RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 OR10J5Q8NHC4 309 aa16.29■□□□□ 0.2
SREBF1-210ENST00000471445 C5orf30Q96GV9 206 aa16.29■□□□□ 0.2
SREBF1-210ENST00000471445 TSNAXQ99598 290 aaKnown RBP16.29■□□□□ 0.2
SREBF1-210ENST00000471445 ATG5Q9H1Y0 275 aa16.29■□□□□ 0.2
SREBF1-210ENST00000471445 SDHAF2Q9NX18 166 aa16.29■□□□□ 0.2
SREBF1-210ENST00000471445 FOXA2Q9Y261 457 aaPredicted RBP16.29■□□□□ 0.2
SREBF1-210ENST00000471445 VSIG4Q9Y279 399 aa16.29■□□□□ 0.2
SREBF1-210ENST00000471445 CA2P00918 260 aa16.28■□□□□ 0.2
SREBF1-210ENST00000471445 OR8U9P0C7N5 309 aa16.28■□□□□ 0.2
SREBF1-210ENST00000471445 EGR2P11161 476 aaPredicted RBP16.28■□□□□ 0.2
SREBF1-210ENST00000471445 DTYMKP23919 212 aa16.28■□□□□ 0.2
SREBF1-210ENST00000471445 LUMP51884 338 aaPredicted RBP16.28■□□□□ 0.2
SREBF1-210ENST00000471445 SLC35D1Q9NTN3 355 aa16.28■□□□□ 0.2
SREBF1-210ENST00000471445 ELF5Q9UKW6 265 aaPredicted RBP16.28■□□□□ 0.2
SREBF1-210ENST00000471445 SSR3Q9UNL2 185 aa16.28■□□□□ 0.2
SREBF1-210ENST00000471445 NUBP2Q9Y5Y2 271 aa16.28■□□□□ 0.2
SREBF1-210ENST00000471445 IGKV1D-8A0A087WSZ0 117 aa16.27■□□□□ 0.2
SREBF1-210ENST00000471445 SNRPBP14678 240 aaKnown RBP16.27■□□□□ 0.2
SREBF1-210ENST00000471445 GNB1P62873 340 aa16.27■□□□□ 0.2
SREBF1-210ENST00000471445 C9orf66Q5T8R8 295 aa16.27■□□□□ 0.2
SREBF1-210ENST00000471445 SFXN4Q6P4A7 337 aa16.27■□□□□ 0.2
SREBF1-210ENST00000471445 FLYWCH2Q96CP2 140 aaKnown RBP16.27■□□□□ 0.2
SREBF1-210ENST00000471445 FAM103A1Q9BTL3 118 aaKnown RBP16.27■□□□□ 0.2
SREBF1-210ENST00000471445 OR51E2Q9H255 320 aa16.27■□□□□ 0.2
SREBF1-210ENST00000471445 TPSG1Q9NRR2 321 aa16.27■□□□□ 0.2
SREBF1-210ENST00000471445 DNAH9Q9NYC9 4486 aa16.26■□□□□ 0.19
SREBF1-210ENST00000471445 TALDO1P37837 337 aa16.26■□□□□ 0.19
SREBF1-210ENST00000471445 RPS16P62249 146 aaKnown RBP16.26■□□□□ 0.19
SREBF1-210ENST00000471445 ZNF616Q08AN1 781 aa16.26■□□□□ 0.19
SREBF1-210ENST00000471445 ZNF562Q6V9R5 426 aa16.26■□□□□ 0.19
SREBF1-210ENST00000471445 PPP1R27Q86WC6 154 aa16.26■□□□□ 0.19
SREBF1-210ENST00000471445 H1FOOQ8IZA3 346 aaPredicted RBP16.26■□□□□ 0.19
SREBF1-210ENST00000471445 LGALS14Q8TCE9 139 aa16.26■□□□□ 0.19
SREBF1-210ENST00000471445 ABHD5Q8WTS1 349 aa16.26■□□□□ 0.19
SREBF1-210ENST00000471445 GINS4Q9BRT9 223 aa16.26■□□□□ 0.19
SREBF1-210ENST00000471445 CENPOQ9BU64 300 aa16.26■□□□□ 0.19
SREBF1-210ENST00000471445 ZMAT5Q9UDW3 170 aaKnown RBP16.26■□□□□ 0.19
SREBF1-210ENST00000471445 DAPK2Q9UIK4 370 aa16.26■□□□□ 0.19
SREBF1-210ENST00000471445 RRP15Q9Y3B9 282 aaKnown RBP16.26■□□□□ 0.19
SREBF1-210ENST00000471445 A3GALT2U3KPV4 340 aa16.26■□□□□ 0.19
SREBF1-210ENST00000471445 SLC25A17O43808 307 aa16.25■□□□□ 0.19
SREBF1-210ENST00000471445 SCGNO76038 276 aa16.25■□□□□ 0.19
SREBF1-210ENST00000471445 IGLV2-23P01705 113 aa16.25■□□□□ 0.19
SREBF1-210ENST00000471445 OR8U8P0C7N1 319 aa16.25■□□□□ 0.19
SREBF1-210ENST00000471445 DGCR2P98153 550 aa16.25■□□□□ 0.19
SREBF1-210ENST00000471445 TMEM267Q0VDI3 215 aaPredicted RBP16.25■□□□□ 0.19
SREBF1-210ENST00000471445 KCTD21Q4G0X4 260 aa16.25■□□□□ 0.19
SREBF1-210ENST00000471445 AKIRIN2Q53H80 203 aa16.25■□□□□ 0.19
SREBF1-210ENST00000471445 PYHIN1Q6K0P9 492 aa16.25■□□□□ 0.19
SREBF1-210ENST00000471445 OR1N2Q8NGR9 330 aa16.25■□□□□ 0.19
SREBF1-210ENST00000471445 ARPC1AQ92747 370 aa16.25■□□□□ 0.19
SREBF1-210ENST00000471445 OR5B12Q96R08 314 aa16.25■□□□□ 0.19
SREBF1-210ENST00000471445 CLCC1Q96S66 551 aa16.25■□□□□ 0.19
SREBF1-210ENST00000471445 SEC14L6B5MCN3 397 aa16.24■□□□□ 0.19
SREBF1-210ENST00000471445 RAMP3O60896 148 aa16.24■□□□□ 0.19
SREBF1-210ENST00000471445 SDC2P34741 201 aa16.24■□□□□ 0.19
SREBF1-210ENST00000471445 SSBP2P81877 361 aaPredicted RBP16.24■□□□□ 0.19
SREBF1-210ENST00000471445 CDNFQ49AH0 187 aa16.24■□□□□ 0.19
SREBF1-210ENST00000471445 ACTBL2Q562R1 376 aa16.24■□□□□ 0.19
SREBF1-210ENST00000471445 HACD4Q5VWC8 232 aa16.24■□□□□ 0.19
SREBF1-210ENST00000471445 UNQ5815/PRO19632Q6UWF5 114 aa16.24■□□□□ 0.19
SREBF1-210ENST00000471445 CASTOR1Q8WTX7 329 aa16.24■□□□□ 0.19
SREBF1-210ENST00000471445 HARBI1Q96MB7 349 aa16.24■□□□□ 0.19
SREBF1-210ENST00000471445 TMEM235A6NFC5 223 aa16.23■□□□□ 0.19
SREBF1-210ENST00000471445 ARPC1BO15143 372 aaKnown RBP16.23■□□□□ 0.19
SREBF1-210ENST00000471445 CRYGBP07316 175 aa16.23■□□□□ 0.19
SREBF1-210ENST00000471445 TAGLNQ01995 201 aaKnown RBP16.23■□□□□ 0.19
SREBF1-210ENST00000471445 ZNF260Q3ZCT1 412 aa16.23■□□□□ 0.19
SREBF1-210ENST00000471445 TMEM177Q53S58 311 aa16.23■□□□□ 0.19
SREBF1-210ENST00000471445 LFNGQ8NES3 379 aa16.23■□□□□ 0.19
SREBF1-210ENST00000471445 NUDCD2Q8WVJ2 157 aa16.23■□□□□ 0.19
SREBF1-210ENST00000471445 DDB2Q92466 427 aa16.23■□□□□ 0.19
SREBF1-210ENST00000471445 RNF167Q9H6Y7 350 aa16.23■□□□□ 0.19
SREBF1-210ENST00000471445 RHBDL2Q9NX52 303 aa16.23■□□□□ 0.19
SREBF1-210ENST00000471445 RBM7Q9Y580 266 aaKnown RBP16.23■□□□□ 0.19
SREBF1-210ENST00000471445 LGALS1P09382 135 aaKnown RBP16.22■□□□□ 0.19
SREBF1-210ENST00000471445 CLEC2LP0C7M8 214 aa16.22■□□□□ 0.19
SREBF1-210ENST00000471445 LGALS7P47929 136 aa16.22■□□□□ 0.19
SREBF1-210ENST00000471445 SCAND1P57086 179 aa16.22■□□□□ 0.19
SREBF1-210ENST00000471445 MXD1Q05195 221 aa16.22■□□□□ 0.19
SREBF1-210ENST00000471445 DCTN2Q13561 401 aaKnown RBP16.22■□□□□ 0.19
SREBF1-210ENST00000471445 FXYD3Q14802 87 aa16.22■□□□□ 0.19
SREBF1-210ENST00000471445 NEDD8Q15843 81 aa16.22■□□□□ 0.19
SREBF1-210ENST00000471445 DEFB121Q5J5C9 76 aa16.22■□□□□ 0.19
SREBF1-210ENST00000471445 BVESQ8NE79 360 aa16.22■□□□□ 0.19
SREBF1-210ENST00000471445 ALX4Q9H161 411 aaPredicted RBP16.22■□□□□ 0.19
SREBF1-210ENST00000471445 DCSTAMPQ9H295 470 aa16.22■□□□□ 0.19
SREBF1-210ENST00000471445 SCOCQ9UIL1 159 aa16.22■□□□□ 0.19
SREBF1-210ENST00000471445 RRASP10301 218 aa16.21■□□□□ 0.19
SREBF1-210ENST00000471445 DUTP33316 252 aaKnown RBP16.21■□□□□ 0.19
SREBF1-210ENST00000471445 PITPNAQ00169 270 aa16.21■□□□□ 0.19
SREBF1-210ENST00000471445 CBX3Q13185 183 aa16.21■□□□□ 0.19
SREBF1-210ENST00000471445 RTL8BQ17RB0 113 aa16.21■□□□□ 0.19
SREBF1-210ENST00000471445 GRPEL2Q8TAA5 225 aa16.21■□□□□ 0.19
SREBF1-210ENST00000471445 SLC25A38Q96DW6 304 aa16.21■□□□□ 0.19
SREBF1-210ENST00000471445 ADTRPQ96IZ2 230 aa16.21■□□□□ 0.19
SREBF1-210ENST00000471445 ETV7Q9Y603 341 aa16.21■□□□□ 0.19
SREBF1-210ENST00000471445 LOC100506127A0A0U1RQW1 187 aa16.2■□□□□ 0.18
SREBF1-210ENST00000471445 CTXN2P0C2S0 81 aa16.2■□□□□ 0.18
SREBF1-210ENST00000471445 CD36P16671 472 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms