RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 METTL1Q9UBP6 276 aaKnown RBP8.74□□□□□ -1.01
CKS1B-206ENST00000474215 IGKV1D-8A0A087WSZ0 117 aa8.73□□□□□ -1.01
CKS1B-206ENST00000474215 CTXN2P0C2S0 81 aa8.73□□□□□ -1.01
CKS1B-206ENST00000474215 TAGLNQ01995 201 aaKnown RBP8.73□□□□□ -1.01
CKS1B-206ENST00000474215 KIAA0141Q14154 515 aaPredicted RBP8.73□□□□□ -1.01
CKS1B-206ENST00000474215 ZNF260Q3ZCT1 412 aa8.73□□□□□ -1.01
CKS1B-206ENST00000474215 IDNKQ5T6J7 187 aa8.73□□□□□ -1.01
CKS1B-206ENST00000474215 ZNF562Q6V9R5 426 aa8.73□□□□□ -1.01
CKS1B-206ENST00000474215 H1FOOQ8IZA3 346 aaPredicted RBP8.73□□□□□ -1.01
CKS1B-206ENST00000474215 TSPAN14Q8NG11 270 aa8.73□□□□□ -1.01
CKS1B-206ENST00000474215 MYOZ3Q8TDC0 251 aa8.73□□□□□ -1.01
CKS1B-206ENST00000474215 C4orf3Q8WVX3 66 aa8.73□□□□□ -1.01
CKS1B-206ENST00000474215 UBE2E2Q96LR5 201 aa8.73□□□□□ -1.01
CKS1B-206ENST00000474215 CLCC1Q96S66 551 aa8.73□□□□□ -1.01
CKS1B-206ENST00000474215 GPR61Q9BZJ8 451 aa8.73□□□□□ -1.01
CKS1B-206ENST00000474215 AURKAIP1Q9NWT8 199 aaPredicted RBP8.73□□□□□ -1.01
CKS1B-206ENST00000474215 SDHAF2Q9NX18 166 aa8.73□□□□□ -1.01
CKS1B-206ENST00000474215 RHBDL2Q9NX52 303 aa8.73□□□□□ -1.01
CKS1B-206ENST00000474215 FBXO7Q9Y3I1 522 aa8.73□□□□□ -1.01
CKS1B-206ENST00000474215 RBM7Q9Y580 266 aaKnown RBP8.73□□□□□ -1.01
CKS1B-206ENST00000474215 NUBP2Q9Y5Y2 271 aa8.73□□□□□ -1.01
CKS1B-206ENST00000474215 ETV7Q9Y603 341 aa8.73□□□□□ -1.01
CKS1B-206ENST00000474215 A0A087WXM4 84 aa8.72□□□□□ -1.01
CKS1B-206ENST00000474215 TMEM235A6NFC5 223 aa8.72□□□□□ -1.01
CKS1B-206ENST00000474215 TMEM127O75204 238 aa8.72□□□□□ -1.01
CKS1B-206ENST00000474215 SPDEFO95238 335 aa8.72□□□□□ -1.01
CKS1B-206ENST00000474215 TNFAIP8O95379 198 aa8.72□□□□□ -1.01
CKS1B-206ENST00000474215 EGR2P11161 476 aaPredicted RBP8.72□□□□□ -1.01
CKS1B-206ENST00000474215 LGALS7P47929 136 aa8.72□□□□□ -1.01
CKS1B-206ENST00000474215 RAB9AP51151 201 aa8.72□□□□□ -1.01
CKS1B-206ENST00000474215 CRIP2P52943 208 aaPredicted RBP8.72□□□□□ -1.01
CKS1B-206ENST00000474215 GNG2P59768 71 aa8.72□□□□□ -1.01
CKS1B-206ENST00000474215 NDPQ00604 133 aa8.72□□□□□ -1.01
CKS1B-206ENST00000474215 TMEM267Q0VDI3 215 aaPredicted RBP8.72□□□□□ -1.01
CKS1B-206ENST00000474215 DEFB136Q30KP8 78 aa8.72□□□□□ -1.01
CKS1B-206ENST00000474215 TIMM50Q3ZCQ8 353 aa8.72□□□□□ -1.01
CKS1B-206ENST00000474215 C19orf54Q5BKX5 351 aa8.72□□□□□ -1.01
CKS1B-206ENST00000474215 PPP1R27Q86WC6 154 aa8.72□□□□□ -1.01
CKS1B-206ENST00000474215 ZNF491Q8N8L2 437 aa8.72□□□□□ -1.01
CKS1B-206ENST00000474215 OR5H6Q8NGV6 325 aa8.72□□□□□ -1.01
CKS1B-206ENST00000474215 MRAPQ8TCY5 172 aa8.72□□□□□ -1.01
CKS1B-206ENST00000474215 NUDCD2Q8WVJ2 157 aa8.72□□□□□ -1.01
CKS1B-206ENST00000474215 VCX3AQ9NNX9 186 aa8.72□□□□□ -1.01
CKS1B-206ENST00000474215 SLC35D1Q9NTN3 355 aa8.72□□□□□ -1.01
CKS1B-206ENST00000474215 TRAV18A0A075B6X5 111 aa8.71□□□□□ -1.02
CKS1B-206ENST00000474215 SLC25A17O43808 307 aa8.71□□□□□ -1.02
CKS1B-206ENST00000474215 AIREO43918 545 aa8.71□□□□□ -1.02
CKS1B-206ENST00000474215 SSX5O60225 188 aa8.71□□□□□ -1.02
CKS1B-206ENST00000474215 SOX15O60248 233 aa8.71□□□□□ -1.02
CKS1B-206ENST00000474215 RRASP10301 218 aa8.71□□□□□ -1.02
CKS1B-206ENST00000474215 HOXD3P31249 432 aaPredicted RBP8.71□□□□□ -1.02
CKS1B-206ENST00000474215 RAB25P57735 213 aa8.71□□□□□ -1.02
CKS1B-206ENST00000474215 KRTAP10-11P60412 298 aa8.71□□□□□ -1.02
CKS1B-206ENST00000474215 EGFEM1PQ0D2K5 195 aa8.71□□□□□ -1.02
CKS1B-206ENST00000474215 CBX3Q13185 183 aa8.71□□□□□ -1.02
CKS1B-206ENST00000474215 ECSCRQ19T08 205 aa8.71□□□□□ -1.02
CKS1B-206ENST00000474215 AKIRIN2Q53H80 203 aa8.71□□□□□ -1.02
CKS1B-206ENST00000474215 CNIH2Q6PI25 160 aa8.71□□□□□ -1.02
CKS1B-206ENST00000474215 CROCCP3Q8IVE0 287 aa8.71□□□□□ -1.02
CKS1B-206ENST00000474215 TCTEX1D1Q8N7M0 179 aa8.71□□□□□ -1.02
CKS1B-206ENST00000474215 ABHD5Q8WTS1 349 aa8.71□□□□□ -1.02
CKS1B-206ENST00000474215 DPF1Q92782 380 aa8.71□□□□□ -1.02
CKS1B-206ENST00000474215 SLC25A38Q96DW6 304 aa8.71□□□□□ -1.02
CKS1B-206ENST00000474215 C5orf30Q96GV9 206 aa8.71□□□□□ -1.02
CKS1B-206ENST00000474215 ADTRPQ96IZ2 230 aa8.71□□□□□ -1.02
CKS1B-206ENST00000474215 DIABLOQ9NR28 239 aa8.71□□□□□ -1.02
CKS1B-206ENST00000474215 ANXA10Q9UJ72 324 aa8.71□□□□□ -1.02
CKS1B-206ENST00000474215 FOXA2Q9Y261 457 aaPredicted RBP8.71□□□□□ -1.02
CKS1B-206ENST00000474215 VSIG4Q9Y279 399 aa8.71□□□□□ -1.02
CKS1B-206ENST00000474215 OR2W1Q9Y3N9 320 aa8.71□□□□□ -1.02
CKS1B-206ENST00000474215 A3GALT2U3KPV4 340 aa8.71□□□□□ -1.02
CKS1B-206ENST00000474215 A0A0A6YYH2 397 aa8.7□□□□□ -1.02
CKS1B-206ENST00000474215 A0A1W2PN81 502 aa8.7□□□□□ -1.02
CKS1B-206ENST00000474215 A6NJ64 397 aa8.7□□□□□ -1.02
CKS1B-206ENST00000474215 I3L521 148 aa8.7□□□□□ -1.02
CKS1B-206ENST00000474215 CA2P00918 260 aa8.7□□□□□ -1.02
CKS1B-206ENST00000474215 IGLV2-23P01705 113 aa8.7□□□□□ -1.02
CKS1B-206ENST00000474215 HLA-DQB1P01920 261 aa8.7□□□□□ -1.02
CKS1B-206ENST00000474215 CHRNA7P36544 502 aa8.7□□□□□ -1.02
CKS1B-206ENST00000474215 RPS19P39019 145 aaKnown RBP8.7□□□□□ -1.02
CKS1B-206ENST00000474215 LUMP51884 338 aaPredicted RBP8.7□□□□□ -1.02
CKS1B-206ENST00000474215 RUNX1Q01196 453 aa8.7□□□□□ -1.02
CKS1B-206ENST00000474215 FXYD3Q14802 87 aa8.7□□□□□ -1.02
CKS1B-206ENST00000474215 RTL8BQ17RB0 113 aa8.7□□□□□ -1.02
CKS1B-206ENST00000474215 TMEM177Q53S58 311 aa8.7□□□□□ -1.02
CKS1B-206ENST00000474215 UNQ5815/PRO19632Q6UWF5 114 aa8.7□□□□□ -1.02
CKS1B-206ENST00000474215 BVESQ8NE79 360 aa8.7□□□□□ -1.02
CKS1B-206ENST00000474215 LFNGQ8NES3 379 aa8.7□□□□□ -1.02
CKS1B-206ENST00000474215 OR11H1Q8NG94 326 aa8.7□□□□□ -1.02
CKS1B-206ENST00000474215 OR5M8Q8NGP6 311 aa8.7□□□□□ -1.02
CKS1B-206ENST00000474215 OR1N2Q8NGR9 330 aa8.7□□□□□ -1.02
CKS1B-206ENST00000474215 DDB2Q92466 427 aa8.7□□□□□ -1.02
CKS1B-206ENST00000474215 YIPF6Q96EC8 236 aa8.7□□□□□ -1.02
CKS1B-206ENST00000474215 FAM103A1Q9BTL3 118 aaKnown RBP8.7□□□□□ -1.02
CKS1B-206ENST00000474215 GNB4Q9HAV0 340 aa8.7□□□□□ -1.02
CKS1B-206ENST00000474215 TPSG1Q9NRR2 321 aa8.7□□□□□ -1.02
CKS1B-206ENST00000474215 SPATA2Q9UM82 520 aa8.7□□□□□ -1.02
CKS1B-206ENST00000474215 J3QRK9 145 aa8.69□□□□□ -1.02
CKS1B-206ENST00000474215 SHOXO15266 292 aa8.69□□□□□ -1.02
CKS1B-206ENST00000474215 SLC22A5O76082 557 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms