RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 AIREO43918 545 aa6.96□□□□□ -1.3
CPSF4-211ENST00000471455 TPPPO94811 219 aa6.96□□□□□ -1.3
CPSF4-211ENST00000471455 OR2A4O95047 310 aa6.96□□□□□ -1.3
CPSF4-211ENST00000471455 BRI3O95415 125 aa6.96□□□□□ -1.3
CPSF4-211ENST00000471455 BAG2O95816 211 aa6.96□□□□□ -1.3
CPSF4-211ENST00000471455 EGR2P11161 476 aaPredicted RBP6.96□□□□□ -1.3
CPSF4-211ENST00000471455 ZBTB25P24278 435 aa6.96□□□□□ -1.3
CPSF4-211ENST00000471455 RPS16P62249 146 aaKnown RBP6.96□□□□□ -1.3
CPSF4-211ENST00000471455 KLF5Q13887 457 aaPredicted RBP6.96□□□□□ -1.3
CPSF4-211ENST00000471455 FXYD3Q14802 87 aa6.96□□□□□ -1.3
CPSF4-211ENST00000471455 PSG5Q15238 335 aa6.96□□□□□ -1.3
CPSF4-211ENST00000471455 RPEL1Q2QD12 228 aa6.96□□□□□ -1.3
CPSF4-211ENST00000471455 RPL39P5Q59GN2 51 aa6.96□□□□□ -1.3
CPSF4-211ENST00000471455 TTC23Q5W5X9 447 aa6.96□□□□□ -1.3
CPSF4-211ENST00000471455 SIGIRRQ6IA17 410 aa6.96□□□□□ -1.3
CPSF4-211ENST00000471455 GLDNQ6ZMI3 551 aaPredicted RBP6.96□□□□□ -1.3
CPSF4-211ENST00000471455 SETD6Q8TBK2 473 aa6.96□□□□□ -1.3
CPSF4-211ENST00000471455 TMEM80Q96HE8 168 aa6.96□□□□□ -1.3
CPSF4-211ENST00000471455 USMG5Q96IX5 58 aa6.96□□□□□ -1.3
CPSF4-211ENST00000471455 PGLYRP3Q96LB9 341 aa6.96□□□□□ -1.3
CPSF4-211ENST00000471455 DERL3Q96Q80 235 aa6.96□□□□□ -1.3
CPSF4-211ENST00000471455 SULT4A1Q9BR01 284 aa6.96□□□□□ -1.3
CPSF4-211ENST00000471455 TMEM59Q9BXS4 323 aa6.96□□□□□ -1.3
CPSF4-211ENST00000471455 SLC2A8Q9NY64 477 aa6.96□□□□□ -1.3
CPSF4-211ENST00000471455 PEF1Q9UBV8 284 aaKnown RBP6.96□□□□□ -1.3
CPSF4-211ENST00000471455 GAB2Q9UQC2 676 aa6.96□□□□□ -1.3
CPSF4-211ENST00000471455 CEPT1Q9Y6K0 416 aa6.96□□□□□ -1.3
CPSF4-211ENST00000471455 A0A1W2PPK0 400 aa6.95□□□□□ -1.3
CPSF4-211ENST00000471455 ANKRD34BA5PLL1 514 aa6.95□□□□□ -1.3
CPSF4-211ENST00000471455 ERICH4A6NGS2 130 aa6.95□□□□□ -1.3
CPSF4-211ENST00000471455 H3BNX3 289 aa6.95□□□□□ -1.3
CPSF4-211ENST00000471455 MYL12BO14950 172 aa6.95□□□□□ -1.3
CPSF4-211ENST00000471455 SLC25A17O43808 307 aa6.95□□□□□ -1.3
CPSF4-211ENST00000471455 WBP4O75554 376 aaKnown RBP6.95□□□□□ -1.3
CPSF4-211ENST00000471455 CD1AP06126 327 aa6.95□□□□□ -1.3
CPSF4-211ENST00000471455 SYNJ2BPP57105 145 aa6.95□□□□□ -1.3
CPSF4-211ENST00000471455 RPS11P62280 158 aaKnown RBP eCLIP6.95□□□□□ -1.3
CPSF4-211ENST00000471455 RPS27AP62979 156 aaKnown RBP6.95□□□□□ -1.3
CPSF4-211ENST00000471455 SMN1Q16637 294 aaKnown RBP6.95□□□□□ -1.3
CPSF4-211ENST00000471455 FAM209BQ5JX69 171 aa6.95□□□□□ -1.3
CPSF4-211ENST00000471455 GLT8D1Q68CQ7 371 aa6.95□□□□□ -1.3
CPSF4-211ENST00000471455 ZFP41Q8N8Y5 198 aa6.95□□□□□ -1.3
CPSF4-211ENST00000471455 SETD9Q8NE22 299 aa6.95□□□□□ -1.3
CPSF4-211ENST00000471455 KCNG3Q8TAE7 436 aa6.95□□□□□ -1.3
CPSF4-211ENST00000471455 PLEKHJ1Q9NW61 149 aa6.95□□□□□ -1.3
CPSF4-211ENST00000471455 SMPD3Q9NY59 655 aaPredicted RBP6.95□□□□□ -1.3
CPSF4-211ENST00000471455 TRBV6-6A0A0A6YYG2 114 aa6.94□□□□□ -1.3
CPSF4-211ENST00000471455 DYNC1I1O14576 645 aa6.94□□□□□ -1.3
CPSF4-211ENST00000471455 NAPSAO96009 420 aa6.94□□□□□ -1.3
CPSF4-211ENST00000471455 LALBAP00709 142 aa6.94□□□□□ -1.3
CPSF4-211ENST00000471455 CEACAM6P40199 344 aa6.94□□□□□ -1.3
CPSF4-211ENST00000471455 RANBP1P43487 201 aa6.94□□□□□ -1.3
CPSF4-211ENST00000471455 CD81P60033 236 aa6.94□□□□□ -1.3
CPSF4-211ENST00000471455 HLA-DRB3P79483 266 aa6.94□□□□□ -1.3
CPSF4-211ENST00000471455 ZNF880Q6PDB4 577 aa6.94□□□□□ -1.3
CPSF4-211ENST00000471455 C6orf201Q7Z4U5 140 aa6.94□□□□□ -1.3
CPSF4-211ENST00000471455 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.94□□□□□ -1.3
CPSF4-211ENST00000471455 BVESQ8NE79 360 aa6.94□□□□□ -1.3
CPSF4-211ENST00000471455 OR5T1Q8NG75 326 aa6.94□□□□□ -1.3
CPSF4-211ENST00000471455 DYNLRB2Q8TF09 96 aa6.94□□□□□ -1.3
CPSF4-211ENST00000471455 SNAPC3Q92966 411 aa6.94□□□□□ -1.3
CPSF4-211ENST00000471455 PTX4Q96A99 478 aa6.94□□□□□ -1.3
CPSF4-211ENST00000471455 ANAPC16Q96DE5 110 aa6.94□□□□□ -1.3
CPSF4-211ENST00000471455 ABHD14BQ96IU4 210 aa6.94□□□□□ -1.3
CPSF4-211ENST00000471455 PHB2Q99623 299 aa6.94□□□□□ -1.3
CPSF4-211ENST00000471455 AGMATQ9BSE5 352 aa6.94□□□□□ -1.3
CPSF4-211ENST00000471455 THAP7Q9BT49 309 aaPredicted RBP6.94□□□□□ -1.3
CPSF4-211ENST00000471455 URM1Q9BTM9 101 aaKnown RBP6.94□□□□□ -1.3
CPSF4-211ENST00000471455 FAAP24Q9BTP7 215 aa6.94□□□□□ -1.3
CPSF4-211ENST00000471455 TM2D1Q9BX74 207 aa6.94□□□□□ -1.3
CPSF4-211ENST00000471455 TINAGL1Q9GZM7 467 aaPredicted RBP6.94□□□□□ -1.3
CPSF4-211ENST00000471455 C12orf4Q9NQ89 552 aa6.94□□□□□ -1.3
CPSF4-211ENST00000471455 CSMD3Q7Z407 3707 aa6.94□□□□□ -1.3
CPSF4-211ENST00000471455 PNMA8CA0A1B0GUJ8 204 aa6.93□□□□□ -1.3
CPSF4-211ENST00000471455 EFCAB10A6NFE3 127 aa6.93□□□□□ -1.3
CPSF4-211ENST00000471455 NPIPB6E9PJ23 425 aa6.93□□□□□ -1.3
CPSF4-211ENST00000471455 MPPED1O15442 326 aa6.93□□□□□ -1.3
CPSF4-211ENST00000471455 CREBL2O60519 120 aaPredicted RBP6.93□□□□□ -1.3
CPSF4-211ENST00000471455 TUSC2O75896 110 aa6.93□□□□□ -1.3
CPSF4-211ENST00000471455 IGKV1-16P04430 117 aa6.93□□□□□ -1.3
CPSF4-211ENST00000471455 CSN3P07498 182 aa6.93□□□□□ -1.3
CPSF4-211ENST00000471455 CELP19835 753 aa6.93□□□□□ -1.3
CPSF4-211ENST00000471455 MAP2K4P45985 399 aa6.93□□□□□ -1.3
CPSF4-211ENST00000471455 SERPINB10P48595 397 aa6.93□□□□□ -1.3
CPSF4-211ENST00000471455 RTL8BQ17RB0 113 aa6.93□□□□□ -1.3
CPSF4-211ENST00000471455 ZNF343Q6P1L6 599 aa6.93□□□□□ -1.3
CPSF4-211ENST00000471455 DRAXINQ8NBI3 349 aaPredicted RBP6.93□□□□□ -1.3
CPSF4-211ENST00000471455 PHYHIPQ92561 330 aa6.93□□□□□ -1.3
CPSF4-211ENST00000471455 NEURL2Q9BR09 285 aa6.93□□□□□ -1.3
CPSF4-211ENST00000471455 C11orf54Q9H0W9 315 aaPredicted RBP6.93□□□□□ -1.3
CPSF4-211ENST00000471455 HIPK2Q9H2X6 1198 aa6.93□□□□□ -1.3
CPSF4-211ENST00000471455 PLEKHA3Q9HB20 300 aa6.93□□□□□ -1.3
CPSF4-211ENST00000471455 SLC35D1Q9NTN3 355 aa6.93□□□□□ -1.3
CPSF4-211ENST00000471455 COA4Q9NYJ1 87 aa6.93□□□□□ -1.3
CPSF4-211ENST00000471455 CLEC2DQ9UHP7 191 aa6.93□□□□□ -1.3
CPSF4-211ENST00000471455 FAM223BA6NKX1 122 aa6.92□□□□□ -1.3
CPSF4-211ENST00000471455 M0R1X1 148 aa6.92□□□□□ -1.3
CPSF4-211ENST00000471455 RRASP10301 218 aa6.92□□□□□ -1.3
CPSF4-211ENST00000471455 SRMP19623 302 aa6.92□□□□□ -1.3
CPSF4-211ENST00000471455 WNT4P56705 351 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms