RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 GLRXP35754 106 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 GALR1P47211 349 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 UBE2E1P51965 193 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 NCS1P62166 190 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 TNFAIP6P98066 277 aaPredicted RBP2.25□□□□□ -2.05
CD46-213ENST00000471987 SMAGPQ0VAQ4 97 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 HTR4Q13639 388 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 CLINT1Q14677 625 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 EBPQ15125 230 aaKnown RBP2.25□□□□□ -2.05
CD46-213ENST00000471987 RGNQ15493 299 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 SSX1Q16384 188 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 TIGITQ495A1 244 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 CLLU1Q5K131 121 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 VAX1Q5SQQ9 334 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 COL5A1-AS1Q5SY13 56 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 AVPI1Q5T686 147 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 TPTE2P1Q5T6R2 138 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 FBXW12Q6X9E4 464 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 TMEM150AQ86TG1 271 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 OOSP2Q86WS3 158 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 PACRGLQ8N7B6 248 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 ZNF709Q8N972 641 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 OR5A2Q8NGI9 324 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 OR5K1Q8NHB7 308 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 MFSD8Q8NHS3 518 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 ZFAND1Q8TCF1 268 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 THEM6Q8WUY1 208 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 LCN9Q8WX39 176 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 HIST1H2BAQ96A08 127 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 PTX4Q96A99 478 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 EEF1AKMT3Q96AZ1 226 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 DYNLL2Q96FJ2 89 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 PGLYRP3Q96LB9 341 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 UBE2E2Q96LR5 201 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 MS4A4EQ96PG1 132 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 OR4K3Q96R72 315 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 SORT1Q99523 831 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 PSMG3Q9BT73 122 aaPredicted RBP2.25□□□□□ -2.05
CD46-213ENST00000471987 SNHG12Q9BXW3 62 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 COA1Q9GZY4 146 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 RBKSQ9H477 322 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 METTL17Q9H7H0 456 aaPredicted RBP2.25□□□□□ -2.05
CD46-213ENST00000471987 RNF122Q9H9V4 155 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 TAF9BQ9HBM6 251 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 ACER3Q9NUN7 267 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 RBM22Q9NW64 420 aaKnown RBP eCLIP2.25□□□□□ -2.051e-13■■■■■ 30.7
CD46-213ENST00000471987 RBFOX1Q9NWB1 397 aaKnown RBP2.25□□□□□ -2.05
CD46-213ENST00000471987 TAS2R5Q9NYW4 299 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 WRAP73Q9P2S5 460 aaPredicted RBP2.25□□□□□ -2.05
CD46-213ENST00000471987 HS3ST2Q9Y278 367 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 BTRCQ9Y297 605 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 LMTK2Q8IWU2 1503 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 CCDC88BA6NC98 1476 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 TEX14Q8IWB6 1497 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 SIGLEC1Q9BZZ2 1709 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 PPRC1Q5VV67 1664 aaKnown RBP2.25□□□□□ -2.05
CD46-213ENST00000471987 BRCA1P38398 1863 aaKnown RBP2.24□□□□□ -2.05
CD46-213ENST00000471987 ZNF106Q9H2Y7 1883 aaKnown RBP2.24□□□□□ -2.05
CD46-213ENST00000471987 CLASP1Q7Z460 1538 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 ZNF608Q9ULD9 1512 aaPredicted RBP2.24□□□□□ -2.05
CD46-213ENST00000471987 A0A0G2JLM5 398 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 FAM240AA0A1B0GVK7 77 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 A6NDN8 102 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 IFITM5A6NNB3 132 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 CCL25O15444 150 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 HPRT1P00492 218 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 MOSP00540 346 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 FABP3P05413 133 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 GKN3PP0CG01 181 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 ZNF250P15622 560 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 GABRG2P18507 467 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 TCN2P20062 427 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 PSMB9P28065 219 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 GABRA2P47869 451 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 FABP6P51161 128 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 KRTAP12-4P60329 112 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 SLC35A2P78381 396 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 RHOGP84095 191 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 PSG9Q00887 426 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 GNA12Q03113 381 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 IAH1Q2TAA2 248 aaPredicted RBP2.24□□□□□ -2.05
CD46-213ENST00000471987 CEACAM16Q2WEN9 425 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 SCGB2B2Q4G0G5 96 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 LDLRAD2Q5SZI1 272 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 ARL9Q6T311 187 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 UGT2A3Q6UWM9 527 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 GOLT1AQ6ZVE7 132 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 MRPL55Q7Z7F7 128 aaKnown RBP2.24□□□□□ -2.05
CD46-213ENST00000471987 HMGN2P46Q86SG4 172 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 LRP11Q86VZ4 500 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 CBLN2Q8IUK8 224 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 UBALD2Q8IYN6 164 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 GAPTQ8N292 157 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 OR10G2Q8NGC3 310 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 OR5AR1Q8NGP9 310 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 OR10R2Q8NGX6 335 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 OR2G2Q8NGZ5 317 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 OR5W2Q8NH69 310 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 ZNF418Q8TF45 676 aaPredicted RBP2.24□□□□□ -2.05
CD46-213ENST00000471987 CYGBQ8WWM9 190 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms