RNA–Protein interactions for RNA: ENST00000473258.1

COL6A3-210, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 5,433 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-210ENST00000473258 TMEM211Q6ICI0 200 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 ABCA7Q8IZY2 2146 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 LRTM2Q8N967 370 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 GPR146Q96CH1 333 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 MRPL20Q9BYC9 149 aaKnown RBP7.78□□□□□ -1.16
COL6A3-210ENST00000473258 TMEM222Q9H0R3 208 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 CD163L1Q9NR16 1453 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 LRRIQ1Q96JM4 1722 aa7.78□□□□□ -1.16
COL6A3-210ENST00000473258 A0A1W2PP55 124 aa7.77□□□□□ -1.16
COL6A3-210ENST00000473258 C9JAW5 83 aa7.77□□□□□ -1.16
COL6A3-210ENST00000473258 CD160O95971 181 aa7.77□□□□□ -1.16
COL6A3-210ENST00000473258 HOXB2P14652 356 aa7.77□□□□□ -1.16
COL6A3-210ENST00000473258 SSPNQ14714 243 aa7.77□□□□□ -1.16
COL6A3-210ENST00000473258 RBPMS2Q6ZRY4 209 aaKnown RBP7.77□□□□□ -1.16
COL6A3-210ENST00000473258 TMEFF1Q8IYR6 380 aa7.77□□□□□ -1.16
COL6A3-210ENST00000473258 RP1P56715 2156 aa7.77□□□□□ -1.17
COL6A3-210ENST00000473258 A0A1W2PRE2 83 aa7.77□□□□□ -1.17
COL6A3-210ENST00000473258 PSG2P11465 335 aa7.77□□□□□ -1.17
COL6A3-210ENST00000473258 SCGB3A1Q96QR1 104 aa7.77□□□□□ -1.17
COL6A3-210ENST00000473258 hDV102S1A0JD36 115 aa7.77□□□□□ -1.17
COL6A3-210ENST00000473258 HBDP02042 147 aa7.77□□□□□ -1.17
COL6A3-210ENST00000473258 IGLC2P0DOY2 106 aa7.77□□□□□ -1.17
COL6A3-210ENST00000473258 IGLC3P0DOY3 106 aa7.77□□□□□ -1.17
COL6A3-210ENST00000473258 GFRA1P56159 465 aa7.77□□□□□ -1.17
COL6A3-210ENST00000473258 MRPL23Q16540 153 aaKnown RBP7.77□□□□□ -1.17
COL6A3-210ENST00000473258 LCN12Q6JVE5 192 aa7.77□□□□□ -1.17
COL6A3-210ENST00000473258 TSACCQ96A04 125 aaPredicted RBP7.77□□□□□ -1.17
COL6A3-210ENST00000473258 SLC25A38Q96DW6 304 aa7.77□□□□□ -1.17
COL6A3-210ENST00000473258 MRGPRX3Q96LB0 322 aa7.77□□□□□ -1.17
COL6A3-210ENST00000473258 KIR2DL4Q99706 377 aa7.77□□□□□ -1.17
COL6A3-210ENST00000473258 DEPDC5O75140 1603 aa7.77□□□□□ -1.17
COL6A3-210ENST00000473258 CHD1O14646 1710 aa7.77□□□□□ -1.17
COL6A3-210ENST00000473258 DSPPQ9NZW4 1301 aa7.77□□□□□ -1.17
COL6A3-210ENST00000473258 TRAV14DV4A0A0A6YYC5 116 aa7.77□□□□□ -1.17
COL6A3-210ENST00000473258 IGHV2-70DA0A0C4DH43 119 aa7.77□□□□□ -1.17
COL6A3-210ENST00000473258 A0A1B0GUT8 65 aa7.77□□□□□ -1.17
COL6A3-210ENST00000473258 C17orf51A8MQB3 221 aa7.77□□□□□ -1.17
COL6A3-210ENST00000473258 F8VVB4 439 aa7.77□□□□□ -1.17
COL6A3-210ENST00000473258 F8VWA3 439 aa7.77□□□□□ -1.17
COL6A3-210ENST00000473258 FAM53AQ6NSI3 398 aaPredicted RBP7.77□□□□□ -1.17
COL6A3-210ENST00000473258 WDR82Q6UXN9 313 aa7.77□□□□□ -1.17
COL6A3-210ENST00000473258 CRIM1Q9NZV1 1036 aa7.77□□□□□ -1.17
COL6A3-210ENST00000473258 A0A0U1RQF3 1178 aa7.77□□□□□ -1.17
COL6A3-210ENST00000473258 ZNF815PA8K554 130 aa7.77□□□□□ -1.17
COL6A3-210ENST00000473258 MGST3O14880 152 aa7.77□□□□□ -1.17
COL6A3-210ENST00000473258 PLNP26678 52 aa7.77□□□□□ -1.17
COL6A3-210ENST00000473258 CNEP1R1Q8N9A8 125 aa7.77□□□□□ -1.17
COL6A3-210ENST00000473258 CPEB1Q9BZB8 566 aaKnown RBP7.77□□□□□ -1.17
COL6A3-210ENST00000473258 GLI2P10070 1586 aa7.76□□□□□ -1.17
COL6A3-210ENST00000473258 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.76□□□□□ -1.17
COL6A3-210ENST00000473258 PPBPP02775 128 aa7.76□□□□□ -1.17
COL6A3-210ENST00000473258 MIC13Q5XKP0 118 aa7.76□□□□□ -1.17
COL6A3-210ENST00000473258 STPG4Q8N801 248 aa7.76□□□□□ -1.17
COL6A3-210ENST00000473258 A0A0B4J2E0 115 aa7.76□□□□□ -1.17
COL6A3-210ENST00000473258 A0A1B0GX12 115 aa7.76□□□□□ -1.17
COL6A3-210ENST00000473258 TCRBV5S1A1TA0A578 114 aa7.76□□□□□ -1.17
COL6A3-210ENST00000473258 C8orf88P0DMB2 117 aa7.76□□□□□ -1.17
COL6A3-210ENST00000473258 LYG1Q8N1E2 194 aa7.76□□□□□ -1.17
COL6A3-210ENST00000473258 FAM222BQ8WU58 562 aa7.76□□□□□ -1.17
COL6A3-210ENST00000473258 PLPPR2Q96GM1 343 aa7.76□□□□□ -1.17
COL6A3-210ENST00000473258 FBXL15Q9H469 300 aa7.76□□□□□ -1.17
COL6A3-210ENST00000473258 GPR35Q9HC97 309 aa7.76□□□□□ -1.17
COL6A3-210ENST00000473258 PRNDQ9UKY0 176 aa7.76□□□□□ -1.17
COL6A3-210ENST00000473258 TECPR2O15040 1411 aa7.76□□□□□ -1.17
COL6A3-210ENST00000473258 SPATA31D1Q6ZQQ2 1576 aa7.76□□□□□ -1.17
COL6A3-210ENST00000473258 IGHV3-64DA0A0J9YX35 117 aa7.76□□□□□ -1.17
COL6A3-210ENST00000473258 IGHV2-5P01817 119 aa7.76□□□□□ -1.17
COL6A3-210ENST00000473258 IGKCP01834 107 aa7.76□□□□□ -1.17
COL6A3-210ENST00000473258 ZNF688P0C7X2 276 aa7.76□□□□□ -1.17
COL6A3-210ENST00000473258 SELPP16109 830 aa7.76□□□□□ -1.17
COL6A3-210ENST00000473258 CX3CL1P78423 397 aa7.76□□□□□ -1.17
COL6A3-210ENST00000473258 ORMDL3Q8N138 153 aa7.76□□□□□ -1.17
COL6A3-210ENST00000473258 C12orf76Q8N812 135 aaPredicted RBP7.76□□□□□ -1.17
COL6A3-210ENST00000473258 RFESDQ8TAC1 157 aa7.76□□□□□ -1.17
COL6A3-210ENST00000473258 ST6GALNAC2Q9UJ37 374 aa7.76□□□□□ -1.17
COL6A3-210ENST00000473258 PKIGQ9Y2B9 76 aa7.76□□□□□ -1.17
COL6A3-210ENST00000473258 TULP4Q9NRJ4 1543 aa7.76□□□□□ -1.17
COL6A3-210ENST00000473258 WTIPA6NIX2 430 aaPredicted RBP7.76□□□□□ -1.17
COL6A3-210ENST00000473258 CD33P20138 364 aa7.76□□□□□ -1.17
COL6A3-210ENST00000473258 GCHFRP30047 84 aa7.76□□□□□ -1.17
COL6A3-210ENST00000473258 CD70P32970 193 aa7.76□□□□□ -1.17
COL6A3-210ENST00000473258 WFDC3Q8IUB2 231 aa7.76□□□□□ -1.17
COL6A3-210ENST00000473258 BRK1Q8WUW1 75 aa7.76□□□□□ -1.17
COL6A3-210ENST00000473258 PLA2G3Q9NZ20 509 aa7.76□□□□□ -1.17
COL6A3-210ENST00000473258 SMPXQ9UHP9 88 aa7.76□□□□□ -1.17
COL6A3-210ENST00000473258 FAM90A26D6RGX4 464 aa7.75□□□□□ -1.17
COL6A3-210ENST00000473258 HAX1O00165 279 aa7.75□□□□□ -1.17
COL6A3-210ENST00000473258 NCR2O95944 276 aa7.75□□□□□ -1.17
COL6A3-210ENST00000473258 PTGDSP41222 190 aa7.75□□□□□ -1.17
COL6A3-210ENST00000473258 INO80CQ6PI98 192 aaPredicted RBP7.75□□□□□ -1.17
COL6A3-210ENST00000473258 ST8SIA1Q92185 356 aa7.75□□□□□ -1.17
COL6A3-210ENST00000473258 SIRT4Q9Y6E7 314 aaPredicted RBP7.75□□□□□ -1.17
COL6A3-210ENST00000473258 SERTM1A2A2V5 107 aa7.75□□□□□ -1.17
COL6A3-210ENST00000473258 RBMY1BA6NDE4 496 aaKnown RBP7.75□□□□□ -1.17
COL6A3-210ENST00000473258 RBMY1EA6NEQ0 496 aaKnown RBP7.75□□□□□ -1.17
COL6A3-210ENST00000473258 RBMY1DP0C7P1 496 aaKnown RBP7.75□□□□□ -1.17
COL6A3-210ENST00000473258 RBMY1A1P0DJD3 496 aaKnown RBP7.75□□□□□ -1.17
COL6A3-210ENST00000473258 RBMY1CP0DJD4 496 aa7.75□□□□□ -1.17
COL6A3-210ENST00000473258 ZNF83P51522 516 aa7.75□□□□□ -1.17
COL6A3-210ENST00000473258 ASPHD2Q6ICH7 369 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms