RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 A0A1B0GV90 55 aa17.71■□□□□ 0.43
COL18A1-207ENST00000473212 A0A1W2PPQ1 181 aa17.71■□□□□ 0.43
COL18A1-207ENST00000473212 SH2D1BO14796 132 aa17.71■□□□□ 0.43
COL18A1-207ENST00000473212 JOSD1Q15040 202 aaPredicted RBP17.71■□□□□ 0.43
COL18A1-207ENST00000473212 BTNL3Q6UXE8 466 aa17.71■□□□□ 0.43
COL18A1-207ENST00000473212 SSX9Q7RTT3 188 aa17.71■□□□□ 0.43
COL18A1-207ENST00000473212 Q8IYB0 196 aa17.71■□□□□ 0.43
COL18A1-207ENST00000473212 DEFB123Q8N688 67 aa17.71■□□□□ 0.43
COL18A1-207ENST00000473212 ZNF645Q8N7E2 425 aa17.71■□□□□ 0.43
COL18A1-207ENST00000473212 OR52L2PQ8NGH6 319 aa17.71■□□□□ 0.43
COL18A1-207ENST00000473212 POLDIP2Q9Y2S7 368 aa17.71■□□□□ 0.43
COL18A1-207ENST00000473212 ODAMA1E959 279 aa17.7■□□□□ 0.42
COL18A1-207ENST00000473212 C19orf67A6NJJ6 358 aa17.7■□□□□ 0.42
COL18A1-207ENST00000473212 LRRC30A6NM36 301 aa17.7■□□□□ 0.42
COL18A1-207ENST00000473212 SMPD2O60906 423 aa17.7■□□□□ 0.42
COL18A1-207ENST00000473212 GZMBP10144 247 aa17.7■□□□□ 0.42
COL18A1-207ENST00000473212 MPLP40238 635 aa17.7■□□□□ 0.42
COL18A1-207ENST00000473212 OR3A1P47881 315 aa17.7■□□□□ 0.42
COL18A1-207ENST00000473212 ZDHHC16Q969W1 377 aa17.7■□□□□ 0.42
COL18A1-207ENST00000473212 ZG16O60844 167 aa17.7■□□□□ 0.42
COL18A1-207ENST00000473212 S1PR2O95136 353 aa17.7■□□□□ 0.42
COL18A1-207ENST00000473212 ZNF146Q15072 292 aa17.7■□□□□ 0.42
COL18A1-207ENST00000473212 MSMO1Q15800 293 aa17.7■□□□□ 0.42
COL18A1-207ENST00000473212 Q6ZR03 302 aa17.7■□□□□ 0.42
COL18A1-207ENST00000473212 SLC25A40Q8TBP6 338 aa17.7■□□□□ 0.42
COL18A1-207ENST00000473212 DDA1Q9BW61 102 aa17.7■□□□□ 0.42
COL18A1-207ENST00000473212 PMS2P5A8MQ11 134 aa17.69■□□□□ 0.42
COL18A1-207ENST00000473212 DVL1O14640 695 aa17.69■□□□□ 0.42
COL18A1-207ENST00000473212 PPP1CBP62140 327 aa17.69■□□□□ 0.42
COL18A1-207ENST00000473212 SLC10A1Q14973 349 aa17.69■□□□□ 0.42
COL18A1-207ENST00000473212 TGIF2LYQ8IUE0 185 aa17.69■□□□□ 0.42
COL18A1-207ENST00000473212 PAGE4O60829 102 aa17.69■□□□□ 0.42
COL18A1-207ENST00000473212 HRASP01112 189 aa17.69■□□□□ 0.42
COL18A1-207ENST00000473212 P0C879 139 aa17.69■□□□□ 0.42
COL18A1-207ENST00000473212 MPV17P39210 176 aa17.69■□□□□ 0.42
COL18A1-207ENST00000473212 BRWD1-AS2P59051 145 aa17.69■□□□□ 0.42
COL18A1-207ENST00000473212 AESQ08117 197 aa17.69■□□□□ 0.42
COL18A1-207ENST00000473212 ATP6V1FQ16864 119 aa17.69■□□□□ 0.42
COL18A1-207ENST00000473212 OR5T1Q8NG75 326 aa17.69■□□□□ 0.42
COL18A1-207ENST00000473212 OR10P1Q8NGE3 313 aa17.69■□□□□ 0.42
COL18A1-207ENST00000473212 RAB24Q969Q5 203 aa17.69■□□□□ 0.42
COL18A1-207ENST00000473212 ACTR3CQ9C0K3 210 aaPredicted RBP17.69■□□□□ 0.42
COL18A1-207ENST00000473212 KCNIP1Q9NZI2 227 aa17.69■□□□□ 0.42
COL18A1-207ENST00000473212 ABI3Q9P2A4 366 aa17.69■□□□□ 0.42
COL18A1-207ENST00000473212 FZR1Q9UM11 496 aa17.69■□□□□ 0.42
COL18A1-207ENST00000473212 GYPAP02724 150 aa17.68■□□□□ 0.42
COL18A1-207ENST00000473212 PSG7Q13046 419 aa17.68■□□□□ 0.42
COL18A1-207ENST00000473212 MDS2Q8NDY4 140 aa17.68■□□□□ 0.42
COL18A1-207ENST00000473212 DTD1Q8TEA8 209 aa17.68■□□□□ 0.42
COL18A1-207ENST00000473212 ZPBPQ9BS86 351 aa17.68■□□□□ 0.42
COL18A1-207ENST00000473212 MANBALQ9NQG1 85 aa17.68■□□□□ 0.42
COL18A1-207ENST00000473212 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.68■□□□□ 0.42
COL18A1-207ENST00000473212 C17orf98A8MV24 154 aa17.68■□□□□ 0.42
COL18A1-207ENST00000473212 IFNA10P01566 189 aa17.68■□□□□ 0.42
COL18A1-207ENST00000473212 MBP02144 154 aa17.68■□□□□ 0.42
COL18A1-207ENST00000473212 RNF224P0DH78 156 aa17.68■□□□□ 0.42
COL18A1-207ENST00000473212 TBC1D28Q2M2D7 210 aa17.68■□□□□ 0.42
COL18A1-207ENST00000473212 RNASEH2CQ8TDP1 164 aaKnown RBP17.68■□□□□ 0.42
COL18A1-207ENST00000473212 TMEM37Q8WXS4 190 aa17.68■□□□□ 0.42
COL18A1-207ENST00000473212 GALMQ96C23 342 aa17.68■□□□□ 0.42
COL18A1-207ENST00000473212 NPCDR1Q9BY65 106 aa17.68■□□□□ 0.42
COL18A1-207ENST00000473212 IGHV3-43A0A0B4J1X8 118 aa17.67■□□□□ 0.42
COL18A1-207ENST00000473212 C12orf77C9JDV5 145 aa17.67■□□□□ 0.42
COL18A1-207ENST00000473212 HAND1O96004 215 aa17.67■□□□□ 0.42
COL18A1-207ENST00000473212 IGHV3-43DP0DP04 118 aa17.67■□□□□ 0.42
COL18A1-207ENST00000473212 RAC2P15153 192 aa17.67■□□□□ 0.42
COL18A1-207ENST00000473212 COX5AP20674 150 aa17.67■□□□□ 0.42
COL18A1-207ENST00000473212 DHRS13Q6UX07 377 aa17.67■□□□□ 0.42
COL18A1-207ENST00000473212 DBX2Q6ZNG2 339 aa17.67■□□□□ 0.42
COL18A1-207ENST00000473212 NANOS1Q8WY41 292 aaKnown RBP17.67■□□□□ 0.42
COL18A1-207ENST00000473212 PLPPR2Q96GM1 343 aa17.67■□□□□ 0.42
COL18A1-207ENST00000473212 METRNQ9UJH8 293 aa17.67■□□□□ 0.42
COL18A1-207ENST00000473212 FUT9Q9Y231 359 aa17.67■□□□□ 0.42
COL18A1-207ENST00000473212 CADP27708 2225 aa17.67■□□□□ 0.42
COL18A1-207ENST00000473212 RBMXL2O75526 392 aaKnown RBP17.66■□□□□ 0.42
COL18A1-207ENST00000473212 AGFG2O95081 481 aa17.66■□□□□ 0.42
COL18A1-207ENST00000473212 FAM3BP58499 235 aaPredicted RBP17.66■□□□□ 0.42
COL18A1-207ENST00000473212 DEFB108AA8MXU0 73 aa17.66■□□□□ 0.42
COL18A1-207ENST00000473212 IGHV1-2P23083 117 aa17.66■□□□□ 0.42
COL18A1-207ENST00000473212 NUBP1P53384 320 aa17.66■□□□□ 0.42
COL18A1-207ENST00000473212 EIF4EBP1Q13541 118 aaPredicted RBP17.66■□□□□ 0.42
COL18A1-207ENST00000473212 PRSS8Q16651 343 aa17.66■□□□□ 0.42
COL18A1-207ENST00000473212 COA6Q5JTJ3 125 aaKnown RBP17.66■□□□□ 0.42
COL18A1-207ENST00000473212 ZNF709Q8N972 641 aa17.66■□□□□ 0.42
COL18A1-207ENST00000473212 TMEM170AQ8WVE7 144 aa17.66■□□□□ 0.42
COL18A1-207ENST00000473212 ANAPC16Q96DE5 110 aa17.66■□□□□ 0.42
COL18A1-207ENST00000473212 PCNX2A6NKB5 2137 aa17.66■□□□□ 0.42
COL18A1-207ENST00000473212 ICE1Q9Y2F5 2266 aa17.65■□□□□ 0.42
COL18A1-207ENST00000473212 TMEM30CPA0ZSE6 113 aa17.65■□□□□ 0.42
COL18A1-207ENST00000473212 C1QTNF9BB2RNN3 333 aa17.65■□□□□ 0.42
COL18A1-207ENST00000473212 ZBTB34Q8NCN2 500 aa17.65■□□□□ 0.42
COL18A1-207ENST00000473212 OR2T10Q8NGZ9 312 aa17.65■□□□□ 0.42
COL18A1-207ENST00000473212 RFESDQ8TAC1 157 aa17.65■□□□□ 0.42
COL18A1-207ENST00000473212 NEIL1Q96FI4 390 aaPredicted RBP17.65■□□□□ 0.42
COL18A1-207ENST00000473212 DCTN5Q9BTE1 182 aa17.65■□□□□ 0.42
COL18A1-207ENST00000473212 ZNF705GA8MUZ8 300 aaPredicted RBP17.65■□□□□ 0.42
COL18A1-207ENST00000473212 MLNRO43193 412 aa17.65■□□□□ 0.42
COL18A1-207ENST00000473212 GALR2O43603 387 aaPredicted RBP17.65■□□□□ 0.42
COL18A1-207ENST00000473212 HBZP02008 142 aa17.65■□□□□ 0.42
COL18A1-207ENST00000473212 BMP5P22003 454 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms