RNA–Protein interactions for RNA: ENST00000473911.1

CLIC3-201, Transcript of chloride intracellular channel 3, humanhuman

TSL 5

Gene CLIC3, Length 732 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-201ENST00000473911 FBXO7Q9Y3I1 522 aa12.12□□□□□ -0.47
CLIC3-201ENST00000473911 RBM7Q9Y580 266 aaKnown RBP12.12□□□□□ -0.47
CLIC3-201ENST00000473911 I3L521 148 aa12.11□□□□□ -0.47
CLIC3-201ENST00000473911 MFNGO00587 321 aa12.11□□□□□ -0.47
CLIC3-201ENST00000473911 RAMP3O60896 148 aa12.11□□□□□ -0.47
CLIC3-201ENST00000473911 PROP1O75360 226 aa12.11□□□□□ -0.47
CLIC3-201ENST00000473911 SPDEFO95238 335 aa12.11□□□□□ -0.47
CLIC3-201ENST00000473911 IGKV1-16P04430 117 aa12.11□□□□□ -0.47
CLIC3-201ENST00000473911 OR8U9P0C7N5 309 aa12.11□□□□□ -0.47
CLIC3-201ENST00000473911 CRIP2P52943 208 aaPredicted RBP12.11□□□□□ -0.47
CLIC3-201ENST00000473911 LINC00205P59089 165 aa12.11□□□□□ -0.47
CLIC3-201ENST00000473911 GNB1P62873 340 aa12.11□□□□□ -0.47
CLIC3-201ENST00000473911 RUNX1Q01196 453 aa12.11□□□□□ -0.47
CLIC3-201ENST00000473911 CD69Q07108 199 aa12.11□□□□□ -0.47
CLIC3-201ENST00000473911 KIAA0141Q14154 515 aaPredicted RBP12.11□□□□□ -0.47
CLIC3-201ENST00000473911 UNQ5815/PRO19632Q6UWF5 114 aa12.11□□□□□ -0.47
CLIC3-201ENST00000473911 SPARTQ8N0X7 666 aa12.11□□□□□ -0.47
CLIC3-201ENST00000473911 FCGR1BQ92637 280 aa12.11□□□□□ -0.47
CLIC3-201ENST00000473911 FLYWCH2Q96CP2 140 aaKnown RBP12.11□□□□□ -0.47
CLIC3-201ENST00000473911 FAM103A1Q9BTL3 118 aaKnown RBP12.11□□□□□ -0.47
CLIC3-201ENST00000473911 CABLES2Q9BTV7 478 aa12.11□□□□□ -0.47
CLIC3-201ENST00000473911 SLC35D1Q9NTN3 355 aa12.11□□□□□ -0.47
CLIC3-201ENST00000473911 GAB2Q9UQC2 676 aa12.11□□□□□ -0.47
CLIC3-201ENST00000473911 TRBV6-7A0A0A0MS04 114 aa12.1□□□□□ -0.47
CLIC3-201ENST00000473911 RAB27BO00194 218 aa12.1□□□□□ -0.47
CLIC3-201ENST00000473911 CA2P00918 260 aa12.1□□□□□ -0.47
CLIC3-201ENST00000473911 CD40LGP29965 261 aa12.1□□□□□ -0.47
CLIC3-201ENST00000473911 CBX3Q13185 183 aa12.1□□□□□ -0.47
CLIC3-201ENST00000473911 ZNF260Q3ZCT1 412 aa12.1□□□□□ -0.47
CLIC3-201ENST00000473911 ACTBL2Q562R1 376 aa12.1□□□□□ -0.47
CLIC3-201ENST00000473911 C19orf54Q5BKX5 351 aa12.1□□□□□ -0.47
CLIC3-201ENST00000473911 PYHIN1Q6K0P9 492 aa12.1□□□□□ -0.47
CLIC3-201ENST00000473911 ZNF562Q6V9R5 426 aa12.1□□□□□ -0.47
CLIC3-201ENST00000473911 CASTOR1Q8WTX7 329 aa12.1□□□□□ -0.47
CLIC3-201ENST00000473911 TXNL4BQ9NX01 149 aaKnown RBP12.1□□□□□ -0.47
CLIC3-201ENST00000473911 STUB1Q9UNE7 303 aa12.1□□□□□ -0.47
CLIC3-201ENST00000473911 SSR3Q9UNL2 185 aa12.1□□□□□ -0.47
CLIC3-201ENST00000473911 NUBP2Q9Y5Y2 271 aa12.1□□□□□ -0.47
CLIC3-201ENST00000473911 NOTOA8MTQ0 251 aa12.09□□□□□ -0.47
CLIC3-201ENST00000473911 SLC25A17O43808 307 aa12.09□□□□□ -0.47
CLIC3-201ENST00000473911 SOX15O60248 233 aa12.09□□□□□ -0.47
CLIC3-201ENST00000473911 DIRAS3O95661 229 aa12.09□□□□□ -0.47
CLIC3-201ENST00000473911 EGR2P11161 476 aaPredicted RBP12.09□□□□□ -0.47
CLIC3-201ENST00000473911 ECI1P42126 302 aa12.09□□□□□ -0.47
CLIC3-201ENST00000473911 ARL6IP1Q15041 203 aa12.09□□□□□ -0.47
CLIC3-201ENST00000473911 NR2C2APQ86WQ0 139 aa12.09□□□□□ -0.47
CLIC3-201ENST00000473911 LFNGQ8NES3 379 aa12.09□□□□□ -0.47
CLIC3-201ENST00000473911 GRPEL2Q8TAA5 225 aa12.09□□□□□ -0.47
CLIC3-201ENST00000473911 ARPC1AQ92747 370 aa12.09□□□□□ -0.47
CLIC3-201ENST00000473911 CENPOQ9BU64 300 aa12.09□□□□□ -0.47
CLIC3-201ENST00000473911 YTHDF1Q9BYJ9 559 aaKnown RBP12.09□□□□□ -0.47
CLIC3-201ENST00000473911 TOLLIPQ9H0E2 274 aa12.09□□□□□ -0.47
CLIC3-201ENST00000473911 ALX4Q9H161 411 aaPredicted RBP12.09□□□□□ -0.47
CLIC3-201ENST00000473911 SDHAF2Q9NX18 166 aa12.09□□□□□ -0.47
CLIC3-201ENST00000473911 CNIH1O95406 144 aa12.08□□□□□ -0.48
CLIC3-201ENST00000473911 SNRPBP14678 240 aaKnown RBP12.08□□□□□ -0.48
CLIC3-201ENST00000473911 FGF9P31371 208 aaPredicted RBP12.08□□□□□ -0.48
CLIC3-201ENST00000473911 FXYD3Q14802 87 aa12.08□□□□□ -0.48
CLIC3-201ENST00000473911 CDNFQ49AH0 187 aa12.08□□□□□ -0.48
CLIC3-201ENST00000473911 AKIRIN2Q53H80 203 aa12.08□□□□□ -0.48
CLIC3-201ENST00000473911 ASPHD1Q5U4P2 390 aa12.08□□□□□ -0.48
CLIC3-201ENST00000473911 HARBI1Q96MB7 349 aa12.08□□□□□ -0.48
CLIC3-201ENST00000473911 MS4A10Q96PG2 267 aa12.08□□□□□ -0.48
CLIC3-201ENST00000473911 PRR25Q96S07 402 aa12.08□□□□□ -0.48
CLIC3-201ENST00000473911 B9D2Q9BPU9 175 aa12.08□□□□□ -0.48
CLIC3-201ENST00000473911 TPSG1Q9NRR2 321 aa12.08□□□□□ -0.48
CLIC3-201ENST00000473911 DAPK2Q9UIK4 370 aa12.08□□□□□ -0.48
CLIC3-201ENST00000473911 SCOCQ9UIL1 159 aa12.08□□□□□ -0.48
CLIC3-201ENST00000473911 DNAH7Q8WXX0 4024 aa12.08□□□□□ -0.48
CLIC3-201ENST00000473911 DYNC2H1Q8NCM8 4307 aaKnown RBP12.08□□□□□ -0.48
CLIC3-201ENST00000473911 RYR2Q92736 4967 aa12.08□□□□□ -0.48
CLIC3-201ENST00000473911 LINC01619G3V211 115 aa12.07□□□□□ -0.48
CLIC3-201ENST00000473911 LGALS1P09382 135 aaKnown RBP12.07□□□□□ -0.48
CLIC3-201ENST00000473911 DTYMKP23919 212 aa12.07□□□□□ -0.48
CLIC3-201ENST00000473911 LGALS7P47929 136 aa12.07□□□□□ -0.48
CLIC3-201ENST00000473911 TPPP2P59282 170 aa12.07□□□□□ -0.48
CLIC3-201ENST00000473911 TAGLNQ01995 201 aaKnown RBP12.07□□□□□ -0.48
CLIC3-201ENST00000473911 SRSF7Q16629 238 aaKnown RBP eCLIP12.07□□□□□ -0.48
CLIC3-201ENST00000473911 RTL8BQ17RB0 113 aa12.07□□□□□ -0.48
CLIC3-201ENST00000473911 ZNF773Q6PK81 442 aa12.07□□□□□ -0.48
CLIC3-201ENST00000473911 TPRA1Q86W33 373 aa12.07□□□□□ -0.48
CLIC3-201ENST00000473911 BVESQ8NE79 360 aa12.07□□□□□ -0.48
CLIC3-201ENST00000473911 DCUN1D4Q92564 292 aa12.07□□□□□ -0.48
CLIC3-201ENST00000473911 ST6GALNAC5Q9BVH7 336 aa12.07□□□□□ -0.48
CLIC3-201ENST00000473911 ZNF355PQ9NSJ1 428 aa12.07□□□□□ -0.48
CLIC3-201ENST00000473911 ELF5Q9UKW6 265 aaPredicted RBP12.07□□□□□ -0.48
CLIC3-201ENST00000473911 RRP15Q9Y3B9 282 aaKnown RBP12.07□□□□□ -0.48
CLIC3-201ENST00000473911 OVOL1O14753 267 aa12.06□□□□□ -0.48
CLIC3-201ENST00000473911 SHOXO15266 292 aa12.06□□□□□ -0.48
CLIC3-201ENST00000473911 LY86O95711 162 aa12.06□□□□□ -0.48
CLIC3-201ENST00000473911 IGHV3-11P01762 117 aa12.06□□□□□ -0.48
CLIC3-201ENST00000473911 INSL3P51460 131 aa12.06□□□□□ -0.48
CLIC3-201ENST00000473911 Q6ZS49 121 aa12.06□□□□□ -0.48
CLIC3-201ENST00000473911 OR51E2Q9H255 320 aa12.06□□□□□ -0.48
CLIC3-201ENST00000473911 SLA2Q9H6Q3 261 aa12.06□□□□□ -0.48
CLIC3-201ENST00000473911 HUWE1Q7Z6Z7 4374 aaKnown RBP12.06□□□□□ -0.48
CLIC3-201ENST00000473911 STAB2Q8WWQ8 2551 aa12.05□□□□□ -0.48
CLIC3-201ENST00000473911 IGKV1D-8A0A087WSZ0 117 aa12.05□□□□□ -0.48
CLIC3-201ENST00000473911 J3QRK9 145 aa12.05□□□□□ -0.48
CLIC3-201ENST00000473911 ARPC1BO15143 372 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms