RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 SMIM30A4D0T7 59 aa14.36□□□□□ -0.11
COL7A1-209ENST00000474432 M0R1X1 148 aa14.36□□□□□ -0.11
COL7A1-209ENST00000474432 ARPC1BO15143 372 aaKnown RBP14.36□□□□□ -0.11
COL7A1-209ENST00000474432 MRPS14O60783 128 aaKnown RBP14.36□□□□□ -0.11
COL7A1-209ENST00000474432 CA2P00918 260 aa14.36□□□□□ -0.11
COL7A1-209ENST00000474432 IGLV2-23P01705 113 aa14.36□□□□□ -0.11
COL7A1-209ENST00000474432 CRYGBP07316 175 aa14.36□□□□□ -0.11
COL7A1-209ENST00000474432 SERPINB10P48595 397 aa14.36□□□□□ -0.11
COL7A1-209ENST00000474432 PPP1R27Q86WC6 154 aa14.36□□□□□ -0.11
COL7A1-209ENST00000474432 PDPNQ86YL7 162 aa14.36□□□□□ -0.11
COL7A1-209ENST00000474432 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.36□□□□□ -0.11
COL7A1-209ENST00000474432 SDHAF2Q9NX18 166 aa14.36□□□□□ -0.11
COL7A1-209ENST00000474432 A3GALT2U3KPV4 340 aa14.36□□□□□ -0.11
COL7A1-209ENST00000474432 BET1O15155 118 aa14.35□□□□□ -0.11
COL7A1-209ENST00000474432 SPDEFO95238 335 aa14.35□□□□□ -0.11
COL7A1-209ENST00000474432 DIRAS3O95661 229 aa14.35□□□□□ -0.11
COL7A1-209ENST00000474432 OR8U8P0C7N1 319 aa14.35□□□□□ -0.11
COL7A1-209ENST00000474432 OR8U9P0C7N5 309 aa14.35□□□□□ -0.11
COL7A1-209ENST00000474432 MYL9P24844 172 aa14.35□□□□□ -0.11
COL7A1-209ENST00000474432 RANBP1P43487 201 aa14.35□□□□□ -0.11
COL7A1-209ENST00000474432 PLGLAQ15195 96 aa14.35□□□□□ -0.11
COL7A1-209ENST00000474432 MRGPRG-AS1Q2M3A8 158 aa14.35□□□□□ -0.11
COL7A1-209ENST00000474432 ZNF260Q3ZCT1 412 aa14.35□□□□□ -0.11
COL7A1-209ENST00000474432 AKIRIN2Q53H80 203 aa14.35□□□□□ -0.11
COL7A1-209ENST00000474432 Q6ZS49 121 aa14.35□□□□□ -0.11
COL7A1-209ENST00000474432 TCTEX1D1Q8N7M0 179 aa14.35□□□□□ -0.11
COL7A1-209ENST00000474432 LFNGQ8NES3 379 aa14.35□□□□□ -0.11
COL7A1-209ENST00000474432 DCUN1D4Q92564 292 aa14.35□□□□□ -0.11
COL7A1-209ENST00000474432 ZMAT5Q9UDW3 170 aaKnown RBP14.35□□□□□ -0.11
COL7A1-209ENST00000474432 TENM3Q9P273 2699 aa14.34□□□□□ -0.11
COL7A1-209ENST00000474432 A0A075B6Q4 140 aa14.34□□□□□ -0.11
COL7A1-209ENST00000474432 SLC25A17O43808 307 aa14.34□□□□□ -0.11
COL7A1-209ENST00000474432 FGF9P31371 208 aaPredicted RBP14.34□□□□□ -0.11
COL7A1-209ENST00000474432 ECI1P42126 302 aa14.34□□□□□ -0.11
COL7A1-209ENST00000474432 RPS16P62249 146 aaKnown RBP14.34□□□□□ -0.11
COL7A1-209ENST00000474432 CD69Q07108 199 aa14.34□□□□□ -0.11
COL7A1-209ENST00000474432 PJVKQ0ZLH3 352 aa14.34□□□□□ -0.11
COL7A1-209ENST00000474432 UNQ5815/PRO19632Q6UWF5 114 aa14.34□□□□□ -0.11
COL7A1-209ENST00000474432 DLX4Q92988 240 aaPredicted RBP14.34□□□□□ -0.11
COL7A1-209ENST00000474432 TSNAXQ99598 290 aaKnown RBP14.34□□□□□ -0.11
COL7A1-209ENST00000474432 OR2D2Q9H210 308 aa14.34□□□□□ -0.11
COL7A1-209ENST00000474432 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.34□□□□□ -0.11
COL7A1-209ENST00000474432 TXNL4BQ9NX01 149 aaKnown RBP14.34□□□□□ -0.11
COL7A1-209ENST00000474432 TNCP24821 2201 aa14.34□□□□□ -0.11
COL7A1-209ENST00000474432 IGHV4OR15-8A0A075B7B6 117 aa14.33□□□□□ -0.12
COL7A1-209ENST00000474432 A0A087WW49 117 aa14.33□□□□□ -0.12
COL7A1-209ENST00000474432 SRRM4A7MD48 611 aaKnown RBP14.33□□□□□ -0.12
COL7A1-209ENST00000474432 LGALS1P09382 135 aaKnown RBP14.33□□□□□ -0.12
COL7A1-209ENST00000474432 GADD45AP24522 165 aa14.33□□□□□ -0.12
COL7A1-209ENST00000474432 SLURP1P55000 103 aa14.33□□□□□ -0.12
COL7A1-209ENST00000474432 TMEM267Q0VDI3 215 aaPredicted RBP14.33□□□□□ -0.12
COL7A1-209ENST00000474432 SRSF7Q16629 238 aaKnown RBP eCLIP14.33□□□□□ -0.12
COL7A1-209ENST00000474432 ACTBL2Q562R1 376 aa14.33□□□□□ -0.12
COL7A1-209ENST00000474432 OR10J5Q8NHC4 309 aa14.33□□□□□ -0.12
COL7A1-209ENST00000474432 FLYWCH2Q96CP2 140 aaKnown RBP14.33□□□□□ -0.12
COL7A1-209ENST00000474432 RHOVQ96L33 236 aa14.33□□□□□ -0.12
COL7A1-209ENST00000474432 SLC35D1Q9NTN3 355 aa14.33□□□□□ -0.12
COL7A1-209ENST00000474432 APOA2P02652 100 aa14.32□□□□□ -0.12
COL7A1-209ENST00000474432 H1FOOQ8IZA3 346 aaPredicted RBP14.32□□□□□ -0.12
COL7A1-209ENST00000474432 ABHD5Q8WTS1 349 aa14.32□□□□□ -0.12
COL7A1-209ENST00000474432 DDB2Q92466 427 aa14.32□□□□□ -0.12
COL7A1-209ENST00000474432 MS4A10Q96PG2 267 aa14.32□□□□□ -0.12
COL7A1-209ENST00000474432 KMT2CQ8NEZ4 4911 aaKnown RBP14.31□□□□□ -0.12
COL7A1-209ENST00000474432 METTL21EPA6NDL7 271 aa14.31□□□□□ -0.12
COL7A1-209ENST00000474432 NOTOA8MTQ0 251 aa14.31□□□□□ -0.12
COL7A1-209ENST00000474432 OVOL1O14753 267 aa14.31□□□□□ -0.12
COL7A1-209ENST00000474432 IGHV3-11P01762 117 aa14.31□□□□□ -0.12
COL7A1-209ENST00000474432 INSL3P51460 131 aa14.31□□□□□ -0.12
COL7A1-209ENST00000474432 MRPS15P82914 257 aaKnown RBP14.31□□□□□ -0.12
COL7A1-209ENST00000474432 FXYD3Q14802 87 aa14.31□□□□□ -0.12
COL7A1-209ENST00000474432 TMEM177Q53S58 311 aa14.31□□□□□ -0.12
COL7A1-209ENST00000474432 PYHIN1Q6K0P9 492 aa14.31□□□□□ -0.12
COL7A1-209ENST00000474432 BVESQ8NE79 360 aa14.31□□□□□ -0.12
COL7A1-209ENST00000474432 ARPC1AQ92747 370 aa14.31□□□□□ -0.12
COL7A1-209ENST00000474432 ATG5Q9H1Y0 275 aa14.31□□□□□ -0.12
COL7A1-209ENST00000474432 STUB1Q9UNE7 303 aa14.31□□□□□ -0.12
COL7A1-209ENST00000474432 ZNF256Q9Y2P7 627 aaPredicted RBP14.31□□□□□ -0.12
COL7A1-209ENST00000474432 LINC00473A8K010 186 aa14.3□□□□□ -0.12
COL7A1-209ENST00000474432 LINC01619G3V211 115 aa14.3□□□□□ -0.12
COL7A1-209ENST00000474432 PSMB9P28065 219 aa14.3□□□□□ -0.12
COL7A1-209ENST00000474432 LGALS7P47929 136 aa14.3□□□□□ -0.12
COL7A1-209ENST00000474432 DCTN2Q13561 401 aaKnown RBP14.3□□□□□ -0.12
COL7A1-209ENST00000474432 ARFRP1Q13795 201 aa14.3□□□□□ -0.12
COL7A1-209ENST00000474432 CDNFQ49AH0 187 aa14.3□□□□□ -0.12
COL7A1-209ENST00000474432 YTHDF1Q9BYJ9 559 aaKnown RBP14.3□□□□□ -0.12
COL7A1-209ENST00000474432 STAB2Q8WWQ8 2551 aa14.29□□□□□ -0.12
COL7A1-209ENST00000474432 NBEAL2Q6ZNJ1 2754 aa14.29□□□□□ -0.12
COL7A1-209ENST00000474432 DTYMKP23919 212 aa14.29□□□□□ -0.12
COL7A1-209ENST00000474432 DUTP33316 252 aaKnown RBP14.29□□□□□ -0.12
COL7A1-209ENST00000474432 TPPP2P59282 170 aa14.29□□□□□ -0.12
COL7A1-209ENST00000474432 GRPEL2Q8TAA5 225 aa14.29□□□□□ -0.12
COL7A1-209ENST00000474432 FCGR1BQ92637 280 aa14.29□□□□□ -0.12
COL7A1-209ENST00000474432 OR51E2Q9H255 320 aa14.29□□□□□ -0.12
COL7A1-209ENST00000474432 SSX5O60225 188 aa14.28□□□□□ -0.12
COL7A1-209ENST00000474432 HSPB1P04792 205 aaKnown RBP14.28□□□□□ -0.12
COL7A1-209ENST00000474432 CLEC2LP0C7M8 214 aa14.28□□□□□ -0.12
COL7A1-209ENST00000474432 HACD4Q5VWC8 232 aa14.28□□□□□ -0.12
COL7A1-209ENST00000474432 ACSM6Q6P461 480 aa14.28□□□□□ -0.12
COL7A1-209ENST00000474432 ZNF429Q86V71 674 aa14.28□□□□□ -0.12
COL7A1-209ENST00000474432 TPRA1Q86W33 373 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms