RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 SPG11Q96JI7 2443 aa8.38□□□□□ -1.07
PRPF38A-202ENST00000474048 DCHS2Q6V1P9 2916 aa8.37□□□□□ -1.07
PRPF38A-202ENST00000474048 TRAV40A0A0B4J280 105 aa8.37□□□□□ -1.07
PRPF38A-202ENST00000474048 OOSP1A8MZH6 123 aa8.37□□□□□ -1.07
PRPF38A-202ENST00000474048 RBMXL2O75526 392 aaKnown RBP8.37□□□□□ -1.07
PRPF38A-202ENST00000474048 HRASP01112 189 aa8.37□□□□□ -1.07
PRPF38A-202ENST00000474048 PET100P0DJ07 73 aa8.37□□□□□ -1.07
PRPF38A-202ENST00000474048 UCP1P25874 307 aa8.37□□□□□ -1.07
PRPF38A-202ENST00000474048 LPAR6P43657 344 aa8.37□□□□□ -1.07
PRPF38A-202ENST00000474048 REG1BP48304 166 aa8.37□□□□□ -1.07
PRPF38A-202ENST00000474048 SUPT4H1P63272 117 aaKnown RBP8.37□□□□□ -1.07
PRPF38A-202ENST00000474048 CD83Q01151 205 aa8.37□□□□□ -1.07
PRPF38A-202ENST00000474048 PAX2Q02962 417 aa8.37□□□□□ -1.07
PRPF38A-202ENST00000474048 PAX8Q06710 450 aa8.37□□□□□ -1.07
PRPF38A-202ENST00000474048 TMEM187Q14656 261 aa8.37□□□□□ -1.07
PRPF38A-202ENST00000474048 SMCO1Q147U7 214 aa8.37□□□□□ -1.07
PRPF38A-202ENST00000474048 MIDNQ504T8 468 aa8.37□□□□□ -1.07
PRPF38A-202ENST00000474048 LDLRAD3Q86YD5 345 aa8.37□□□□□ -1.07
PRPF38A-202ENST00000474048 C11orf42Q8N5U0 333 aa8.37□□□□□ -1.07
PRPF38A-202ENST00000474048 WFDC11Q8NEX6 87 aa8.37□□□□□ -1.07
PRPF38A-202ENST00000474048 DMBX1Q8NFW5 382 aa8.37□□□□□ -1.07
PRPF38A-202ENST00000474048 MSI2Q96DH6 328 aaKnown RBP8.37□□□□□ -1.07
PRPF38A-202ENST00000474048 GPHA2Q96T91 129 aa8.37□□□□□ -1.07
PRPF38A-202ENST00000474048 CHIAQ9BZP6 476 aa8.37□□□□□ -1.07
PRPF38A-202ENST00000474048 FAM96BQ9Y3D0 163 aa8.37□□□□□ -1.07
PRPF38A-202ENST00000474048 TMED3Q9Y3Q3 217 aa8.37□□□□□ -1.07
PRPF38A-202ENST00000474048 PTPN13Q12923 2485 aa8.37□□□□□ -1.07
PRPF38A-202ENST00000474048 RNASEK-C17orf49H0YIS7 233 aa8.36□□□□□ -1.07
PRPF38A-202ENST00000474048 NPFFO15130 113 aa8.36□□□□□ -1.07
PRPF38A-202ENST00000474048 SHOXO15266 292 aa8.36□□□□□ -1.07
PRPF38A-202ENST00000474048 RBFOX2O43251 390 aaKnown RBP eCLIP8.36□□□□□ -1.07
PRPF38A-202ENST00000474048 CRYZL1O95825 349 aa8.36□□□□□ -1.07
PRPF38A-202ENST00000474048 HPRT1P00492 218 aa8.36□□□□□ -1.07
PRPF38A-202ENST00000474048 IGLV1-47P01700 117 aa8.36□□□□□ -1.07
PRPF38A-202ENST00000474048 IGHV4-31P0DP07 118 aa8.36□□□□□ -1.07
PRPF38A-202ENST00000474048 HNF1AP20823 631 aa8.36□□□□□ -1.07
PRPF38A-202ENST00000474048 BRS3P32247 399 aa8.36□□□□□ -1.07
PRPF38A-202ENST00000474048 ZNF137PP52743 207 aa8.36□□□□□ -1.07
PRPF38A-202ENST00000474048 PRB3Q04118 309 aaPredicted RBP8.36□□□□□ -1.07
PRPF38A-202ENST00000474048 HES1Q14469 280 aa8.36□□□□□ -1.07
PRPF38A-202ENST00000474048 FCN2Q15485 313 aa8.36□□□□□ -1.07
PRPF38A-202ENST00000474048 ANKRD55Q3KP44 614 aa8.36□□□□□ -1.07
PRPF38A-202ENST00000474048 TPTE2P1Q5T6R2 138 aa8.36□□□□□ -1.07
PRPF38A-202ENST00000474048 H2BFWTQ7Z2G1 175 aa8.36□□□□□ -1.07
PRPF38A-202ENST00000474048 PDPNQ86YL7 162 aa8.36□□□□□ -1.07
PRPF38A-202ENST00000474048 FAM219AQ8IW50 185 aa8.36□□□□□ -1.07
PRPF38A-202ENST00000474048 OR8H3Q8N146 312 aa8.36□□□□□ -1.07
PRPF38A-202ENST00000474048 SLC35G3Q8N808 338 aa8.36□□□□□ -1.07
PRPF38A-202ENST00000474048 OR4P4Q8NGL7 312 aa8.36□□□□□ -1.07
PRPF38A-202ENST00000474048 GLYATL2Q8WU03 294 aa8.36□□□□□ -1.07
PRPF38A-202ENST00000474048 C1orf159Q96HA4 380 aa8.36□□□□□ -1.07
PRPF38A-202ENST00000474048 TBX15Q96SF7 602 aa8.36□□□□□ -1.07
PRPF38A-202ENST00000474048 MRPL20Q9BYC9 149 aaKnown RBP8.36□□□□□ -1.07
PRPF38A-202ENST00000474048 ZNF436Q9C0F3 470 aaPredicted RBP8.36□□□□□ -1.07
PRPF38A-202ENST00000474048 ZFP57Q9NU63 452 aa8.36□□□□□ -1.07
PRPF38A-202ENST00000474048 PRR13Q9NZ81 148 aa8.36□□□□□ -1.07
PRPF38A-202ENST00000474048 ZNRD1Q9P1U0 126 aa8.36□□□□□ -1.07
PRPF38A-202ENST00000474048 WASHC3Q9Y3C0 194 aa8.36□□□□□ -1.07
PRPF38A-202ENST00000474048 HILPDAQ9Y5L2 63 aa8.36□□□□□ -1.07
PRPF38A-202ENST00000474048 IGHV1-69DA0A0B4J2H0 117 aa8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 LINC00473A8K010 186 aa8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 ODF3BA8MYP8 253 aa8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 WRBO00258 174 aa8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 CCSO14618 274 aa8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 CDS2O95674 445 aa8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 SCGB1D2O95969 90 aa8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 IGLV2-14P01704 120 aa8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 IGHV1-69P01742 117 aa8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 GIPP09681 153 aaPredicted RBP8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 SULT1A3P0DMM9 295 aa8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 SULT1A4P0DMN0 295 aa8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 MMP9P14780 707 aa8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 NQO2P16083 231 aa8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 VDAC1P21796 283 aa8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 DLX1P56177 255 aa8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 RPS16P62249 146 aaKnown RBP8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 FGL1Q08830 312 aa8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 PLGLAQ15195 96 aa8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 SSX2Q16385 188 aa8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 IAH1Q2TAA2 248 aaPredicted RBP8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 ODF3L1Q8IXM7 274 aa8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 LRTM2Q8N967 370 aa8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 OR4C13Q8NGP0 309 aa8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 OR5M8Q8NGP6 311 aa8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 OR1S1Q8NH92 325 aa8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 FLYWCH2Q96CP2 140 aaKnown RBP8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 R3HDM4Q96D70 268 aa8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 MALSU1Q96EH3 234 aa8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 HARBI1Q96MB7 349 aa8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 TMEM56Q96MV1 263 aa8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 CLCC1Q96S66 551 aa8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 RANBP3Q9H6Z4 567 aaPredicted RBP8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 PLEKHA2Q9HB19 425 aa8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 GSKIPQ9P0R6 139 aa8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 TMEM56-RWDD3S4R434 201 aa8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 CRYBG3Q68DQ2 2970 aa8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 NAV2Q8IVL1 2488 aa8.35□□□□□ -1.07
PRPF38A-202ENST00000474048 A0A096LNT2 108 aa8.34□□□□□ -1.07
PRPF38A-202ENST00000474048 IGHV1-3A0A0C4DH29 117 aa8.34□□□□□ -1.07
PRPF38A-202ENST00000474048 MARCH11A6NNE9 402 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms