RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-205ENST00000474256 A3GALT2U3KPV4 340 aa12.23□□□□□ -0.45
CDPF1-205ENST00000474256 COL7A1Q02388 2944 aa12.23□□□□□ -0.45
CDPF1-205ENST00000474256 BET1O15155 118 aa12.22□□□□□ -0.45
CDPF1-205ENST00000474256 CA2P00918 260 aa12.22□□□□□ -0.45
CDPF1-205ENST00000474256 APOA2P02652 100 aa12.22□□□□□ -0.45
CDPF1-205ENST00000474256 GSTT2P0CG29 244 aa12.22□□□□□ -0.45
CDPF1-205ENST00000474256 GSTT2BP0CG30 244 aa12.22□□□□□ -0.45
CDPF1-205ENST00000474256 HIST1H1DP16402 221 aaKnown RBP12.22□□□□□ -0.45
CDPF1-205ENST00000474256 RAB3BP20337 219 aa12.22□□□□□ -0.45
CDPF1-205ENST00000474256 GADD45AP24522 165 aa12.22□□□□□ -0.45
CDPF1-205ENST00000474256 MYL9P24844 172 aa12.22□□□□□ -0.45
CDPF1-205ENST00000474256 GABARAPL2P60520 117 aa12.22□□□□□ -0.45
CDPF1-205ENST00000474256 RPS16P62249 146 aaKnown RBP12.22□□□□□ -0.45
CDPF1-205ENST00000474256 ACTBL2Q562R1 376 aa12.22□□□□□ -0.45
CDPF1-205ENST00000474256 NR2C2APQ86WQ0 139 aa12.22□□□□□ -0.45
CDPF1-205ENST00000474256 LFNGQ8NES3 379 aa12.22□□□□□ -0.45
CDPF1-205ENST00000474256 ABHD5Q8WTS1 349 aa12.22□□□□□ -0.45
CDPF1-205ENST00000474256 CASTOR1Q8WTX7 329 aa12.22□□□□□ -0.45
CDPF1-205ENST00000474256 DCUN1D4Q92564 292 aa12.22□□□□□ -0.45
CDPF1-205ENST00000474256 FLYWCH2Q96CP2 140 aaKnown RBP12.22□□□□□ -0.45
CDPF1-205ENST00000474256 PRR25Q96S07 402 aa12.22□□□□□ -0.45
CDPF1-205ENST00000474256 A0A0B4J203 849 aa12.21□□□□□ -0.45
CDPF1-205ENST00000474256 ERICH4A6NGS2 130 aa12.21□□□□□ -0.45
CDPF1-205ENST00000474256 M0R1X1 148 aa12.21□□□□□ -0.45
CDPF1-205ENST00000474256 LGALS1P09382 135 aaKnown RBP12.21□□□□□ -0.45
CDPF1-205ENST00000474256 OR8U9P0C7N5 309 aa12.21□□□□□ -0.45
CDPF1-205ENST00000474256 SRSF7Q16629 238 aaKnown RBP eCLIP12.21□□□□□ -0.45
CDPF1-205ENST00000474256 UBE2UQ5VVX9 321 aa12.21□□□□□ -0.45
CDPF1-205ENST00000474256 C22orf42Q6IC83 251 aa12.21□□□□□ -0.45
CDPF1-205ENST00000474256 UNQ5815/PRO19632Q6UWF5 114 aa12.21□□□□□ -0.45
CDPF1-205ENST00000474256 OR10J5Q8NHC4 309 aa12.21□□□□□ -0.45
CDPF1-205ENST00000474256 OR2D2Q9H210 308 aa12.21□□□□□ -0.45
CDPF1-205ENST00000474256 SLC35D1Q9NTN3 355 aa12.21□□□□□ -0.45
CDPF1-205ENST00000474256 SDHAF2Q9NX18 166 aa12.21□□□□□ -0.45
CDPF1-205ENST00000474256 ZNF230Q9UIE0 474 aaPredicted RBP12.21□□□□□ -0.45
CDPF1-205ENST00000474256 ZNF256Q9Y2P7 627 aaPredicted RBP12.21□□□□□ -0.45
CDPF1-205ENST00000474256 METTL21EPA6NDL7 271 aa12.2□□□□□ -0.46
CDPF1-205ENST00000474256 LINC01619G3V211 115 aa12.2□□□□□ -0.46
CDPF1-205ENST00000474256 OVOL1O14753 267 aa12.2□□□□□ -0.46
CDPF1-205ENST00000474256 ARPC1BO15143 372 aaKnown RBP12.2□□□□□ -0.46
CDPF1-205ENST00000474256 SLC25A17O43808 307 aa12.2□□□□□ -0.46
CDPF1-205ENST00000474256 IGLV2-23P01705 113 aa12.2□□□□□ -0.46
CDPF1-205ENST00000474256 CRYGBP07316 175 aa12.2□□□□□ -0.46
CDPF1-205ENST00000474256 LGALS7P47929 136 aa12.2□□□□□ -0.46
CDPF1-205ENST00000474256 SSBP2P81877 361 aaPredicted RBP12.2□□□□□ -0.46
CDPF1-205ENST00000474256 FXYD3Q14802 87 aa12.2□□□□□ -0.46
CDPF1-205ENST00000474256 Q6ZS49 121 aa12.2□□□□□ -0.46
CDPF1-205ENST00000474256 ZNF429Q86V71 674 aa12.2□□□□□ -0.46
CDPF1-205ENST00000474256 MAFIPQ8WZ33 124 aa12.2□□□□□ -0.46
CDPF1-205ENST00000474256 ARPC1AQ92747 370 aa12.2□□□□□ -0.46
CDPF1-205ENST00000474256 DLX4Q92988 240 aaPredicted RBP12.2□□□□□ -0.46
CDPF1-205ENST00000474256 C5orf30Q96GV9 206 aa12.2□□□□□ -0.46
CDPF1-205ENST00000474256 SLA2Q9H6Q3 261 aa12.2□□□□□ -0.46
CDPF1-205ENST00000474256 A0A075B6Q4 140 aa12.19□□□□□ -0.46
CDPF1-205ENST00000474256 IGHV4OR15-8A0A075B7B6 117 aa12.19□□□□□ -0.46
CDPF1-205ENST00000474256 A0A087WW49 117 aa12.19□□□□□ -0.46
CDPF1-205ENST00000474256 NHLRC4P0CG21 123 aaPredicted RBP12.19□□□□□ -0.46
CDPF1-205ENST00000474256 CD40LGP29965 261 aa12.19□□□□□ -0.46
CDPF1-205ENST00000474256 FGF9P31371 208 aaPredicted RBP12.19□□□□□ -0.46
CDPF1-205ENST00000474256 SLURP1P55000 103 aa12.19□□□□□ -0.46
CDPF1-205ENST00000474256 TAGLNQ01995 201 aaKnown RBP12.19□□□□□ -0.46
CDPF1-205ENST00000474256 SPARTQ8N0X7 666 aa12.19□□□□□ -0.46
CDPF1-205ENST00000474256 RHOVQ96L33 236 aa12.19□□□□□ -0.46
CDPF1-205ENST00000474256 MS4A10Q96PG2 267 aa12.19□□□□□ -0.46
CDPF1-205ENST00000474256 CENPOQ9BU64 300 aa12.19□□□□□ -0.46
CDPF1-205ENST00000474256 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.19□□□□□ -0.46
CDPF1-205ENST00000474256 IGKV1D-8A0A087WSZ0 117 aa12.18□□□□□ -0.46
CDPF1-205ENST00000474256 HSPB1P04792 205 aaKnown RBP12.18□□□□□ -0.46
CDPF1-205ENST00000474256 TPPP2P59282 170 aa12.18□□□□□ -0.46
CDPF1-205ENST00000474256 PJVKQ0ZLH3 352 aa12.18□□□□□ -0.46
CDPF1-205ENST00000474256 ARFRP1Q13795 201 aa12.18□□□□□ -0.46
CDPF1-205ENST00000474256 ARL6IP1Q15041 203 aa12.18□□□□□ -0.46
CDPF1-205ENST00000474256 H1FOOQ8IZA3 346 aaPredicted RBP12.18□□□□□ -0.46
CDPF1-205ENST00000474256 GRPEL2Q8TAA5 225 aa12.18□□□□□ -0.46
CDPF1-205ENST00000474256 ATG5Q9H1Y0 275 aa12.18□□□□□ -0.46
CDPF1-205ENST00000474256 TXNL4BQ9NX01 149 aaKnown RBP12.18□□□□□ -0.46
CDPF1-205ENST00000474256 ELF5Q9UKW6 265 aaPredicted RBP12.18□□□□□ -0.46
CDPF1-205ENST00000474256 SRRM4A7MD48 611 aaKnown RBP12.17□□□□□ -0.46
CDPF1-205ENST00000474256 NOTOA8MTQ0 251 aa12.17□□□□□ -0.46
CDPF1-205ENST00000474256 H3BUA1 57 aa12.17□□□□□ -0.46
CDPF1-205ENST00000474256 SAP30O75446 220 aa12.17□□□□□ -0.46
CDPF1-205ENST00000474256 ATP6V1G2O95670 118 aa12.17□□□□□ -0.46
CDPF1-205ENST00000474256 IGHV3-11P01762 117 aa12.17□□□□□ -0.46
CDPF1-205ENST00000474256 DTYMKP23919 212 aa12.17□□□□□ -0.46
CDPF1-205ENST00000474256 TALDO1P37837 337 aa12.17□□□□□ -0.46
CDPF1-205ENST00000474256 TMEM177Q53S58 311 aa12.17□□□□□ -0.46
CDPF1-205ENST00000474256 ACSM6Q6P461 480 aa12.17□□□□□ -0.46
CDPF1-205ENST00000474256 POC5Q8NA72 575 aa12.17□□□□□ -0.46
CDPF1-205ENST00000474256 DDB2Q92466 427 aa12.17□□□□□ -0.46
CDPF1-205ENST00000474256 FCGR1BQ92637 280 aa12.17□□□□□ -0.46
CDPF1-205ENST00000474256 HARBI1Q96MB7 349 aa12.17□□□□□ -0.46
CDPF1-205ENST00000474256 WWC2-AS2Q96NR7 200 aa12.17□□□□□ -0.46
CDPF1-205ENST00000474256 GINS4Q9BRT9 223 aa12.17□□□□□ -0.46
CDPF1-205ENST00000474256 SMIM30A4D0T7 59 aa12.16□□□□□ -0.46
CDPF1-205ENST00000474256 BRI3O95415 125 aa12.16□□□□□ -0.46
CDPF1-205ENST00000474256 TRGV3P03979 118 aa12.16□□□□□ -0.46
CDPF1-205ENST00000474256 RRASP10301 218 aa12.16□□□□□ -0.46
CDPF1-205ENST00000474256 PSMB9P28065 219 aa12.16□□□□□ -0.46
CDPF1-205ENST00000474256 DUTP33316 252 aaKnown RBP12.16□□□□□ -0.46
CDPF1-205ENST00000474256 RTL8BQ17RB0 113 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms