RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 SETD6Q8TBK2 473 aa10.4□□□□□ -0.74
SMURF1-203ENST00000472627 C2CD4CQ8TF44 421 aa10.4□□□□□ -0.74
SMURF1-203ENST00000472627 Q96M66 194 aa10.4□□□□□ -0.74
SMURF1-203ENST00000472627 Q96MT0 163 aa10.4□□□□□ -0.74
SMURF1-203ENST00000472627 AKIP1Q9NQ31 210 aa10.4□□□□□ -0.74
SMURF1-203ENST00000472627 SLC35D1Q9NTN3 355 aa10.4□□□□□ -0.74
SMURF1-203ENST00000472627 KIR2DL5BA0A0G2JN68 375 aa10.39□□□□□ -0.75
SMURF1-203ENST00000472627 KIR2DL5BA0A0G2JPC4 375 aa10.39□□□□□ -0.75
SMURF1-203ENST00000472627 CREBL2O60519 120 aaPredicted RBP10.39□□□□□ -0.75
SMURF1-203ENST00000472627 SCAF4O95104 1147 aaKnown RBP10.39□□□□□ -0.75
SMURF1-203ENST00000472627 APELAP0DMC3 54 aa10.39□□□□□ -0.75
SMURF1-203ENST00000472627 ZNF45Q02386 682 aa10.39□□□□□ -0.75
SMURF1-203ENST00000472627 RBMS2Q15434 407 aaKnown RBP10.39□□□□□ -0.75
SMURF1-203ENST00000472627 FAM106AQ4KMX7 169 aa10.39□□□□□ -0.75
SMURF1-203ENST00000472627 KIR2DL5AQ8N109 375 aa10.39□□□□□ -0.75
SMURF1-203ENST00000472627 KIR2DL5BQ8NHK3 375 aa10.39□□□□□ -0.75
SMURF1-203ENST00000472627 FBLIM1Q8WUP2 373 aa10.39□□□□□ -0.75
SMURF1-203ENST00000472627 FAM46BQ96A09 425 aa10.39□□□□□ -0.75
SMURF1-203ENST00000472627 RNF183Q96D59 192 aa10.39□□□□□ -0.75
SMURF1-203ENST00000472627 HARBI1Q96MB7 349 aa10.39□□□□□ -0.75
SMURF1-203ENST00000472627 ZNF446Q9NWS9 450 aa10.39□□□□□ -0.75
SMURF1-203ENST00000472627 GHRLQ9UBU3 117 aa10.39□□□□□ -0.75
SMURF1-203ENST00000472627 MGAT4AQ9UM21 535 aa10.39□□□□□ -0.75
SMURF1-203ENST00000472627 TRAV25A0A0B4J276 109 aa10.38□□□□□ -0.75
SMURF1-203ENST00000472627 ZNF320A2RRD8 509 aa10.38□□□□□ -0.75
SMURF1-203ENST00000472627 SHOXO15266 292 aa10.38□□□□□ -0.75
SMURF1-203ENST00000472627 ACTL6BO94805 426 aa10.38□□□□□ -0.75
SMURF1-203ENST00000472627 GSTT2P0CG29 244 aa10.38□□□□□ -0.75
SMURF1-203ENST00000472627 GSTT2BP0CG30 244 aa10.38□□□□□ -0.75
SMURF1-203ENST00000472627 CEACAM6P40199 344 aa10.38□□□□□ -0.75
SMURF1-203ENST00000472627 GTF2A1P52655 376 aaPredicted RBP10.38□□□□□ -0.75
SMURF1-203ENST00000472627 GYS2P54840 703 aa10.38□□□□□ -0.75
SMURF1-203ENST00000472627 GNGT1P63211 74 aa10.38□□□□□ -0.75
SMURF1-203ENST00000472627 SSBP2P81877 361 aaPredicted RBP10.38□□□□□ -0.75
SMURF1-203ENST00000472627 TAGLNQ01995 201 aaKnown RBP10.38□□□□□ -0.75
SMURF1-203ENST00000472627 PJVKQ0ZLH3 352 aa10.38□□□□□ -0.75
SMURF1-203ENST00000472627 RTL8BQ17RB0 113 aa10.38□□□□□ -0.75
SMURF1-203ENST00000472627 C5orf24Q7Z6I8 188 aa10.38□□□□□ -0.75
SMURF1-203ENST00000472627 SLC25A42Q86VD7 318 aa10.38□□□□□ -0.75
SMURF1-203ENST00000472627 SVOPQ8N4V2 548 aa10.38□□□□□ -0.75
SMURF1-203ENST00000472627 ZNF383Q8NA42 475 aa10.38□□□□□ -0.75
SMURF1-203ENST00000472627 KCNG3Q8TAE7 436 aa10.38□□□□□ -0.75
SMURF1-203ENST00000472627 AGMATQ9BSE5 352 aa10.38□□□□□ -0.75
SMURF1-203ENST00000472627 C11orf54Q9H0W9 315 aaPredicted RBP10.38□□□□□ -0.75
SMURF1-203ENST00000472627 RIMS4Q9H426 269 aaPredicted RBP10.38□□□□□ -0.75
SMURF1-203ENST00000472627 FBXL17Q9UF56 701 aa10.38□□□□□ -0.75
SMURF1-203ENST00000472627 M0R1X1 148 aa10.37□□□□□ -0.75
SMURF1-203ENST00000472627 IGFBP3P17936 291 aaPredicted RBP10.37□□□□□ -0.75
SMURF1-203ENST00000472627 TNXAQ16473 311 aa10.37□□□□□ -0.75
SMURF1-203ENST00000472627 C15orf32Q32M92 178 aa10.37□□□□□ -0.75
SMURF1-203ENST00000472627 VMA21Q3ZAQ7 101 aa10.37□□□□□ -0.75
SMURF1-203ENST00000472627 Q499Y3 187 aa10.37□□□□□ -0.75
SMURF1-203ENST00000472627 SIGIRRQ6IA17 410 aa10.37□□□□□ -0.75
SMURF1-203ENST00000472627 TMPRSS11AQ6ZMR5 421 aa10.37□□□□□ -0.75
SMURF1-203ENST00000472627 GPHB5Q86YW7 130 aa10.37□□□□□ -0.75
SMURF1-203ENST00000472627 OR2C3Q8N628 320 aa10.37□□□□□ -0.75
SMURF1-203ENST00000472627 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.37□□□□□ -0.75
SMURF1-203ENST00000472627 C11orf45Q8TAV5 145 aa10.37□□□□□ -0.75
SMURF1-203ENST00000472627 MARC2Q969Z3 335 aa10.37□□□□□ -0.75
SMURF1-203ENST00000472627 SPIN2AQ99865 258 aa10.37□□□□□ -0.75
SMURF1-203ENST00000472627 SPIN2BQ9BPZ2 258 aa10.37□□□□□ -0.75
SMURF1-203ENST00000472627 C6orf62Q9GZU0 229 aaPredicted RBP10.37□□□□□ -0.75
SMURF1-203ENST00000472627 FBXL7Q9UJT9 491 aa10.37□□□□□ -0.75
SMURF1-203ENST00000472627 AP4S1Q9Y587 144 aa10.37□□□□□ -0.75
SMURF1-203ENST00000472627 PPP5D1E7EU14 171 aa10.36□□□□□ -0.75
SMURF1-203ENST00000472627 OR2C1O95371 312 aa10.36□□□□□ -0.75
SMURF1-203ENST00000472627 CRYGBP07316 175 aa10.36□□□□□ -0.75
SMURF1-203ENST00000472627 PRR20EP86478 221 aa10.36□□□□□ -0.75
SMURF1-203ENST00000472627 PRR20CP86479 221 aa10.36□□□□□ -0.75
SMURF1-203ENST00000472627 PRR20DP86480 221 aa10.36□□□□□ -0.75
SMURF1-203ENST00000472627 PRR20BP86481 221 aa10.36□□□□□ -0.75
SMURF1-203ENST00000472627 PRR20AP86496 221 aa10.36□□□□□ -0.75
SMURF1-203ENST00000472627 YIF1BQ5BJH7 314 aa10.36□□□□□ -0.75
SMURF1-203ENST00000472627 AMIGO2Q86SJ2 522 aa10.36□□□□□ -0.75
SMURF1-203ENST00000472627 NKAIN3Q8N8D7 197 aa10.36□□□□□ -0.75
SMURF1-203ENST00000472627 UXS1Q8NBZ7 420 aa10.36□□□□□ -0.75
SMURF1-203ENST00000472627 SRSF12Q8WXF0 261 aaKnown RBP10.36□□□□□ -0.75
SMURF1-203ENST00000472627 CACNG8Q8WXS5 425 aa10.36□□□□□ -0.75
SMURF1-203ENST00000472627 ACOT12Q8WYK0 555 aa10.36□□□□□ -0.75
SMURF1-203ENST00000472627 PTX4Q96A99 478 aa10.36□□□□□ -0.75
SMURF1-203ENST00000472627 SMIM19Q96E16 107 aa10.36□□□□□ -0.75
SMURF1-203ENST00000472627 OAZ3Q9UMX2 235 aa10.36□□□□□ -0.75
SMURF1-203ENST00000472627 RPL36Q9Y3U8 105 aaKnown RBP10.36□□□□□ -0.75
SMURF1-203ENST00000472627 ABCA13Q86UQ4 5058 aa10.36□□□□□ -0.75
SMURF1-203ENST00000472627 TRBV9A0A0B4J1U6 114 aa10.35□□□□□ -0.75
SMURF1-203ENST00000472627 A8MWP6 167 aa10.35□□□□□ -0.75
SMURF1-203ENST00000472627 DYNC1I1O14576 645 aa10.35□□□□□ -0.75
SMURF1-203ENST00000472627 XRCC3O43542 346 aa10.35□□□□□ -0.75
SMURF1-203ENST00000472627 RBMXL2O75526 392 aaKnown RBP10.35□□□□□ -0.75
SMURF1-203ENST00000472627 IGLV2-23P01705 113 aa10.35□□□□□ -0.75
SMURF1-203ENST00000472627 UBBP0CG47 229 aa10.35□□□□□ -0.75
SMURF1-203ENST00000472627 RRASP10301 218 aa10.35□□□□□ -0.75
SMURF1-203ENST00000472627 ARL3P36405 182 aa10.35□□□□□ -0.75
SMURF1-203ENST00000472627 TPBGQ13641 420 aa10.35□□□□□ -0.75
SMURF1-203ENST00000472627 BTNL8Q6UX41 500 aa10.35□□□□□ -0.75
SMURF1-203ENST00000472627 ORAI1Q96D31 301 aa10.35□□□□□ -0.75
SMURF1-203ENST00000472627 CENPNQ96H22 339 aaPredicted RBP10.35□□□□□ -0.75
SMURF1-203ENST00000472627 SPAG8Q99932 426 aaPredicted RBP10.35□□□□□ -0.75
SMURF1-203ENST00000472627 UQCC2Q9BRT2 126 aa10.35□□□□□ -0.75
SMURF1-203ENST00000472627 FAAP24Q9BTP7 215 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms