RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 MOSP00540 346 aa14.79□□□□□ -0.04
CCDC171-206ENST00000474193 AMY1AP04745 511 aa14.79□□□□□ -0.04
CCDC171-206ENST00000474193 AMY2AP04746 511 aa14.79□□□□□ -0.04
CCDC171-206ENST00000474193 IFNA6P05013 189 aa14.79□□□□□ -0.04
CCDC171-206ENST00000474193 ETV6P41212 452 aa14.79□□□□□ -0.04
CCDC171-206ENST00000474193 TSPAN5P62079 268 aa14.79□□□□□ -0.04
CCDC171-206ENST00000474193 EBI3Q14213 229 aa14.79□□□□□ -0.04
CCDC171-206ENST00000474193 LINC00299Q6ZSB3 139 aa14.79□□□□□ -0.04
CCDC171-206ENST00000474193 SLC35E3Q7Z769 313 aa14.79□□□□□ -0.04
CCDC171-206ENST00000474193 H1FOOQ8IZA3 346 aaPredicted RBP14.79□□□□□ -0.04
CCDC171-206ENST00000474193 C5orf56Q8N8D9 126 aa14.79□□□□□ -0.04
CCDC171-206ENST00000474193 OR8H1Q8NGG4 311 aa14.79□□□□□ -0.04
CCDC171-206ENST00000474193 EAF1Q96JC9 268 aaPredicted RBP14.79□□□□□ -0.04
CCDC171-206ENST00000474193 GON7Q9BXV9 100 aa14.79□□□□□ -0.04
CCDC171-206ENST00000474193 V9GYH0 126 aa14.79□□□□□ -0.04
CCDC171-206ENST00000474193 GSTZ1O43708 216 aaPredicted RBP14.78□□□□□ -0.04
CCDC171-206ENST00000474193 OR8U9P0C7N5 309 aa14.78□□□□□ -0.04
CCDC171-206ENST00000474193 TBPP20226 339 aa14.78□□□□□ -0.04
CCDC171-206ENST00000474193 NFYAP23511 347 aaPredicted RBP14.78□□□□□ -0.04
CCDC171-206ENST00000474193 FCGR2CP31995 323 aa14.78□□□□□ -0.04
CCDC171-206ENST00000474193 HRH1P35367 487 aa14.78□□□□□ -0.04
CCDC171-206ENST00000474193 GPR12P47775 334 aa14.78□□□□□ -0.04
CCDC171-206ENST00000474193 LUMP51884 338 aaPredicted RBP14.78□□□□□ -0.04
CCDC171-206ENST00000474193 TAS2R19P59542 299 aa14.78□□□□□ -0.04
CCDC171-206ENST00000474193 C1QL4Q86Z23 238 aa14.78□□□□□ -0.04
CCDC171-206ENST00000474193 LYSMD2Q8IV50 215 aa14.78□□□□□ -0.04
CCDC171-206ENST00000474193 Q8N402 240 aa14.78□□□□□ -0.04
CCDC171-206ENST00000474193 OR8U1Q8NH10 309 aa14.78□□□□□ -0.04
CCDC171-206ENST00000474193 ST6GALNAC6Q969X2 333 aa14.78□□□□□ -0.04
CCDC171-206ENST00000474193 RASL11BQ9BPW5 248 aa14.78□□□□□ -0.04
CCDC171-206ENST00000474193 ZNF107Q9UII5 783 aaPredicted RBP14.78□□□□□ -0.04
CCDC171-206ENST00000474193 RNF150Q9ULK6 438 aa14.78□□□□□ -0.04
CCDC171-206ENST00000474193 OR2W1Q9Y3N9 320 aa14.78□□□□□ -0.04
CCDC171-206ENST00000474193 VWFP04275 2813 aa14.78□□□□□ -0.04
CCDC171-206ENST00000474193 MEGF8Q7Z7M0 2845 aa14.78□□□□□ -0.04
CCDC171-206ENST00000474193 PF4P02776 101 aa14.77□□□□□ -0.05
CCDC171-206ENST00000474193 CD33P20138 364 aa14.77□□□□□ -0.05
CCDC171-206ENST00000474193 RFX2P48378 723 aa14.77□□□□□ -0.05
CCDC171-206ENST00000474193 ZNF137PP52743 207 aa14.77□□□□□ -0.05
CCDC171-206ENST00000474193 HERV-K104P61576 105 aa14.77□□□□□ -0.05
CCDC171-206ENST00000474193 ZNF45Q02386 682 aa14.77□□□□□ -0.05
CCDC171-206ENST00000474193 RNASE10Q5GAN6 216 aaKnown RBP14.77□□□□□ -0.05
CCDC171-206ENST00000474193 OVCH2Q7RTZ1 564 aa14.77□□□□□ -0.05
CCDC171-206ENST00000474193 TMEM17Q86X19 198 aa14.77□□□□□ -0.05
CCDC171-206ENST00000474193 TMEM229BQ8NBD8 167 aa14.77□□□□□ -0.05
CCDC171-206ENST00000474193 OR6F1Q8NGZ6 308 aa14.77□□□□□ -0.05
CCDC171-206ENST00000474193 THAP7Q9BT49 309 aaPredicted RBP14.77□□□□□ -0.05
CCDC171-206ENST00000474193 IFI27L2Q9H2X8 130 aa14.77□□□□□ -0.05
CCDC171-206ENST00000474193 J3QRK9 145 aa14.76□□□□□ -0.05
CCDC171-206ENST00000474193 LANCL1O43813 399 aa14.76□□□□□ -0.05
CCDC171-206ENST00000474193 SLC22A5O76082 557 aa14.76□□□□□ -0.05
CCDC171-206ENST00000474193 INPP1P49441 399 aa14.76□□□□□ -0.05
CCDC171-206ENST00000474193 DYRK1AQ13627 763 aa14.76□□□□□ -0.05
CCDC171-206ENST00000474193 COMMD1Q8N668 190 aa14.76□□□□□ -0.05
CCDC171-206ENST00000474193 GDPD1Q8N9F7 314 aa14.76□□□□□ -0.05
CCDC171-206ENST00000474193 GIMAP1Q8WWP7 306 aa14.76□□□□□ -0.05
CCDC171-206ENST00000474193 S100ZQ8WXG8 99 aa14.76□□□□□ -0.05
CCDC171-206ENST00000474193 ABHD14BQ96IU4 210 aa14.76□□□□□ -0.05
CCDC171-206ENST00000474193 PARP12Q9H0J9 701 aaKnown RBP14.76□□□□□ -0.05
CCDC171-206ENST00000474193 OR2D2Q9H210 308 aa14.76□□□□□ -0.05
CCDC171-206ENST00000474193 LIN7CQ9NUP9 197 aaKnown RBP14.76□□□□□ -0.05
CCDC171-206ENST00000474193 NOTCH1P46531 2555 aa14.75□□□□□ -0.05
CCDC171-206ENST00000474193 SAA2-SAA4A0A096LPE2 208 aa14.75□□□□□ -0.05
CCDC171-206ENST00000474193 IGHG2P01859 326 aa14.75□□□□□ -0.05
CCDC171-206ENST00000474193 SAA2P0DJI9 122 aaPredicted RBP14.75□□□□□ -0.05
CCDC171-206ENST00000474193 AP3S2P59780 193 aa14.75□□□□□ -0.05
CCDC171-206ENST00000474193 FBLN7Q53RD9 439 aa14.75□□□□□ -0.05
CCDC171-206ENST00000474193 FAM71F2Q6NXP2 309 aa14.75□□□□□ -0.05
CCDC171-206ENST00000474193 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.75□□□□□ -0.05
CCDC171-206ENST00000474193 AGMATQ9BSE5 352 aa14.75□□□□□ -0.05
CCDC171-206ENST00000474193 ZNF2Q9BSG1 426 aaPredicted RBP14.75□□□□□ -0.05
CCDC171-206ENST00000474193 AP4M1O00189 453 aa14.74□□□□□ -0.05
CCDC171-206ENST00000474193 RAB3DO95716 219 aa14.74□□□□□ -0.05
CCDC171-206ENST00000474193 PPYP01298 95 aa14.74□□□□□ -0.05
CCDC171-206ENST00000474193 CD3DP04234 171 aa14.74□□□□□ -0.05
CCDC171-206ENST00000474193 AADACP22760 399 aa14.74□□□□□ -0.05
CCDC171-206ENST00000474193 MEF2DQ14814 521 aa14.74□□□□□ -0.05
CCDC171-206ENST00000474193 ZNF79Q15937 498 aa14.74□□□□□ -0.05
CCDC171-206ENST00000474193 TRIQKQ629K1 86 aa14.74□□□□□ -0.05
CCDC171-206ENST00000474193 STEAP1BQ6NZ63 245 aa14.74□□□□□ -0.05
CCDC171-206ENST00000474193 DHRS11Q6UWP2 260 aa14.74□□□□□ -0.05
CCDC171-206ENST00000474193 ZNF833PQ6ZTB9 187 aa14.74□□□□□ -0.05
CCDC171-206ENST00000474193 ZFP57Q9NU63 452 aa14.74□□□□□ -0.05
CCDC171-206ENST00000474193 RBMX2Q9Y388 322 aaKnown RBP14.74□□□□□ -0.05
CCDC171-206ENST00000474193 PLXNB1O43157 2135 aa14.74□□□□□ -0.05
CCDC171-206ENST00000474193 ADARB2-AS1A8MUL3 147 aa14.73□□□□□ -0.05
CCDC171-206ENST00000474193 G3V4G9 280 aa14.73□□□□□ -0.05
CCDC171-206ENST00000474193 M0QYG6 137 aa14.73□□□□□ -0.05
CCDC171-206ENST00000474193 TUSC2O75896 110 aa14.73□□□□□ -0.05
CCDC171-206ENST00000474193 AKAIN1P0CW23 69 aa14.73□□□□□ -0.05
CCDC171-206ENST00000474193 FXYD4P59646 89 aa14.73□□□□□ -0.05
CCDC171-206ENST00000474193 RPL39P5Q59GN2 51 aa14.73□□□□□ -0.05
CCDC171-206ENST00000474193 VAX1Q5SQQ9 334 aa14.73□□□□□ -0.05
CCDC171-206ENST00000474193 ZNF329Q86UD4 541 aa14.73□□□□□ -0.05
CCDC171-206ENST00000474193 ODF3L1Q8IXM7 274 aa14.73□□□□□ -0.05
CCDC171-206ENST00000474193 TOMM5Q8N4H5 51 aa14.73□□□□□ -0.05
CCDC171-206ENST00000474193 ZNF645Q8N7E2 425 aa14.73□□□□□ -0.05
CCDC171-206ENST00000474193 SECTM1Q8WVN6 248 aa14.73□□□□□ -0.05
CCDC171-206ENST00000474193 BORCS5Q969J3 196 aa14.73□□□□□ -0.05
CCDC171-206ENST00000474193 SRRQ9GZT4 340 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms