RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 C4orf17Q53FE4 359 aa9.18□□□□□ -0.94
C9orf3-214ENST00000473778 TMEM14EPQ6UXP3 125 aa9.18□□□□□ -0.94
C9orf3-214ENST00000473778 C11orf53Q8IXP5 236 aa9.18□□□□□ -0.94
C9orf3-214ENST00000473778 ZNF808Q8N4W9 903 aaPredicted RBP9.18□□□□□ -0.94
C9orf3-214ENST00000473778 OR52L2PQ8NGH6 319 aa9.18□□□□□ -0.94
C9orf3-214ENST00000473778 GATAD1Q8WUU5 269 aa9.18□□□□□ -0.94
C9orf3-214ENST00000473778 TAF15Q92804 592 aaKnown RBP eCLIP9.18□□□□□ -0.94
C9orf3-214ENST00000473778 PACRGQ96M98 296 aaPredicted RBP9.18□□□□□ -0.94
C9orf3-214ENST00000473778 MAP1LC3BQ9GZQ8 125 aa9.18□□□□□ -0.94
C9orf3-214ENST00000473778 OR2D2Q9H210 308 aa9.18□□□□□ -0.94
C9orf3-214ENST00000473778 CLN8Q9UBY8 286 aa9.18□□□□□ -0.94
C9orf3-214ENST00000473778 PCNX2A6NKB5 2137 aa9.18□□□□□ -0.94
C9orf3-214ENST00000473778 PMS2P5A8MQ11 134 aa9.17□□□□□ -0.94
C9orf3-214ENST00000473778 CEBPZOSA8MTT3 80 aa9.17□□□□□ -0.94
C9orf3-214ENST00000473778 C21orf140B9A014 251 aa9.17□□□□□ -0.94
C9orf3-214ENST00000473778 TRGC1P0CF51 173 aa9.17□□□□□ -0.94
C9orf3-214ENST00000473778 CD59P13987 128 aa9.17□□□□□ -0.94
C9orf3-214ENST00000473778 GNG10P50151 68 aa9.17□□□□□ -0.94
C9orf3-214ENST00000473778 RND2P52198 227 aa9.17□□□□□ -0.94
C9orf3-214ENST00000473778 AESQ08117 197 aa9.17□□□□□ -0.94
C9orf3-214ENST00000473778 SLC38A11Q08AI6 406 aa9.17□□□□□ -0.94
C9orf3-214ENST00000473778 TBC1D28Q2M2D7 210 aa9.17□□□□□ -0.94
C9orf3-214ENST00000473778 BTNL3Q6UXE8 466 aa9.17□□□□□ -0.94
C9orf3-214ENST00000473778 MOB1BQ7L9L4 216 aa9.17□□□□□ -0.94
C9orf3-214ENST00000473778 TPRX1Q8N7U7 411 aa9.17□□□□□ -0.94
C9orf3-214ENST00000473778 HCFC1P51610 2035 aa9.17□□□□□ -0.94
C9orf3-214ENST00000473778 ODAMA1E959 279 aa9.17□□□□□ -0.94
C9orf3-214ENST00000473778 C17orf98A8MV24 154 aa9.17□□□□□ -0.94
C9orf3-214ENST00000473778 S1PR2O95136 353 aa9.17□□□□□ -0.94
C9orf3-214ENST00000473778 CLDN1O95832 211 aa9.17□□□□□ -0.94
C9orf3-214ENST00000473778 HAND1O96004 215 aa9.17□□□□□ -0.94
C9orf3-214ENST00000473778 CRYABP02511 175 aaKnown RBP9.17□□□□□ -0.94
C9orf3-214ENST00000473778 SERF2P84101 59 aa9.17□□□□□ -0.94
C9orf3-214ENST00000473778 TMEM41BQ5BJD5 291 aa9.17□□□□□ -0.94
C9orf3-214ENST00000473778 SPINK9Q5DT21 86 aa9.17□□□□□ -0.94
C9orf3-214ENST00000473778 COQ2Q96H96 371 aa9.17□□□□□ -0.94
C9orf3-214ENST00000473778 FAM210BQ96KR6 192 aa9.17□□□□□ -0.94
C9orf3-214ENST00000473778 ABI3Q9P2A4 366 aa9.17□□□□□ -0.94
C9orf3-214ENST00000473778 KLF13Q9Y2Y9 288 aaPredicted RBP9.17□□□□□ -0.94
C9orf3-214ENST00000473778 CDX4O14627 284 aaPredicted RBP9.16□□□□□ -0.94
C9orf3-214ENST00000473778 SOX15O60248 233 aa9.16□□□□□ -0.94
C9orf3-214ENST00000473778 ZG16O60844 167 aa9.16□□□□□ -0.94
C9orf3-214ENST00000473778 CYB5R3P00387 301 aaPredicted RBP9.16□□□□□ -0.94
C9orf3-214ENST00000473778 HBG1P69891 147 aa9.16□□□□□ -0.94
C9orf3-214ENST00000473778 HBG2P69892 147 aa9.16□□□□□ -0.94
C9orf3-214ENST00000473778 RPP30P78346 268 aaKnown RBP9.16□□□□□ -0.94
C9orf3-214ENST00000473778 DHRS13Q6UX07 377 aa9.16□□□□□ -0.94
C9orf3-214ENST00000473778 ZNF664Q8N3J9 261 aa9.16□□□□□ -0.94
C9orf3-214ENST00000473778 SLC25A22Q9H936 323 aa9.16□□□□□ -0.94
C9orf3-214ENST00000473778 HES4Q9HCC6 221 aa9.16□□□□□ -0.94
C9orf3-214ENST00000473778 HSPB7Q9UBY9 170 aa9.16□□□□□ -0.94
C9orf3-214ENST00000473778 KLRC4-KLRK1H3BQV0 150 aa9.16□□□□□ -0.94
C9orf3-214ENST00000473778 SH2D1BO14796 132 aa9.16□□□□□ -0.94
C9orf3-214ENST00000473778 DLEU1O43261 78 aa9.16□□□□□ -0.94
C9orf3-214ENST00000473778 ZNF737O75373 536 aa9.16□□□□□ -0.94
C9orf3-214ENST00000473778 ZNF883P0CG24 379 aa9.16□□□□□ -0.94
C9orf3-214ENST00000473778 SSTR5P35346 364 aa9.16□□□□□ -0.94
C9orf3-214ENST00000473778 TFF3Q07654 80 aa9.16□□□□□ -0.94
C9orf3-214ENST00000473778 ZNF645Q8N7E2 425 aa9.16□□□□□ -0.94
C9orf3-214ENST00000473778 KLF14Q8TD94 323 aaPredicted RBP9.16□□□□□ -0.94
C9orf3-214ENST00000473778 COL25A1Q9BXS0 654 aaPredicted RBP9.16□□□□□ -0.94
C9orf3-214ENST00000473778 VAX2Q9UIW0 290 aa9.16□□□□□ -0.94
C9orf3-214ENST00000473778 POLDIP2Q9Y2S7 368 aa9.16□□□□□ -0.94
C9orf3-214ENST00000473778 INTS1Q8N201 2190 aaKnown RBP9.15□□□□□ -0.94
C9orf3-214ENST00000473778 TET2Q6N021 2002 aaPredicted RBP9.15□□□□□ -0.94
C9orf3-214ENST00000473778 TRGV5A0A0B4J1U4 118 aa9.15□□□□□ -0.94
C9orf3-214ENST00000473778 IGHV3-43A0A0B4J1X8 118 aa9.15□□□□□ -0.94
C9orf3-214ENST00000473778 LINC00473A8K010 186 aa9.15□□□□□ -0.94
C9orf3-214ENST00000473778 IQCF6A8MYZ5 107 aa9.15□□□□□ -0.94
C9orf3-214ENST00000473778 B4DEV8 164 aa9.15□□□□□ -0.94
C9orf3-214ENST00000473778 AGFG2O95081 481 aa9.15□□□□□ -0.94
C9orf3-214ENST00000473778 HBZP02008 142 aa9.15□□□□□ -0.94
C9orf3-214ENST00000473778 IGHV3-43DP0DP04 118 aa9.15□□□□□ -0.94
C9orf3-214ENST00000473778 MRGPRGQ86SM5 289 aa9.15□□□□□ -0.94
C9orf3-214ENST00000473778 Q8IYB0 196 aa9.15□□□□□ -0.94
C9orf3-214ENST00000473778 MRGPRDQ8TDS7 321 aa9.15□□□□□ -0.94
C9orf3-214ENST00000473778 NANOS1Q8WY41 292 aaKnown RBP9.15□□□□□ -0.94
C9orf3-214ENST00000473778 LHX4Q969G2 390 aa9.15□□□□□ -0.94
C9orf3-214ENST00000473778 DCTN5Q9BTE1 182 aa9.15□□□□□ -0.94
C9orf3-214ENST00000473778 SNHG12Q9BXW3 62 aa9.15□□□□□ -0.94
C9orf3-214ENST00000473778 TMEM242Q9NWH2 141 aa9.15□□□□□ -0.94
C9orf3-214ENST00000473778 FZR1Q9UM11 496 aa9.15□□□□□ -0.94
C9orf3-214ENST00000473778 SVILO95425 2214 aa9.15□□□□□ -0.94
C9orf3-214ENST00000473778 HEATR1Q9H583 2144 aaKnown RBP9.15□□□□□ -0.94
C9orf3-214ENST00000473778 LRRC30A6NM36 301 aa9.15□□□□□ -0.95
C9orf3-214ENST00000473778 CLDN34H7C241 214 aa9.15□□□□□ -0.95
C9orf3-214ENST00000473778 TNFSF15O95150 251 aa9.15□□□□□ -0.95
C9orf3-214ENST00000473778 PNRC1Q12796 327 aaPredicted RBP9.15□□□□□ -0.95
C9orf3-214ENST00000473778 RTP5Q14D33 572 aa9.15□□□□□ -0.95
C9orf3-214ENST00000473778 JOSD1Q15040 202 aaPredicted RBP9.15□□□□□ -0.95
C9orf3-214ENST00000473778 ACSF3Q4G176 576 aaPredicted RBP9.15□□□□□ -0.95
C9orf3-214ENST00000473778 PRAMEF6Q5VXH4 476 aa9.15□□□□□ -0.95
C9orf3-214ENST00000473778 TMEM208Q9BTX3 173 aa9.15□□□□□ -0.95
C9orf3-214ENST00000473778 PARD6GQ9BYG4 376 aaPredicted RBP9.15□□□□□ -0.95
C9orf3-214ENST00000473778 ZDHHC11Q9H8X9 412 aa9.15□□□□□ -0.95
C9orf3-214ENST00000473778 CADP27708 2225 aa9.14□□□□□ -0.95
C9orf3-214ENST00000473778 DEFB108AA8MXU0 73 aa9.14□□□□□ -0.95
C9orf3-214ENST00000473778 LINC00614P0C842 121 aa9.14□□□□□ -0.95
C9orf3-214ENST00000473778 COL8A2P25067 703 aa9.14□□□□□ -0.95
C9orf3-214ENST00000473778 MEF2BQ02080 365 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms