RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 CEBPZOSA8MTT3 80 aa8.84□□□□□ -0.99
APLF-204ENST00000471727 H3BQ15 152 aa8.84□□□□□ -0.99
APLF-204ENST00000471727 PRRG2O14669 202 aa8.84□□□□□ -0.99
APLF-204ENST00000471727 ST8SIA5O15466 376 aa8.84□□□□□ -0.99
APLF-204ENST00000471727 BCL2P10415 239 aa8.84□□□□□ -0.99
APLF-204ENST00000471727 BRWD1-AS2P59051 145 aa8.84□□□□□ -0.99
APLF-204ENST00000471727 SPCS3P61009 180 aa8.84□□□□□ -0.99
APLF-204ENST00000471727 ERVK-16P61578 105 aa8.84□□□□□ -0.99
APLF-204ENST00000471727 VWC2Q2TAL6 325 aa8.84□□□□□ -0.99
APLF-204ENST00000471727 PDLIM3Q53GG5 364 aaPredicted RBP8.84□□□□□ -0.99
APLF-204ENST00000471727 LRP11Q86VZ4 500 aa8.84□□□□□ -0.99
APLF-204ENST00000471727 ZNF709Q8N972 641 aa8.84□□□□□ -0.99
APLF-204ENST00000471727 PRSS33Q8NF86 280 aa8.84□□□□□ -0.99
APLF-204ENST00000471727 RFESDQ8TAC1 157 aa8.84□□□□□ -0.99
APLF-204ENST00000471727 ITLN1Q8WWA0 313 aa8.84□□□□□ -0.99
APLF-204ENST00000471727 ADTRPQ96IZ2 230 aa8.84□□□□□ -0.99
APLF-204ENST00000471727 ZNF251Q9BRH9 671 aa8.84□□□□□ -0.99
APLF-204ENST00000471727 RSG1Q9BU20 258 aa8.84□□□□□ -0.99
APLF-204ENST00000471727 GGACTQ9BVM4 153 aa8.84□□□□□ -0.99
APLF-204ENST00000471727 SAV1Q9H4B6 383 aaPredicted RBP8.84□□□□□ -0.99
APLF-204ENST00000471727 CALYQ9NYX4 217 aa8.84□□□□□ -0.99
APLF-204ENST00000471727 VAX2Q9UIW0 290 aa8.84□□□□□ -0.99
APLF-204ENST00000471727 PUS1Q9Y606 427 aaKnown RBP eCLIP8.84□□□□□ -0.99
APLF-204ENST00000471727 IGHV3-43A0A0B4J1X8 118 aa8.83□□□□□ -1
APLF-204ENST00000471727 LINC00473A8K010 186 aa8.83□□□□□ -1
APLF-204ENST00000471727 PMS2P5A8MQ11 134 aa8.83□□□□□ -1
APLF-204ENST00000471727 VSTM5A8MXK1 200 aa8.83□□□□□ -1
APLF-204ENST00000471727 MPDU1O75352 247 aa8.83□□□□□ -1
APLF-204ENST00000471727 RBMXL2O75526 392 aaKnown RBP8.83□□□□□ -1
APLF-204ENST00000471727 CGB3P0DN86 165 aa8.83□□□□□ -1
APLF-204ENST00000471727 CGB7P0DN87 165 aa8.83□□□□□ -1
APLF-204ENST00000471727 IGHV3-43DP0DP04 118 aa8.83□□□□□ -1
APLF-204ENST00000471727 NQO2P16083 231 aa8.83□□□□□ -1
APLF-204ENST00000471727 AGAP20933 346 aa8.83□□□□□ -1
APLF-204ENST00000471727 CD40P25942 277 aa8.83□□□□□ -1
APLF-204ENST00000471727 TNFAIP6P98066 277 aaPredicted RBP8.83□□□□□ -1
APLF-204ENST00000471727 MSMPQ1L6U9 139 aa8.83□□□□□ -1
APLF-204ENST00000471727 OR8G2PQ6IF36 304 aa8.83□□□□□ -1
APLF-204ENST00000471727 TMEM108Q6UXF1 575 aa8.83□□□□□ -1
APLF-204ENST00000471727 C1QL4Q86Z23 238 aa8.83□□□□□ -1
APLF-204ENST00000471727 TPRX1Q8N7U7 411 aa8.83□□□□□ -1
APLF-204ENST00000471727 OR4A16Q8NH70 328 aa8.83□□□□□ -1
APLF-204ENST00000471727 RCC1LQ96I51 464 aaKnown RBP8.83□□□□□ -1
APLF-204ENST00000471727 S1PR3Q99500 378 aa8.83□□□□□ -1
APLF-204ENST00000471727 GNG13Q9P2W3 67 aa8.83□□□□□ -1
APLF-204ENST00000471727 PTPRBP23467 1997 aa8.83□□□□□ -1
APLF-204ENST00000471727 TRGV10A0A0A0MS01 117 aa8.83□□□□□ -1
APLF-204ENST00000471727 CTXND1A0A1B0GTU2 59 aa8.83□□□□□ -1
APLF-204ENST00000471727 UBE2L5PA0A1B0GUS4 154 aa8.83□□□□□ -1
APLF-204ENST00000471727 MAP1LC3B2A6NCE7 125 aa8.83□□□□□ -1
APLF-204ENST00000471727 SPRY3O43610 288 aa8.83□□□□□ -1
APLF-204ENST00000471727 OR2C1O95371 312 aa8.83□□□□□ -1
APLF-204ENST00000471727 IFNA17P01571 189 aa8.83□□□□□ -1
APLF-204ENST00000471727 IRF2P14316 349 aa8.83□□□□□ -1
APLF-204ENST00000471727 RAB5AP20339 215 aa8.83□□□□□ -1
APLF-204ENST00000471727 THBS3P49746 956 aa8.83□□□□□ -1
APLF-204ENST00000471727 LOXL3P58215 753 aa8.83□□□□□ -1
APLF-204ENST00000471727 OR2B11Q5JQS5 317 aa8.83□□□□□ -1
APLF-204ENST00000471727 NCR3LG1Q68D85 454 aa8.83□□□□□ -1
APLF-204ENST00000471727 BTNL3Q6UXE8 466 aa8.83□□□□□ -1
APLF-204ENST00000471727 LINC00518Q8N0U6 118 aa8.83□□□□□ -1
APLF-204ENST00000471727 CYB561D1Q8N8Q1 229 aa8.83□□□□□ -1
APLF-204ENST00000471727 OR4S2Q8NH73 311 aa8.83□□□□□ -1
APLF-204ENST00000471727 CORO2AQ92828 525 aa8.83□□□□□ -1
APLF-204ENST00000471727 RAB39BQ96DA2 213 aa8.83□□□□□ -1
APLF-204ENST00000471727 ACTR3CQ9C0K3 210 aaPredicted RBP8.83□□□□□ -1
APLF-204ENST00000471727 MAP1LC3BQ9GZQ8 125 aa8.83□□□□□ -1
APLF-204ENST00000471727 ZNF665Q9H7R5 613 aa8.83□□□□□ -1
APLF-204ENST00000471727 LINC00574Q9H8X3 128 aa8.83□□□□□ -1
APLF-204ENST00000471727 TMEM242Q9NWH2 141 aa8.83□□□□□ -1
APLF-204ENST00000471727 GFOD1Q9NXC2 390 aa8.83□□□□□ -1
APLF-204ENST00000471727 ZNF318Q5VUA4 2279 aa8.83□□□□□ -1
APLF-204ENST00000471727 MUC3AQ02505 3323 aa8.82□□□□□ -1
APLF-204ENST00000471727 KBTBD11-OT1A0A1B0GTJ5 212 aa8.82□□□□□ -1
APLF-204ENST00000471727 ZNF729A6NN14 1252 aaPredicted RBP8.82□□□□□ -1
APLF-204ENST00000471727 DEFB108AA8MXU0 73 aa8.82□□□□□ -1
APLF-204ENST00000471727 C16orf97H3BN30 126 aa8.82□□□□□ -1
APLF-204ENST00000471727 M0R1X1 148 aa8.82□□□□□ -1
APLF-204ENST00000471727 CYB5BO43169 146 aa8.82□□□□□ -1
APLF-204ENST00000471727 ZG16O60844 167 aa8.82□□□□□ -1
APLF-204ENST00000471727 FCGR3BO75015 233 aa8.82□□□□□ -1
APLF-204ENST00000471727 S100A6P06703 90 aa8.82□□□□□ -1
APLF-204ENST00000471727 TNFRSF1AP19438 455 aa8.82□□□□□ -1
APLF-204ENST00000471727 EDDM3BP56851 147 aa8.82□□□□□ -1
APLF-204ENST00000471727 ZNF726P1Q15940 193 aa8.82□□□□□ -1
APLF-204ENST00000471727 PRAMEF5Q5TYX0 476 aa8.82□□□□□ -1
APLF-204ENST00000471727 STUMQ69YW2 141 aa8.82□□□□□ -1
APLF-204ENST00000471727 LCN15Q6UWW0 184 aa8.82□□□□□ -1
APLF-204ENST00000471727 ETV3LQ6ZN32 361 aa8.82□□□□□ -1
APLF-204ENST00000471727 OR10A7Q8NGE5 316 aa8.82□□□□□ -1
APLF-204ENST00000471727 LHX4Q969G2 390 aa8.82□□□□□ -1
APLF-204ENST00000471727 C20orf24Q9BUV8 137 aa8.82□□□□□ -1
APLF-204ENST00000471727 MANBALQ9NQG1 85 aa8.82□□□□□ -1
APLF-204ENST00000471727 CLN8Q9UBY8 286 aa8.82□□□□□ -1
APLF-204ENST00000471727 TGOLN2O43493 480 aa8.81□□□□□ -1
APLF-204ENST00000471727 IGHV1-46P01743 117 aa8.81□□□□□ -1
APLF-204ENST00000471727 TFF1P04155 84 aa8.81□□□□□ -1
APLF-204ENST00000471727 CD55P08174 381 aa8.81□□□□□ -1
APLF-204ENST00000471727 MDKP21741 143 aaPredicted RBP8.81□□□□□ -1
APLF-204ENST00000471727 FGF7P21781 194 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms