RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 DGUOKQ16854 277 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 C17orf58Q2M2W7 97 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 CEACAM21Q3KPI0 293 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 C2orf76Q3KRA6 126 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 METTL11BQ5VVY1 283 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 ZNF544Q6NX49 715 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 SFXN4Q6P4A7 337 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 GLIPR1L1Q6UWM5 242 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 LAX1Q8IWV1 398 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 OR8H3Q8N146 312 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 BPIFB2Q8N4F0 458 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 OR13G1Q8NGZ3 307 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 DYNC2LI1Q8TCX1 351 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 MAFIPQ8WZ33 124 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 ITFG2Q969R8 447 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 CREB3L1Q96BA8 519 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 SLC25A38Q96DW6 304 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 C14orf79Q96F83 325 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 BORCS8Q96FH0 119 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 MRPL48Q96GC5 212 aaKnown RBP2.96□□□□□ -1.94
COL9A1-206ENST00000470652 S1PR3Q99500 378 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 GPER1Q99527 375 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 CCL13Q99616 98 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 BPESC1Q9GZL8 116 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 CXXC4Q9H2H0 198 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 RGCCQ9H4X1 137 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 VCX3AQ9NNX9 186 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 ZNRD1Q9P1U0 126 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 OR5V1Q9UGF6 321 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 RSL24D1Q9UHA3 163 aaKnown RBP2.96□□□□□ -1.94
COL9A1-206ENST00000470652 SSR3Q9UNL2 185 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 ZNF256Q9Y2P7 627 aaPredicted RBP2.96□□□□□ -1.94
COL9A1-206ENST00000470652 GSTK1Q9Y2Q3 226 aa2.96□□□□□ -1.94
COL9A1-206ENST00000470652 TLN2Q9Y4G6 2542 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 ABCA1O95477 2261 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 IGKV1D-8A0A087WSZ0 117 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 A0A096LNT2 108 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 IGHV1-69-2A0A0G2JMI3 117 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 RFPL4AA6NLU0 287 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 IFITM5A6NNB3 132 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 RFPL4AL1F8VTS6 287 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 J3QT63 122 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 GEMIN2O14893 280 aaKnown RBP2.95□□□□□ -1.94
COL9A1-206ENST00000470652 SLC22A1O15245 554 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 PPIHO43447 177 aaKnown RBP2.95□□□□□ -1.94
COL9A1-206ENST00000470652 CRTAPO75718 401 aaPredicted RBP2.95□□□□□ -1.94
COL9A1-206ENST00000470652 GATBO75879 557 aaKnown RBP2.95□□□□□ -1.94
COL9A1-206ENST00000470652 CLPXO76031 633 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 LHBP01229 141 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 IGHV3-7P01780 117 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 APOC1P02654 83 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 CD2P06729 351 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 CD55P08174 381 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 FCGR3AP08637 254 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 CD3GP09693 182 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 OCMP0CE72 109 aaPredicted RBP2.95□□□□□ -1.94
COL9A1-206ENST00000470652 PGA5P0DJD9 388 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 PSG2P11465 335 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 ELK1P19419 428 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 RAB3BP20337 219 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 MYL9P24844 172 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 PTGFRP43088 359 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 GABRA2P47869 451 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 RBP2P50120 134 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 PPOXP50336 477 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 RPS23P62266 143 aaKnown RBP2.95□□□□□ -1.94
COL9A1-206ENST00000470652 PPP3R1P63098 170 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 MRPL28Q13084 256 aaKnown RBP2.95□□□□□ -1.94
COL9A1-206ENST00000470652 EDDM3AQ14507 147 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 ATXN7L3Q14CW9 347 aaPredicted RBP2.95□□□□□ -1.94
COL9A1-206ENST00000470652 RAB11BQ15907 218 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 DEFB113Q30KQ7 82 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 ANKRD55Q3KP44 614 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 C1orf100Q5SVJ3 147 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 Q6P435 159 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 ACP7Q6ZNF0 438 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 UTS2BQ765I0 119 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 TCF23Q7RTU1 214 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 PDZD9Q8IXQ8 264 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 PNKDQ8N490 385 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 C11orf42Q8N5U0 333 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 MS4A15Q8N5U1 240 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 Q8N7P7 452 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 OR4S1Q8NGB4 309 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 OR4M1Q8NGD0 313 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 OR5A2Q8NGI9 324 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 OR51F2Q8NH61 342 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 ZNF671Q8TAW3 534 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 PLPPR1Q8TBJ4 325 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 RDH5Q92781 318 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 EMG1Q92979 244 aaKnown RBP2.95□□□□□ -1.94
COL9A1-206ENST00000470652 SLC25A46Q96AG3 418 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 FAM3DQ96BQ1 224 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 KCTD7Q96MP8 289 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 GAFA1Q96PS6 74 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 MICU1Q9BPX6 476 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 NRIP2Q9BQI9 281 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 TMEM246Q9BRR3 403 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 RTL8AQ9BWD3 113 aa2.95□□□□□ -1.94
COL9A1-206ENST00000470652 SELENOIQ9C0D9 397 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms