RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 ZNF230Q9UIE0 474 aaPredicted RBP5.11□□□□□ -1.59
HDAC1-204ENST00000471488 TP53TG1Q9Y2A0 90 aa5.11□□□□□ -1.59
HDAC1-204ENST00000471488 EXOSC1Q9Y3B2 195 aaKnown RBP5.11□□□□□ -1.59
HDAC1-204ENST00000471488 MUC4Q99102 2169 aa5.11□□□□□ -1.59
HDAC1-204ENST00000471488 DPPA5A6NC42 116 aa5.1□□□□□ -1.59
HDAC1-204ENST00000471488 FAM223BA6NKX1 122 aa5.1□□□□□ -1.59
HDAC1-204ENST00000471488 GGCTO75223 188 aaKnown RBP5.1□□□□□ -1.59
HDAC1-204ENST00000471488 ACTL6BO94805 426 aa5.1□□□□□ -1.59
HDAC1-204ENST00000471488 SPDEFO95238 335 aa5.1□□□□□ -1.59
HDAC1-204ENST00000471488 MGMTP16455 207 aa5.1□□□□□ -1.59
HDAC1-204ENST00000471488 CEACAM6P40199 344 aa5.1□□□□□ -1.59
HDAC1-204ENST00000471488 TMED1Q13445 227 aa5.1□□□□□ -1.59
HDAC1-204ENST00000471488 MED21Q13503 144 aa5.1□□□□□ -1.59
HDAC1-204ENST00000471488 FAM106AQ4KMX7 169 aa5.1□□□□□ -1.59
HDAC1-204ENST00000471488 FAM71F2Q6NXP2 309 aa5.1□□□□□ -1.59
HDAC1-204ENST00000471488 CLEC19AQ6UXS0 136 aa5.1□□□□□ -1.59
HDAC1-204ENST00000471488 ASCL4Q6XD76 172 aa5.1□□□□□ -1.59
HDAC1-204ENST00000471488 PDPNQ86YL7 162 aa5.1□□□□□ -1.59
HDAC1-204ENST00000471488 WFDC3Q8IUB2 231 aa5.1□□□□□ -1.59
HDAC1-204ENST00000471488 FAM223AQ8IWN6 122 aa5.1□□□□□ -1.59
HDAC1-204ENST00000471488 OR2C3Q8N628 320 aa5.1□□□□□ -1.59
HDAC1-204ENST00000471488 ZNF383Q8NA42 475 aa5.1□□□□□ -1.59
HDAC1-204ENST00000471488 ADAD2Q8NCV1 583 aaKnown RBP5.1□□□□□ -1.59
HDAC1-204ENST00000471488 OR5AN1Q8NGI8 311 aa5.1□□□□□ -1.59
HDAC1-204ENST00000471488 OR13C5Q8NGS8 318 aa5.1□□□□□ -1.59
HDAC1-204ENST00000471488 NRBF2Q96F24 287 aa5.1□□□□□ -1.59
HDAC1-204ENST00000471488 TMEM68Q96MH6 324 aa5.1□□□□□ -1.59
HDAC1-204ENST00000471488 NEDD4LQ96PU5 975 aa5.1□□□□□ -1.59
HDAC1-204ENST00000471488 RNF5Q99942 180 aa5.1□□□□□ -1.59
HDAC1-204ENST00000471488 FAAP24Q9BTP7 215 aa5.1□□□□□ -1.59
HDAC1-204ENST00000471488 OR1A1Q9P1Q5 309 aa5.1□□□□□ -1.59
HDAC1-204ENST00000471488 AASSQ9UDR5 926 aa5.1□□□□□ -1.59
HDAC1-204ENST00000471488 ARL2BPQ9Y2Y0 163 aa5.1□□□□□ -1.59
HDAC1-204ENST00000471488 IGLV2-18A0A075B6J9 118 aa5.09□□□□□ -1.59
HDAC1-204ENST00000471488 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.09□□□□□ -1.59
HDAC1-204ENST00000471488 A0A1B0GVY2 172 aa5.09□□□□□ -1.59
HDAC1-204ENST00000471488 SNTNA6NMZ2 147 aa5.09□□□□□ -1.59
HDAC1-204ENST00000471488 UBE2CO00762 179 aa5.09□□□□□ -1.59
HDAC1-204ENST00000471488 PDCD6O75340 191 aa5.09□□□□□ -1.59
HDAC1-204ENST00000471488 CA11O75493 328 aa5.09□□□□□ -1.59
HDAC1-204ENST00000471488 GPX5O75715 221 aa5.09□□□□□ -1.59
HDAC1-204ENST00000471488 GLAP06280 429 aa5.09□□□□□ -1.59
HDAC1-204ENST00000471488 RPA2P15927 270 aa5.09□□□□□ -1.59
HDAC1-204ENST00000471488 TFPI2P48307 235 aa5.09□□□□□ -1.59
HDAC1-204ENST00000471488 MFAP2P55001 183 aa5.09□□□□□ -1.59
HDAC1-204ENST00000471488 KDM4DQ6B0I6 523 aa5.09□□□□□ -1.59
HDAC1-204ENST00000471488 C19orf35Q6ZS72 473 aa5.09□□□□□ -1.59
HDAC1-204ENST00000471488 AMIGO2Q86SJ2 522 aa5.09□□□□□ -1.59
HDAC1-204ENST00000471488 APRG1Q8IVJ8 170 aa5.09□□□□□ -1.59
HDAC1-204ENST00000471488 OR11H2Q8NH07 326 aa5.09□□□□□ -1.59
HDAC1-204ENST00000471488 OR4A5Q8NH83 315 aa5.09□□□□□ -1.59
HDAC1-204ENST00000471488 EDARADDQ8WWZ3 215 aa5.09□□□□□ -1.59
HDAC1-204ENST00000471488 SRSF12Q8WXF0 261 aaKnown RBP5.09□□□□□ -1.59
HDAC1-204ENST00000471488 LGALS12Q96DT0 336 aa5.09□□□□□ -1.59
HDAC1-204ENST00000471488 SULT4A1Q9BR01 284 aa5.09□□□□□ -1.59
HDAC1-204ENST00000471488 DCUN1D5Q9BTE7 237 aa5.09□□□□□ -1.59
HDAC1-204ENST00000471488 C6orf62Q9GZU0 229 aaPredicted RBP5.09□□□□□ -1.59
HDAC1-204ENST00000471488 C11orf54Q9H0W9 315 aaPredicted RBP5.09□□□□□ -1.59
HDAC1-204ENST00000471488 AMBNQ9NP70 447 aa5.09□□□□□ -1.59
HDAC1-204ENST00000471488 FBXL7Q9UJT9 491 aa5.09□□□□□ -1.59
HDAC1-204ENST00000471488 LRRC42Q9Y546 428 aa5.09□□□□□ -1.59
HDAC1-204ENST00000471488 RBM7Q9Y580 266 aaKnown RBP5.09□□□□□ -1.59
HDAC1-204ENST00000471488 IGKV3-7A0A075B6H7 116 aa5.08□□□□□ -1.6
HDAC1-204ENST00000471488 PNMA8CA0A1B0GUJ8 204 aa5.08□□□□□ -1.6
HDAC1-204ENST00000471488 TMEM213A2RRL7 107 aa5.08□□□□□ -1.6
HDAC1-204ENST00000471488 SAC3D1A6NKF1 404 aa5.08□□□□□ -1.6
HDAC1-204ENST00000471488 GSTT2P0CG29 244 aa5.08□□□□□ -1.6
HDAC1-204ENST00000471488 GSTT2BP0CG30 244 aa5.08□□□□□ -1.6
HDAC1-204ENST00000471488 HOXB6P17509 224 aaKnown RBP5.08□□□□□ -1.6
HDAC1-204ENST00000471488 ZBTB25P24278 435 aa5.08□□□□□ -1.6
HDAC1-204ENST00000471488 MAP2K4P45985 399 aa5.08□□□□□ -1.6
HDAC1-204ENST00000471488 SNRPGP62308 76 aaKnown RBP5.08□□□□□ -1.6
HDAC1-204ENST00000471488 SSBP2P81877 361 aaPredicted RBP5.08□□□□□ -1.6
HDAC1-204ENST00000471488 HMGN3Q15651 99 aa5.08□□□□□ -1.6
HDAC1-204ENST00000471488 RTL8BQ17RB0 113 aa5.08□□□□□ -1.6
HDAC1-204ENST00000471488 ZIK1Q3SY52 487 aaPredicted RBP5.08□□□□□ -1.6
HDAC1-204ENST00000471488 VMA21Q3ZAQ7 101 aa5.08□□□□□ -1.6
HDAC1-204ENST00000471488 ZNF529Q6P280 563 aa5.08□□□□□ -1.6
HDAC1-204ENST00000471488 C6orf201Q7Z4U5 140 aa5.08□□□□□ -1.6
HDAC1-204ENST00000471488 UBE2DNLQ8IWF7 75 aa5.08□□□□□ -1.6
HDAC1-204ENST00000471488 ZNF645Q8N7E2 425 aa5.08□□□□□ -1.6
HDAC1-204ENST00000471488 GVQW1Q8N7I0 195 aa5.08□□□□□ -1.6
HDAC1-204ENST00000471488 NECAP1Q8NC96 275 aa5.08□□□□□ -1.6
HDAC1-204ENST00000471488 CD300LFQ8TDQ1 290 aa5.08□□□□□ -1.6
HDAC1-204ENST00000471488 FYTTD1Q96QD9 318 aaKnown RBP5.08□□□□□ -1.6
HDAC1-204ENST00000471488 ERVK13-1Q9NX77 482 aa5.08□□□□□ -1.6
HDAC1-204ENST00000471488 APLNQ9ULZ1 77 aa5.08□□□□□ -1.6
HDAC1-204ENST00000471488 ORC6Q9Y5N6 252 aa5.08□□□□□ -1.6
HDAC1-204ENST00000471488 PKHD1P08F94 4074 aa5.08□□□□□ -1.6
HDAC1-204ENST00000471488 VPS13DQ5THJ4 4388 aa5.07□□□□□ -1.6
HDAC1-204ENST00000471488 IGHV4-4A0A075B6R2 117 aa5.07□□□□□ -1.6
HDAC1-204ENST00000471488 TRAV8-7A0A075B6U6 113 aa5.07□□□□□ -1.6
HDAC1-204ENST00000471488 IGHV3OR16-8A0A075B7F1 116 aa5.07□□□□□ -1.6
HDAC1-204ENST00000471488 HMX3A6NHT5 357 aa5.07□□□□□ -1.6
HDAC1-204ENST00000471488 LGALS9O00182 355 aa5.07□□□□□ -1.6
HDAC1-204ENST00000471488 RAB27BO00194 218 aa5.07□□□□□ -1.6
HDAC1-204ENST00000471488 BET1O15155 118 aa5.07□□□□□ -1.6
HDAC1-204ENST00000471488 SC5DO75845 299 aa5.07□□□□□ -1.6
HDAC1-204ENST00000471488 CA1P00915 261 aaPredicted RBP5.07□□□□□ -1.6
HDAC1-204ENST00000471488 IGLV2-23P01705 113 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms