RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 SMCO4Q9NRQ5 59 aa15.47■□□□□ 0.07
COL20A1-205ENST00000471582 RNF7Q9UBF6 113 aa15.47■□□□□ 0.07
COL20A1-205ENST00000471582 MAP1BP46821 2468 aaKnown RBP15.46■□□□□ 0.07
COL20A1-205ENST00000471582 A0A0G2JNJ9 132 aa15.46■□□□□ 0.07
COL20A1-205ENST00000471582 ITGB1BP1O14713 200 aa15.46■□□□□ 0.07
COL20A1-205ENST00000471582 TNFSF4P23510 183 aa15.46■□□□□ 0.07
COL20A1-205ENST00000471582 CCL20P78556 96 aa15.46■□□□□ 0.07
COL20A1-205ENST00000471582 FLI1Q01543 452 aaPredicted RBP15.46■□□□□ 0.07
COL20A1-205ENST00000471582 H2BFWTQ7Z2G1 175 aa15.46■□□□□ 0.07
COL20A1-205ENST00000471582 Q8TCH9 128 aa15.46■□□□□ 0.07
COL20A1-205ENST00000471582 SDSLQ96GA7 329 aa15.46■□□□□ 0.07
COL20A1-205ENST00000471582 CIB3Q96Q77 187 aaPredicted RBP15.46■□□□□ 0.07
COL20A1-205ENST00000471582 Q9UFV3 132 aa15.46■□□□□ 0.07
COL20A1-205ENST00000471582 CADP27708 2225 aa15.46■□□□□ 0.07
COL20A1-205ENST00000471582 CACNA1DQ01668 2161 aa15.46■□□□□ 0.06
COL20A1-205ENST00000471582 DEFB108AA8MXU0 73 aa15.45■□□□□ 0.06
COL20A1-205ENST00000471582 IGHV1-46P01743 117 aa15.45■□□□□ 0.06
COL20A1-205ENST00000471582 DUTP33316 252 aaKnown RBP15.45■□□□□ 0.06
COL20A1-205ENST00000471582 LOXL3P58215 753 aa15.45■□□□□ 0.06
COL20A1-205ENST00000471582 TNFAIP6P98066 277 aaPredicted RBP15.45■□□□□ 0.06
COL20A1-205ENST00000471582 TMEM108Q6UXF1 575 aa15.45■□□□□ 0.06
COL20A1-205ENST00000471582 C22orf34Q6ZV56 151 aa15.45■□□□□ 0.06
COL20A1-205ENST00000471582 ZNRF1Q8ND25 227 aa15.45■□□□□ 0.06
COL20A1-205ENST00000471582 UNKLQ9H9P5 680 aaKnown RBP15.45■□□□□ 0.06
COL20A1-205ENST00000471582 GCM1Q9NP62 436 aa15.45■□□□□ 0.06
COL20A1-205ENST00000471582 A0A1B0GV50 99 aa15.45■□□□□ 0.06
COL20A1-205ENST00000471582 FAM90A9PA6NNJ1 464 aa15.45■□□□□ 0.06
COL20A1-205ENST00000471582 C16orf97H3BN30 126 aa15.45■□□□□ 0.06
COL20A1-205ENST00000471582 CGB3P0DN86 165 aa15.45■□□□□ 0.06
COL20A1-205ENST00000471582 CGB7P0DN87 165 aa15.45■□□□□ 0.06
COL20A1-205ENST00000471582 CTRB1P17538 263 aa15.45■□□□□ 0.06
COL20A1-205ENST00000471582 PTAFRP25105 342 aa15.45■□□□□ 0.06
COL20A1-205ENST00000471582 SLC38A11Q08AI6 406 aa15.45■□□□□ 0.06
COL20A1-205ENST00000471582 CTRB2Q6GPI1 263 aa15.45■□□□□ 0.06
COL20A1-205ENST00000471582 SFT2D1Q8WV19 159 aa15.45■□□□□ 0.06
COL20A1-205ENST00000471582 WDR61Q9GZS3 305 aaKnown RBP15.45■□□□□ 0.06
COL20A1-205ENST00000471582 CALYQ9NYX4 217 aa15.45■□□□□ 0.06
COL20A1-205ENST00000471582 RP1L1Q8IWN7 2480 aaPredicted RBP15.44■□□□□ 0.06
COL20A1-205ENST00000471582 MARCH11A6NNE9 402 aa15.44■□□□□ 0.06
COL20A1-205ENST00000471582 RBFOX2O43251 390 aaKnown RBP eCLIP15.44■□□□□ 0.06
COL20A1-205ENST00000471582 ATP6V1FQ16864 119 aa15.44■□□□□ 0.06
COL20A1-205ENST00000471582 AARDQ4LEZ3 155 aa15.44■□□□□ 0.06
COL20A1-205ENST00000471582 AWAT1Q58HT5 328 aa15.44■□□□□ 0.06
COL20A1-205ENST00000471582 ZNF506Q5JVG8 444 aa15.44■□□□□ 0.06
COL20A1-205ENST00000471582 STUMQ69YW2 141 aa15.44■□□□□ 0.06
COL20A1-205ENST00000471582 RSG1Q9BU20 258 aa15.44■□□□□ 0.06
COL20A1-205ENST00000471582 SH3BGRL2Q9UJC5 107 aa15.44■□□□□ 0.06
COL20A1-205ENST00000471582 GAB2Q9UQC2 676 aa15.44■□□□□ 0.06
COL20A1-205ENST00000471582 SCAF4O95104 1147 aaKnown RBP15.43■□□□□ 0.06
COL20A1-205ENST00000471582 LY86O95711 162 aa15.43■□□□□ 0.06
COL20A1-205ENST00000471582 EDDM3BP56851 147 aa15.43■□□□□ 0.06
COL20A1-205ENST00000471582 RHEBQ15382 184 aa15.43■□□□□ 0.06
COL20A1-205ENST00000471582 PRR30Q53SZ7 412 aaPredicted RBP15.43■□□□□ 0.06
COL20A1-205ENST00000471582 DTD1Q8TEA8 209 aa15.43■□□□□ 0.06
COL20A1-205ENST00000471582 PINX1Q96BK5 328 aaKnown RBP15.43■□□□□ 0.06
COL20A1-205ENST00000471582 OR4C12Q96R67 309 aa15.43■□□□□ 0.06
COL20A1-205ENST00000471582 RARRES2Q99969 163 aa15.43■□□□□ 0.06
COL20A1-205ENST00000471582 FAM234AQ9H0X4 552 aa15.43■□□□□ 0.06
COL20A1-205ENST00000471582 TIMM9Q9Y5J7 89 aa15.43■□□□□ 0.06
COL20A1-205ENST00000471582 TLN1Q9Y490 2541 aaKnown RBP15.43■□□□□ 0.06
COL20A1-205ENST00000471582 PROP1O75360 226 aa15.43■□□□□ 0.06
COL20A1-205ENST00000471582 HPRT1P00492 218 aa15.43■□□□□ 0.06
COL20A1-205ENST00000471582 HSPB1P04792 205 aaKnown RBP15.43■□□□□ 0.06
COL20A1-205ENST00000471582 LTC4SQ16873 150 aa15.43■□□□□ 0.06
COL20A1-205ENST00000471582 SOHLH1Q5JUK2 328 aa15.43■□□□□ 0.06
COL20A1-205ENST00000471582 NCR3LG1Q68D85 454 aa15.43■□□□□ 0.06
COL20A1-205ENST00000471582 TUBA4BQ9H853 241 aa15.43■□□□□ 0.06
COL20A1-205ENST00000471582 JKAMPQ9P055 326 aa15.43■□□□□ 0.06
COL20A1-205ENST00000471582 MEX3AA1L020 520 aaKnown RBP15.42■□□□□ 0.06
COL20A1-205ENST00000471582 RAB7AP51149 207 aa15.42■□□□□ 0.06
COL20A1-205ENST00000471582 CENPVQ7Z7K6 275 aaPredicted RBP15.42■□□□□ 0.06
COL20A1-205ENST00000471582 C15orf54Q8N8G6 183 aa15.42■□□□□ 0.06
COL20A1-205ENST00000471582 CLDND2Q8NHS1 167 aa15.42■□□□□ 0.06
COL20A1-205ENST00000471582 MBD3L1Q8WWY6 194 aa15.42■□□□□ 0.06
COL20A1-205ENST00000471582 TAF15Q92804 592 aaKnown RBP eCLIP15.42■□□□□ 0.06
COL20A1-205ENST00000471582 R3HDM4Q96D70 268 aa15.42■□□□□ 0.06
COL20A1-205ENST00000471582 DIRC2Q96SL1 478 aa15.42■□□□□ 0.06
COL20A1-205ENST00000471582 IFI27L2Q9H2X8 130 aa15.42■□□□□ 0.06
COL20A1-205ENST00000471582 RPRMQ9NS64 109 aa15.42■□□□□ 0.06
COL20A1-205ENST00000471582 C7orf77A4D0Y5 90 aa15.41■□□□□ 0.06
COL20A1-205ENST00000471582 KIR2DS2P43631 304 aa15.41■□□□□ 0.06
COL20A1-205ENST00000471582 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.41■□□□□ 0.06
COL20A1-205ENST00000471582 RPS10P5Q9NQ39 176 aa15.41■□□□□ 0.06
COL20A1-205ENST00000471582 CLN8Q9UBY8 286 aa15.41■□□□□ 0.06
COL20A1-205ENST00000471582 KBTBD11-OT1A0A1B0GTJ5 212 aa15.41■□□□□ 0.06
COL20A1-205ENST00000471582 OR13C7P0DN81 318 aa15.41■□□□□ 0.06
COL20A1-205ENST00000471582 KLRB1Q12918 225 aa15.41■□□□□ 0.06
COL20A1-205ENST00000471582 ICAM4Q14773 271 aa15.41■□□□□ 0.06
COL20A1-205ENST00000471582 TMEM30BQ3MIR4 351 aa15.41■□□□□ 0.06
COL20A1-205ENST00000471582 KHDC3LQ587J8 217 aa15.41■□□□□ 0.06
COL20A1-205ENST00000471582 TMEM41BQ5BJD5 291 aa15.41■□□□□ 0.06
COL20A1-205ENST00000471582 TMEM147Q9BVK8 224 aa15.41■□□□□ 0.06
COL20A1-205ENST00000471582 MLXQ9UH92 298 aa15.41■□□□□ 0.06
COL20A1-205ENST00000471582 PRELID3BQ9Y3B1 194 aa15.41■□□□□ 0.06
COL20A1-205ENST00000471582 PLCE1Q9P212 2302 aa15.4■□□□□ 0.06
COL20A1-205ENST00000471582 UBE2L5PA0A1B0GUS4 154 aa15.4■□□□□ 0.06
COL20A1-205ENST00000471582 COLCA2A8K830 154 aa15.4■□□□□ 0.06
COL20A1-205ENST00000471582 PMS2P5A8MQ11 134 aa15.4■□□□□ 0.06
COL20A1-205ENST00000471582 M0R036 132 aa15.4■□□□□ 0.06
COL20A1-205ENST00000471582 M0R1X1 148 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms