RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 CFHR3Q02985 330 aa12.54□□□□□ -0.4
ITGB1-210ENST00000474568 BEAN1Q3B7T3 259 aa12.54□□□□□ -0.4
ITGB1-210ENST00000474568 CNIH2Q6PI25 160 aa12.54□□□□□ -0.4
ITGB1-210ENST00000474568 ETV3LQ6ZN32 361 aa12.54□□□□□ -0.4
ITGB1-210ENST00000474568 PDPNQ86YL7 162 aa12.54□□□□□ -0.4
ITGB1-210ENST00000474568 CROCCP3Q8IVE0 287 aa12.54□□□□□ -0.4
ITGB1-210ENST00000474568 FAM103A1Q9BTL3 118 aaKnown RBP12.54□□□□□ -0.4
ITGB1-210ENST00000474568 AUNIPQ9H7T9 357 aa12.54□□□□□ -0.4
ITGB1-210ENST00000474568 TPSG1Q9NRR2 321 aa12.54□□□□□ -0.4
ITGB1-210ENST00000474568 ZFP57Q9NU63 452 aa12.54□□□□□ -0.4
ITGB1-210ENST00000474568 ANXA10Q9UJ72 324 aa12.54□□□□□ -0.4
ITGB1-210ENST00000474568 FBXO7Q9Y3I1 522 aa12.54□□□□□ -0.4
ITGB1-210ENST00000474568 NOTCH1P46531 2555 aa12.54□□□□□ -0.4
ITGB1-210ENST00000474568 TRAV41A0A0B4J266 112 aa12.53□□□□□ -0.4
ITGB1-210ENST00000474568 SLC25A17O43808 307 aa12.53□□□□□ -0.4
ITGB1-210ENST00000474568 LUMP51884 338 aaPredicted RBP12.53□□□□□ -0.4
ITGB1-210ENST00000474568 ARPC4P59998 168 aa12.53□□□□□ -0.4
ITGB1-210ENST00000474568 CX3CL1P78423 397 aa12.53□□□□□ -0.4
ITGB1-210ENST00000474568 FOXE3Q13461 319 aa12.53□□□□□ -0.4
ITGB1-210ENST00000474568 DEFB136Q30KP8 78 aa12.53□□□□□ -0.4
ITGB1-210ENST00000474568 PDLIM3Q53GG5 364 aaPredicted RBP12.53□□□□□ -0.4
ITGB1-210ENST00000474568 UBE2NLQ5JXB2 153 aa12.53□□□□□ -0.4
ITGB1-210ENST00000474568 ZNF695Q8IW36 515 aa12.53□□□□□ -0.4
ITGB1-210ENST00000474568 BEST4Q8NFU0 473 aa12.53□□□□□ -0.4
ITGB1-210ENST00000474568 FLYWCH2Q96CP2 140 aaKnown RBP12.53□□□□□ -0.4
ITGB1-210ENST00000474568 TSNAXQ99598 290 aaKnown RBP12.53□□□□□ -0.4
ITGB1-210ENST00000474568 A0A0A6YYH2 397 aa12.52□□□□□ -0.41
ITGB1-210ENST00000474568 IGKV1D-13A0A0B4J2D9 117 aa12.52□□□□□ -0.41
ITGB1-210ENST00000474568 A6NJ64 397 aa12.52□□□□□ -0.41
ITGB1-210ENST00000474568 CA2P00918 260 aa12.52□□□□□ -0.41
ITGB1-210ENST00000474568 IGHG4P01861 327 aa12.52□□□□□ -0.41
ITGB1-210ENST00000474568 ELANEP08246 267 aa12.52□□□□□ -0.41
ITGB1-210ENST00000474568 CTXN2P0C2S0 81 aa12.52□□□□□ -0.41
ITGB1-210ENST00000474568 OR5H8P0DN80 308 aa12.52□□□□□ -0.41
ITGB1-210ENST00000474568 IGKV1-13P0DP09 117 aa12.52□□□□□ -0.41
ITGB1-210ENST00000474568 THBS3P49746 956 aa12.52□□□□□ -0.41
ITGB1-210ENST00000474568 RAB25P57735 213 aa12.52□□□□□ -0.41
ITGB1-210ENST00000474568 GNB1P62873 340 aa12.52□□□□□ -0.41
ITGB1-210ENST00000474568 HOGA1Q86XE5 327 aa12.52□□□□□ -0.41
ITGB1-210ENST00000474568 MRPL41Q8IXM3 137 aaKnown RBP12.52□□□□□ -0.41
ITGB1-210ENST00000474568 CASTOR1Q8WTX7 329 aa12.52□□□□□ -0.41
ITGB1-210ENST00000474568 SLC25A46Q96AG3 418 aa12.52□□□□□ -0.41
ITGB1-210ENST00000474568 S100A16Q96FQ6 103 aaKnown RBP12.52□□□□□ -0.41
ITGB1-210ENST00000474568 HARBI1Q96MB7 349 aa12.52□□□□□ -0.41
ITGB1-210ENST00000474568 KLK15Q9H2R5 256 aa12.52□□□□□ -0.41
ITGB1-210ENST00000474568 COMMD3Q9UBI1 195 aa12.52□□□□□ -0.41
ITGB1-210ENST00000474568 OR2W1Q9Y3N9 320 aa12.52□□□□□ -0.41
ITGB1-210ENST00000474568 LINC00473A8K010 186 aa12.51□□□□□ -0.41
ITGB1-210ENST00000474568 TUSC2O75896 110 aa12.51□□□□□ -0.41
ITGB1-210ENST00000474568 EIF4EP06730 217 aaKnown RBP12.51□□□□□ -0.41
ITGB1-210ENST00000474568 PPIFP30405 207 aaKnown RBP12.51□□□□□ -0.41
ITGB1-210ENST00000474568 DUTP33316 252 aaKnown RBP12.51□□□□□ -0.41
ITGB1-210ENST00000474568 TAS2R20P59543 309 aa12.51□□□□□ -0.41
ITGB1-210ENST00000474568 CBX3Q13185 183 aa12.51□□□□□ -0.41
ITGB1-210ENST00000474568 OR2B11Q5JQS5 317 aa12.51□□□□□ -0.41
ITGB1-210ENST00000474568 TMEM69Q5SWH9 247 aa12.51□□□□□ -0.41
ITGB1-210ENST00000474568 GPR107Q5VW38 600 aa12.51□□□□□ -0.41
ITGB1-210ENST00000474568 ZNF660Q6AZW8 331 aaPredicted RBP12.51□□□□□ -0.41
ITGB1-210ENST00000474568 TMEM65Q6PI78 240 aa12.51□□□□□ -0.41
ITGB1-210ENST00000474568 LINC00482Q8N8I6 264 aa12.51□□□□□ -0.41
ITGB1-210ENST00000474568 WFDC9Q8NEX5 89 aa12.51□□□□□ -0.41
ITGB1-210ENST00000474568 RAX2Q96IS3 184 aa12.51□□□□□ -0.41
ITGB1-210ENST00000474568 OR5B12Q96R08 314 aa12.51□□□□□ -0.41
ITGB1-210ENST00000474568 RNF5Q99942 180 aa12.51□□□□□ -0.41
ITGB1-210ENST00000474568 A0A1W2PN81 502 aa12.5□□□□□ -0.41
ITGB1-210ENST00000474568 SHOXO15266 292 aa12.5□□□□□ -0.41
ITGB1-210ENST00000474568 XRCC3O43542 346 aa12.5□□□□□ -0.41
ITGB1-210ENST00000474568 TMEM127O75204 238 aa12.5□□□□□ -0.41
ITGB1-210ENST00000474568 SPDEFO95238 335 aa12.5□□□□□ -0.41
ITGB1-210ENST00000474568 CRYZL1O95825 349 aa12.5□□□□□ -0.41
ITGB1-210ENST00000474568 IGLV2-23P01705 113 aa12.5□□□□□ -0.41
ITGB1-210ENST00000474568 HLA-DQB1P01920 261 aa12.5□□□□□ -0.41
ITGB1-210ENST00000474568 EGR2P11161 476 aaPredicted RBP12.5□□□□□ -0.41
ITGB1-210ENST00000474568 PSMB8P28062 276 aa12.5□□□□□ -0.41
ITGB1-210ENST00000474568 CHRNA7P36544 502 aa12.5□□□□□ -0.41
ITGB1-210ENST00000474568 PJVKQ0ZLH3 352 aa12.5□□□□□ -0.41
ITGB1-210ENST00000474568 RTL8BQ17RB0 113 aa12.5□□□□□ -0.41
ITGB1-210ENST00000474568 PPP1R27Q86WC6 154 aa12.5□□□□□ -0.41
ITGB1-210ENST00000474568 ZNF645Q8N7E2 425 aa12.5□□□□□ -0.41
ITGB1-210ENST00000474568 GRPEL2Q8TAA5 225 aa12.5□□□□□ -0.41
ITGB1-210ENST00000474568 MRPS26Q9BYN8 205 aaKnown RBP12.5□□□□□ -0.41
ITGB1-210ENST00000474568 IFT46Q9NQC8 304 aa12.5□□□□□ -0.41
ITGB1-210ENST00000474568 NOTCH3Q9UM47 2321 aa12.5□□□□□ -0.41
ITGB1-210ENST00000474568 SRRM4A7MD48 611 aaKnown RBP12.49□□□□□ -0.41
ITGB1-210ENST00000474568 AADACP22760 399 aa12.49□□□□□ -0.41
ITGB1-210ENST00000474568 FCGR2CP31995 323 aa12.49□□□□□ -0.41
ITGB1-210ENST00000474568 MYCNOSP40205 109 aa12.49□□□□□ -0.41
ITGB1-210ENST00000474568 RPL30P62888 115 aaKnown RBP12.49□□□□□ -0.41
ITGB1-210ENST00000474568 UNQ5815/PRO19632Q6UWF5 114 aa12.49□□□□□ -0.41
ITGB1-210ENST00000474568 RNF152Q8N8N0 203 aa12.49□□□□□ -0.41
ITGB1-210ENST00000474568 SECTM1Q8WVN6 248 aa12.49□□□□□ -0.41
ITGB1-210ENST00000474568 DDB2Q92466 427 aa12.49□□□□□ -0.41
ITGB1-210ENST00000474568 SNAPC3Q92966 411 aa12.49□□□□□ -0.41
ITGB1-210ENST00000474568 GPHA2Q96T91 129 aa12.49□□□□□ -0.41
ITGB1-210ENST00000474568 GNB4Q9HAV0 340 aa12.49□□□□□ -0.41
ITGB1-210ENST00000474568 ZNF580Q9UK33 172 aa12.49□□□□□ -0.41
ITGB1-210ENST00000474568 MRPS7Q9Y2R9 242 aaKnown RBP12.49□□□□□ -0.41
ITGB1-210ENST00000474568 RBMX2Q9Y388 322 aaKnown RBP12.49□□□□□ -0.41
ITGB1-210ENST00000474568 PLXNB1O43157 2135 aa12.49□□□□□ -0.41
ITGB1-210ENST00000474568 PRKDCP78527 4128 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms