RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 HPRT1P00492 218 aa6.68□□□□□ -1.34
SMC4-212ENST00000470240 IRF2P14316 349 aa6.68□□□□□ -1.34
SMC4-212ENST00000470240 FGF7P21781 194 aa6.68□□□□□ -1.34
SMC4-212ENST00000470240 G6PCP35575 357 aa6.68□□□□□ -1.34
SMC4-212ENST00000470240 CFHR2P36980 270 aa6.68□□□□□ -1.34
SMC4-212ENST00000470240 AKR1C3P42330 323 aa6.68□□□□□ -1.34
SMC4-212ENST00000470240 PSMB3P49720 205 aa6.68□□□□□ -1.34
SMC4-212ENST00000470240 ZNF83P51522 516 aa6.68□□□□□ -1.34
SMC4-212ENST00000470240 ELLP55199 621 aaPredicted RBP6.68□□□□□ -1.34
SMC4-212ENST00000470240 RAB11AP62491 216 aa6.68□□□□□ -1.34
SMC4-212ENST00000470240 KRTCAP3Q53RY4 240 aa6.68□□□□□ -1.34
SMC4-212ENST00000470240 OR2B11Q5JQS5 317 aa6.68□□□□□ -1.34
SMC4-212ENST00000470240 PRAMEF5Q5TYX0 476 aa6.68□□□□□ -1.34
SMC4-212ENST00000470240 OR8G2PQ6IF36 304 aa6.68□□□□□ -1.34
SMC4-212ENST00000470240 IGFL3Q6UXB1 125 aa6.68□□□□□ -1.34
SMC4-212ENST00000470240 TMEM14EPQ6UXP3 125 aa6.68□□□□□ -1.34
SMC4-212ENST00000470240 ZFP82Q8N141 532 aa6.68□□□□□ -1.34
SMC4-212ENST00000470240 GCSAMQ8N6F7 178 aa6.68□□□□□ -1.34
SMC4-212ENST00000470240 OR4A16Q8NH70 328 aa6.68□□□□□ -1.34
SMC4-212ENST00000470240 TAF15Q92804 592 aaKnown RBP eCLIP6.68□□□□□ -1.347e-26■■■■□ 25.9
SMC4-212ENST00000470240 LHX4Q969G2 390 aa6.68□□□□□ -1.34
SMC4-212ENST00000470240 STARD4Q96DR4 205 aa6.68□□□□□ -1.34
SMC4-212ENST00000470240 MALSU1Q96EH3 234 aa6.68□□□□□ -1.34
SMC4-212ENST00000470240 COQ2Q96H96 371 aa6.68□□□□□ -1.34
SMC4-212ENST00000470240 ADTRPQ96IZ2 230 aa6.68□□□□□ -1.34
SMC4-212ENST00000470240 S1PR3Q99500 378 aa6.68□□□□□ -1.34
SMC4-212ENST00000470240 RARRES2Q99969 163 aa6.68□□□□□ -1.34
SMC4-212ENST00000470240 KRTAP4-12Q9BQ66 201 aa6.68□□□□□ -1.34
SMC4-212ENST00000470240 RSG1Q9BU20 258 aa6.68□□□□□ -1.34
SMC4-212ENST00000470240 SCRT1Q9BWW7 348 aa6.68□□□□□ -1.34
SMC4-212ENST00000470240 MRPL37Q9BZE1 423 aaKnown RBP6.68□□□□□ -1.34
SMC4-212ENST00000470240 MAP1LC3BQ9GZQ8 125 aa6.68□□□□□ -1.34
SMC4-212ENST00000470240 NCOR1P1Q9H4R4 102 aa6.68□□□□□ -1.34
SMC4-212ENST00000470240 ENY2Q9NPA8 101 aa6.68□□□□□ -1.34
SMC4-212ENST00000470240 FZR1Q9UM11 496 aa6.68□□□□□ -1.34
SMC4-212ENST00000470240 PSG11Q9UQ72 335 aa6.68□□□□□ -1.34
SMC4-212ENST00000470240 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.68□□□□□ -1.34
SMC4-212ENST00000470240 ARID1AO14497 2285 aa6.67□□□□□ -1.34
SMC4-212ENST00000470240 DOCK7Q96N67 2140 aa6.67□□□□□ -1.34
SMC4-212ENST00000470240 XIRP2A4UGR9 3374 aa6.67□□□□□ -1.34
SMC4-212ENST00000470240 CTXND1A0A1B0GTU2 59 aa6.67□□□□□ -1.34
SMC4-212ENST00000470240 A0A1B0GWJ7 208 aa6.67□□□□□ -1.34
SMC4-212ENST00000470240 MEX3AA1L020 520 aaKnown RBP6.67□□□□□ -1.34
SMC4-212ENST00000470240 NKX6-3A6NJ46 265 aa6.67□□□□□ -1.34
SMC4-212ENST00000470240 VSTM5A8MXK1 200 aa6.67□□□□□ -1.34
SMC4-212ENST00000470240 SRRM5B3KS81 715 aa6.67□□□□□ -1.34
SMC4-212ENST00000470240 CYB5BO43169 146 aa6.67□□□□□ -1.34
SMC4-212ENST00000470240 RBFOX2O43251 390 aaKnown RBP eCLIP6.67□□□□□ -1.343e-8■■■■■ 54.1
SMC4-212ENST00000470240 YPEL1O60688 119 aa6.67□□□□□ -1.34
SMC4-212ENST00000470240 MPDU1O75352 247 aa6.67□□□□□ -1.34
SMC4-212ENST00000470240 TNFSF13O75888 250 aa6.67□□□□□ -1.34
SMC4-212ENST00000470240 S1PR2O95136 353 aa6.67□□□□□ -1.34
SMC4-212ENST00000470240 PTBP3O95758 552 aaKnown RBP6.67□□□□□ -1.34
SMC4-212ENST00000470240 CGAP01215 116 aa6.67□□□□□ -1.34
SMC4-212ENST00000470240 TIMP3P35625 211 aa6.67□□□□□ -1.34
SMC4-212ENST00000470240 GLRXP35754 106 aa6.67□□□□□ -1.34
SMC4-212ENST00000470240 GLIPR1P48060 266 aa6.67□□□□□ -1.34
SMC4-212ENST00000470240 IZUMO4Q1ZYL8 232 aa6.67□□□□□ -1.34
SMC4-212ENST00000470240 ACOT6Q3I5F7 207 aaPredicted RBP6.67□□□□□ -1.34
SMC4-212ENST00000470240 LCN15Q6UWW0 184 aa6.67□□□□□ -1.34
SMC4-212ENST00000470240 BTNL3Q6UXE8 466 aa6.67□□□□□ -1.34
SMC4-212ENST00000470240 Q6ZRM9 215 aa6.67□□□□□ -1.34
SMC4-212ENST00000470240 C11orf53Q8IXP5 236 aa6.67□□□□□ -1.34
SMC4-212ENST00000470240 CYB561D1Q8N8Q1 229 aa6.67□□□□□ -1.34
SMC4-212ENST00000470240 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.67□□□□□ -1.34
SMC4-212ENST00000470240 OR4S2Q8NH73 311 aa6.67□□□□□ -1.34
SMC4-212ENST00000470240 C2CD4CQ8TF44 421 aa6.67□□□□□ -1.34
SMC4-212ENST00000470240 R3HDM4Q96D70 268 aa6.67□□□□□ -1.34
SMC4-212ENST00000470240 RAB39BQ96DA2 213 aa6.67□□□□□ -1.34
SMC4-212ENST00000470240 RCC1LQ96I51 464 aaKnown RBP6.67□□□□□ -1.34
SMC4-212ENST00000470240 YPEL2Q96QA6 119 aa6.67□□□□□ -1.34
SMC4-212ENST00000470240 OR4C12Q96R67 309 aa6.67□□□□□ -1.34
SMC4-212ENST00000470240 ZNF251Q9BRH9 671 aa6.67□□□□□ -1.34
SMC4-212ENST00000470240 PARD6AQ9NPB6 346 aa6.67□□□□□ -1.34
SMC4-212ENST00000470240 RPRMQ9NS64 109 aa6.67□□□□□ -1.34
SMC4-212ENST00000470240 PCNX2A6NKB5 2137 aa6.67□□□□□ -1.34
SMC4-212ENST00000470240 TRGV10A0A0A0MS01 117 aa6.66□□□□□ -1.34
SMC4-212ENST00000470240 A0A1W2PPE2 198 aa6.66□□□□□ -1.34
SMC4-212ENST00000470240 MARCH11A6NNE9 402 aa6.66□□□□□ -1.34
SMC4-212ENST00000470240 C17orf98A8MV24 154 aa6.66□□□□□ -1.34
SMC4-212ENST00000470240 MKRN2OSH3BPM6 223 aa6.66□□□□□ -1.34
SMC4-212ENST00000470240 M0R1X1 148 aa6.66□□□□□ -1.34
SMC4-212ENST00000470240 ITGB1BP1O14713 200 aa6.66□□□□□ -1.34
SMC4-212ENST00000470240 ZNF737O75373 536 aa6.66□□□□□ -1.34
SMC4-212ENST00000470240 IGHV3-13P01766 116 aa6.66□□□□□ -1.34
SMC4-212ENST00000470240 SMIM6P0DI80 62 aa6.66□□□□□ -1.34
SMC4-212ENST00000470240 AGAP20933 346 aa6.66□□□□□ -1.34
SMC4-212ENST00000470240 MAS1LP35410 378 aa6.66□□□□□ -1.34
SMC4-212ENST00000470240 RPS10P46783 165 aaKnown RBP6.66□□□□□ -1.34
SMC4-212ENST00000470240 EDDM3BP56851 147 aa6.66□□□□□ -1.34
SMC4-212ENST00000470240 OR2B8PP59922 312 aa6.66□□□□□ -1.34
SMC4-212ENST00000470240 SPCS3P61009 180 aa6.66□□□□□ -1.34
SMC4-212ENST00000470240 CCL20P78556 96 aa6.66□□□□□ -1.34
SMC4-212ENST00000470240 DLK1P80370 383 aa6.66□□□□□ -1.34
SMC4-212ENST00000470240 S100A12P80511 92 aa6.66□□□□□ -1.34
SMC4-212ENST00000470240 TNFAIP6P98066 277 aaPredicted RBP6.66□□□□□ -1.34
SMC4-212ENST00000470240 FOXF2Q12947 444 aa6.66□□□□□ -1.34
SMC4-212ENST00000470240 SRSF6Q13247 344 aaKnown RBP6.66□□□□□ -1.34
SMC4-212ENST00000470240 RAB31Q13636 194 aa6.66□□□□□ -1.34
SMC4-212ENST00000470240 PMS2P11Q13670 270 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms