6A0A0C4DH72 117 aa15.39■□□□□ 0.05
VPS36-203ENST00000475375 TMEM14DPA8MWL7 114 aa15.39■□□□□ 0.05
VPS36-203ENST00000475375 FOLR2P14207 255 aa15.39■□□□□ 0.05
VPS36-203ENST00000475375 WNT4P56705 351 aa15.39■□□□□ 0.05
VPS36-203ENST00000475375 VMA21Q3ZAQ7 101 aa15.39■□□□□ 0.05
VPS36-203ENST00000475375 LRRTM1Q86UE6 522 aa15.39■□□□□ 0.05
VPS36-203ENST00000475375 PQLC1Q8N2U9 271 aa15.39■□□□□ 0.05
VPS36-203ENST00000475375 ACOT12Q8WYK0 555 aa15.39■□□□□ 0.05
VPS36-203ENST00000475375 CMSS1Q9BQ75 279 aaKnown RBP15.39■□□□□ 0.05
VPS36-203ENST00000475375 SELENOKQ9Y6D0 94 aa15.39■□□□□ 0.05
VPS36-203ENST00000475375 C2orf70A6NJV1 201 aa15.38■□□□□ 0.05
VPS36-203ENST00000475375 SRRM4A7MD48 611 aaKnown RBP15.38■□□□□ 0.05
VPS36-203ENST00000475375 BPNT1O95861 308 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms