RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 LRBAP50851 2863 aa21.24■□□□□ 0.99
U2AF1-208ENST00000471250 USF3Q68DE3 2245 aa21.23■□□□□ 0.99
U2AF1-208ENST00000471250 MSGN1A6NI15 193 aa21.23■□□□□ 0.99
U2AF1-208ENST00000471250 RBFOX2O43251 390 aaKnown RBP eCLIP21.23■□□□□ 0.99
U2AF1-208ENST00000471250 FCGR3BO75015 233 aa21.23■□□□□ 0.99
U2AF1-208ENST00000471250 RBP4P02753 201 aa21.23■□□□□ 0.99
U2AF1-208ENST00000471250 COX6B1P14854 86 aa21.23■□□□□ 0.99
U2AF1-208ENST00000471250 CXorf66Q5JRM2 361 aaPredicted RBP21.23■□□□□ 0.99
U2AF1-208ENST00000471250 NARFLQ9H6Q4 476 aa21.23■□□□□ 0.99
U2AF1-208ENST00000471250 J3QR06 171 aa21.22■□□□□ 0.99
U2AF1-208ENST00000471250 BCL2L11O43521 198 aa21.22■□□□□ 0.99
U2AF1-208ENST00000471250 IGHV4-39P01824 125 aa21.22■□□□□ 0.99
U2AF1-208ENST00000471250 P0C879 139 aa21.22■□□□□ 0.99
U2AF1-208ENST00000471250 IZUMO4Q1ZYL8 232 aa21.22■□□□□ 0.99
U2AF1-208ENST00000471250 DMBX1Q8NFW5 382 aa21.22■□□□□ 0.99
U2AF1-208ENST00000471250 SSBP3Q9BWW4 388 aaPredicted RBP21.22■□□□□ 0.99
U2AF1-208ENST00000471250 TMEM133Q9H2Q1 129 aa21.22■□□□□ 0.99
U2AF1-208ENST00000471250 ZNRD1Q9P1U0 126 aa21.22■□□□□ 0.99
U2AF1-208ENST00000471250 CACNG5Q9UF02 275 aa21.22■□□□□ 0.99
U2AF1-208ENST00000471250 KANTRA0A1W2PQU2 76 aa21.21■□□□□ 0.99
U2AF1-208ENST00000471250 C22orf46C9J442 243 aa21.21■□□□□ 0.99
U2AF1-208ENST00000471250 HPRT1P00492 218 aa21.21■□□□□ 0.99
U2AF1-208ENST00000471250 HKR1P10072 659 aa21.21■□□□□ 0.99
U2AF1-208ENST00000471250 G6PCP35575 357 aa21.21■□□□□ 0.99
U2AF1-208ENST00000471250 OR9G1Q8NH87 305 aa21.21■□□□□ 0.99
U2AF1-208ENST00000471250 C11orf1Q9H5F2 150 aa21.21■□□□□ 0.99
U2AF1-208ENST00000471250 PLEKHA2Q9HB19 425 aa21.21■□□□□ 0.99
U2AF1-208ENST00000471250 MALRD1Q5VYJ5 2156 aa21.21■□□□□ 0.99
U2AF1-208ENST00000471250 USP9XQ93008 2570 aaPredicted RBP21.21■□□□□ 0.99
U2AF1-208ENST00000471250 KRASP01116 189 aa21.21■□□□□ 0.99
U2AF1-208ENST00000471250 LIPFP07098 398 aa21.21■□□□□ 0.99
U2AF1-208ENST00000471250 ZNF833PQ6ZTB9 187 aa21.21■□□□□ 0.99
U2AF1-208ENST00000471250 SLC51BQ86UW2 128 aa21.21■□□□□ 0.99
U2AF1-208ENST00000471250 ZNF525Q8N782 197 aa21.21■□□□□ 0.99
U2AF1-208ENST00000471250 ZNF680Q8NEM1 530 aa21.21■□□□□ 0.99
U2AF1-208ENST00000471250 COA4Q9NYJ1 87 aa21.21■□□□□ 0.99
U2AF1-208ENST00000471250 KIAA1324LA8MWY0 1029 aaPredicted RBP21.2■□□□□ 0.98
U2AF1-208ENST00000471250 P2RY1P47900 373 aa21.2■□□□□ 0.98
U2AF1-208ENST00000471250 POLR2GP62487 172 aaKnown RBP eCLIP21.2■□□□□ 0.98
U2AF1-208ENST00000471250 ABHD12Q8N2K0 398 aa21.2■□□□□ 0.98
U2AF1-208ENST00000471250 ZNF383Q8NA42 475 aa21.2■□□□□ 0.98
U2AF1-208ENST00000471250 CFDP00746 253 aaPredicted RBP21.19■□□□□ 0.98
U2AF1-208ENST00000471250 RPL12P30050 165 aaKnown RBP21.19■□□□□ 0.98
U2AF1-208ENST00000471250 PDLIM4P50479 330 aa21.19■□□□□ 0.98
U2AF1-208ENST00000471250 ARPC5LQ9BPX5 153 aa21.19■□□□□ 0.98
U2AF1-208ENST00000471250 LOC105371242A0A075B767 164 aa21.18■□□□□ 0.98
U2AF1-208ENST00000471250 A1L4Q6 167 aa21.18■□□□□ 0.98
U2AF1-208ENST00000471250 MMP9P14780 707 aa21.18■□□□□ 0.98
U2AF1-208ENST00000471250 FAM71F2Q6NXP2 309 aa21.18■□□□□ 0.98
U2AF1-208ENST00000471250 MAGT1Q9H0U3 335 aa21.18■□□□□ 0.98
U2AF1-208ENST00000471250 IFNA7P01567 189 aa21.18■□□□□ 0.98
U2AF1-208ENST00000471250 IGHV2-5P01817 119 aa21.18■□□□□ 0.98
U2AF1-208ENST00000471250 CT45A6P0DMU7 189 aa21.18■□□□□ 0.98
U2AF1-208ENST00000471250 CT45A5P0DMU8 189 aa21.18■□□□□ 0.98
U2AF1-208ENST00000471250 CT45A7P0DMV0 189 aa21.18■□□□□ 0.98
U2AF1-208ENST00000471250 PVALBP20472 110 aaPredicted RBP21.18■□□□□ 0.98
U2AF1-208ENST00000471250 MIDNQ504T8 468 aa21.18■□□□□ 0.98
U2AF1-208ENST00000471250 OR10X1Q8NGY0 326 aa21.18■□□□□ 0.98
U2AF1-208ENST00000471250 OR4S2Q8NH73 311 aa21.18■□□□□ 0.98
U2AF1-208ENST00000471250 TNFRSF14Q92956 283 aa21.18■□□□□ 0.98
U2AF1-208ENST00000471250 TMEM186Q96B77 213 aa21.18■□□□□ 0.98
U2AF1-208ENST00000471250 R3HDM4Q96D70 268 aa21.18■□□□□ 0.98
U2AF1-208ENST00000471250 hCG_1809904A0A1W2PP81 198 aa21.17■□□□□ 0.98
U2AF1-208ENST00000471250 A0A1W2PPE2 198 aa21.17■□□□□ 0.98
U2AF1-208ENST00000471250 A0A1W2PR64 198 aa21.17■□□□□ 0.98
U2AF1-208ENST00000471250 A0A1W2PRV1 198 aa21.17■□□□□ 0.98
U2AF1-208ENST00000471250 H2BFWTQ7Z2G1 175 aa21.17■□□□□ 0.98
U2AF1-208ENST00000471250 ARID1AO14497 2285 aa21.16■□□□□ 0.98
U2AF1-208ENST00000471250 MARCH11A6NNE9 402 aa21.16■□□□□ 0.98
U2AF1-208ENST00000471250 NXPH3O95157 252 aa21.16■□□□□ 0.98
U2AF1-208ENST00000471250 ZNF137PP52743 207 aa21.16■□□□□ 0.98
U2AF1-208ENST00000471250 EXOSC2Q13868 293 aaKnown RBP21.16■□□□□ 0.98
U2AF1-208ENST00000471250 GPR157Q5UAW9 335 aa21.16■□□□□ 0.98
U2AF1-208ENST00000471250 BPESC1Q9GZL8 116 aa21.16■□□□□ 0.98
U2AF1-208ENST00000471250 ONECUT1Q9UBC0 465 aa21.16■□□□□ 0.98
U2AF1-208ENST00000471250 UBR5O95071 2799 aaPredicted RBP21.16■□□□□ 0.98
U2AF1-208ENST00000471250 FLNCQ14315 2725 aa21.16■□□□□ 0.98
U2AF1-208ENST00000471250 IGHV2-26A0A0B4J1V2 119 aa21.15■□□□□ 0.98
U2AF1-208ENST00000471250 WRBO00258 174 aa21.15■□□□□ 0.98
U2AF1-208ENST00000471250 TOR1AO14656 332 aa21.15■□□□□ 0.98
U2AF1-208ENST00000471250 SSSCA1O60232 199 aa21.15■□□□□ 0.98
U2AF1-208ENST00000471250 GPR137BO60478 399 aa21.15■□□□□ 0.98
U2AF1-208ENST00000471250 UBA52P62987 128 aaKnown RBP21.15■□□□□ 0.98
U2AF1-208ENST00000471250 ST6GALNAC6Q969X2 333 aa21.15■□□□□ 0.98
U2AF1-208ENST00000471250 ZC4H2Q9NQZ6 224 aa21.15■□□□□ 0.98
U2AF1-208ENST00000471250 FAM90A26D6RGX4 464 aa21.15■□□□□ 0.98
U2AF1-208ENST00000471250 CHST1O43916 411 aa21.15■□□□□ 0.98
U2AF1-208ENST00000471250 VAMP2P63027 116 aa21.15■□□□□ 0.98
U2AF1-208ENST00000471250 DCHS2Q6V1P9 2916 aa21.14■□□□□ 0.97
U2AF1-208ENST00000471250 M0R1W7 72 aa21.14■□□□□ 0.97
U2AF1-208ENST00000471250 NQO2P16083 231 aa21.14■□□□□ 0.97
U2AF1-208ENST00000471250 PRRX1P54821 245 aa21.14■□□□□ 0.97
U2AF1-208ENST00000471250 ZNF295-AS1Q8N0V1 137 aa21.14■□□□□ 0.97
U2AF1-208ENST00000471250 Q8N7P7 452 aa21.14■□□□□ 0.97
U2AF1-208ENST00000471250 ZNF471Q9BX82 626 aaPredicted RBP21.14■□□□□ 0.97
U2AF1-208ENST00000471250 CLEC7AQ9BXN2 247 aa21.14■□□□□ 0.97
U2AF1-208ENST00000471250 MRPL20Q9BYC9 149 aaKnown RBP21.14■□□□□ 0.97
U2AF1-208ENST00000471250 CYTL1Q9NRR1 136 aa21.14■□□□□ 0.97
U2AF1-208ENST00000471250 CTNNBIP1Q9NSA3 81 aaPredicted RBP21.14■□□□□ 0.97
U2AF1-208ENST00000471250 UBQLN2Q9UHD9 624 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms